RNA–Protein interactions for RNA: ENST00000390996.1

RNU6-1009P-201, Transcript of RNA, U6 small nuclear 1009, pseudogene, humanhuman

BASIC

Gene RNU6-1009P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1009P-201ENST00000390996 ERVK-19Q9WJR5 959 aa1.24□□□□□ -2.21
RNU6-1009P-201ENST00000390996 SLCO1B1Q9Y6L6 691 aa1.24□□□□□ -2.21
RNU6-1009P-201ENST00000390996 ARHGAP21Q5T5U3 1957 aa1.24□□□□□ -2.21
RNU6-1009P-201ENST00000390996 PLEKHG1Q9ULL1 1385 aa1.23□□□□□ -2.21
RNU6-1009P-201ENST00000390996 TMX2-CTNND1H3BSU7 103 aa1.23□□□□□ -2.21
RNU6-1009P-201ENST00000390996 MED6O75586 246 aa1.23□□□□□ -2.21
RNU6-1009P-201ENST00000390996 IGHV4-34P06331 123 aa1.23□□□□□ -2.21
RNU6-1009P-201ENST00000390996 ZNF286BP0CG31 522 aa1.23□□□□□ -2.21
RNU6-1009P-201ENST00000390996 CD1BP29016 333 aa1.23□□□□□ -2.21
RNU6-1009P-201ENST00000390996 ACVR1BP36896 505 aa1.23□□□□□ -2.21
RNU6-1009P-201ENST00000390996 METAP1P53582 386 aa1.23□□□□□ -2.21
RNU6-1009P-201ENST00000390996 RAD23AP54725 363 aa1.23□□□□□ -2.21
RNU6-1009P-201ENST00000390996 TIMM10P62072 90 aa1.23□□□□□ -2.21
RNU6-1009P-201ENST00000390996 ACKR1Q16570 336 aa1.23□□□□□ -2.21
RNU6-1009P-201ENST00000390996 TWISTNBQ3B726 338 aaPredicted RBP1.23□□□□□ -2.21
RNU6-1009P-201ENST00000390996 SLFN11Q7Z7L1 901 aa1.23□□□□□ -2.21
RNU6-1009P-201ENST00000390996 PPP1R27Q86WC6 154 aa1.23□□□□□ -2.21
RNU6-1009P-201ENST00000390996 LINC00518Q8N0U6 118 aa1.23□□□□□ -2.21
RNU6-1009P-201ENST00000390996 ZNF596Q8TC21 504 aa1.23□□□□□ -2.21
RNU6-1009P-201ENST00000390996 TAF4BQ92750 862 aa1.23□□□□□ -2.21
RNU6-1009P-201ENST00000390996 C18orf25Q96B23 403 aaPredicted RBP1.23□□□□□ -2.21
RNU6-1009P-201ENST00000390996 ZNF578Q96N58 590 aaPredicted RBP1.23□□□□□ -2.21
RNU6-1009P-201ENST00000390996 MBOAT4Q96T53 435 aa1.23□□□□□ -2.21
RNU6-1009P-201ENST00000390996 CHMP4AQ9BY43 222 aa1.23□□□□□ -2.21
RNU6-1009P-201ENST00000390996 DCTPP1Q9H773 170 aa1.23□□□□□ -2.21
RNU6-1009P-201ENST00000390996 APMAPQ9HDC9 416 aa1.23□□□□□ -2.21
RNU6-1009P-201ENST00000390996 TRMT6Q9UJA5 497 aaKnown RBP1.23□□□□□ -2.21
RNU6-1009P-201ENST00000390996 COL5A1P20908 1838 aaPredicted RBP1.23□□□□□ -2.21
RNU6-1009P-201ENST00000390996 A0A0U1RQS6 177 aa1.22□□□□□ -2.21
RNU6-1009P-201ENST00000390996 YJEFN3A6XGL0 299 aa1.22□□□□□ -2.21
RNU6-1009P-201ENST00000390996 IMPA2O14732 288 aa1.22□□□□□ -2.21
RNU6-1009P-201ENST00000390996 NBR2O15453 112 aa1.22□□□□□ -2.21
RNU6-1009P-201ENST00000390996 SIX3O95343 332 aaPredicted RBP1.22□□□□□ -2.21
RNU6-1009P-201ENST00000390996 TXNDC12O95881 172 aa1.22□□□□□ -2.21
RNU6-1009P-201ENST00000390996 MMP1P03956 469 aa1.22□□□□□ -2.21
RNU6-1009P-201ENST00000390996 TPBGLP0DKB5 382 aa1.22□□□□□ -2.21
RNU6-1009P-201ENST00000390996 HTR1EP28566 365 aa1.22□□□□□ -2.21
RNU6-1009P-201ENST00000390996 CCND3P30281 292 aaPredicted RBP1.22□□□□□ -2.21
RNU6-1009P-201ENST00000390996 RPL32P62910 135 aaKnown RBP1.22□□□□□ -2.21
RNU6-1009P-201ENST00000390996 CDKL1Q00532 357 aa1.22□□□□□ -2.21
RNU6-1009P-201ENST00000390996 OTUD4Q01804 1114 aaKnown RBP1.22□□□□□ -2.21
RNU6-1009P-201ENST00000390996 PUDPQ08623 228 aa1.22□□□□□ -2.21
RNU6-1009P-201ENST00000390996 IL18R1Q13478 541 aa1.22□□□□□ -2.21
RNU6-1009P-201ENST00000390996 KLF5Q13887 457 aaPredicted RBP1.22□□□□□ -2.21
RNU6-1009P-201ENST00000390996 RPUSD3Q6P087 351 aaKnown RBP1.22□□□□□ -2.21
RNU6-1009P-201ENST00000390996 PODNL1Q6PEZ8 512 aa1.22□□□□□ -2.21
RNU6-1009P-201ENST00000390996 ATRAIDQ6UW56 229 aa1.22□□□□□ -2.21
RNU6-1009P-201ENST00000390996 SPATA19Q7Z5L4 167 aa1.22□□□□□ -2.21
RNU6-1009P-201ENST00000390996 KRT77Q7Z794 578 aa1.22□□□□□ -2.21
RNU6-1009P-201ENST00000390996 ZNF615Q8N8J6 731 aa1.22□□□□□ -2.21
RNU6-1009P-201ENST00000390996 TRAF3IP1Q8TDR0 691 aaPredicted RBP1.22□□□□□ -2.21
RNU6-1009P-201ENST00000390996 DNASE1L2Q92874 299 aa1.22□□□□□ -2.21
RNU6-1009P-201ENST00000390996 NEIL2Q969S2 332 aa1.22□□□□□ -2.21
RNU6-1009P-201ENST00000390996 ULK4Q96C45 1275 aa1.22□□□□□ -2.21
RNU6-1009P-201ENST00000390996 COG3Q96JB2 828 aa1.22□□□□□ -2.21
RNU6-1009P-201ENST00000390996 FOPNLQ96NB1 174 aa1.22□□□□□ -2.21
RNU6-1009P-201ENST00000390996 NUDT16L1Q9BRJ7 211 aaKnown RBP1.22□□□□□ -2.21
RNU6-1009P-201ENST00000390996 RABEP2Q9H5N1 569 aa1.22□□□□□ -2.21
RNU6-1009P-201ENST00000390996 ZNF835Q9Y2P0 537 aa1.22□□□□□ -2.21
RNU6-1009P-201ENST00000390996 NPIPA5A0A0B4J1W7 369 aa1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 NPIPA5E9PKD4 350 aa1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 C11orf98E9PRG8 122 aa1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 ST8SIA3O43173 380 aa1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 NPIPB7O75200 414 aa1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 RLN1P04808 185 aa1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 CYP3A5P20815 502 aa1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 CCNCP24863 283 aa1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 PTBP1P26599 531 aaKnown RBP eCLIP1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 HOXD10P28358 340 aa1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 CDH5P33151 784 aaPredicted RBP1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 GP5P40197 560 aa1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 PRKCIP41743 596 aa1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 LHX2P50458 406 aa1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 TNFSF10P50591 281 aa1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 GPC3P51654 580 aa1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 CAPZA1P52907 286 aa1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 OC90Q02509 493 aaPredicted RBP1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 CSTF1Q05048 431 aaKnown RBP1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 ARHGAP1Q07960 439 aa1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 MADCAM1Q13477 382 aa1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 KRTAP6-3Q3LI67 103 aa1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 KRTAP13-2Q52LG2 175 aa1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 METTL11BQ5VVY1 283 aa1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 FAM71E1Q6IPT2 247 aa1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 CASC4Q6P4E1 433 aa1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 KRT74Q7RTS7 529 aa1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 PIWIL3Q7Z3Z3 882 aaKnown RBP1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 ZNF429Q86V71 674 aa1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 AQP12AQ8IXF9 295 aa1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 CERS5Q8N5B7 392 aa1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 ALLCQ8N6M5 410 aa1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 OR4L1Q8NH43 312 aa1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 UBTD2Q8WUN7 234 aa1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 C11orf24Q96F05 449 aaPredicted RBP1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 FERMT1Q9BQL6 677 aa1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 TXLNGYQ9BZA5 131 aa1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 NMNAT2Q9BZQ4 307 aa1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 MRTO4Q9UKD2 239 aaKnown RBP1.21□□□□□ -2.22
RNU6-1009P-201ENST00000390996 KIF26AQ9ULI4 1882 aaPredicted RBP1.2□□□□□ -2.22
RNU6-1009P-201ENST00000390996 A0A096LNJ9 63 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms