RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 SLC35A5Q9BS91 424 aa10.88□□□□□ -0.67
USF1-201ENST00000368019 DDX28Q9NUL7 540 aaKnown RBP10.88□□□□□ -0.67
USF1-201ENST00000368019 MRPS18AQ9NVS2 196 aaKnown RBP10.88□□□□□ -0.67
USF1-201ENST00000368019 RLIMQ9NVW2 624 aa10.88□□□□□ -0.67
USF1-201ENST00000368019 GPATCH2Q9NW75 528 aa10.88□□□□□ -0.67
USF1-201ENST00000368019 GULP1Q9UBP9 304 aa10.88□□□□□ -0.67
USF1-201ENST00000368019 CAB39Q9Y376 341 aaPredicted RBP10.88□□□□□ -0.67
USF1-201ENST00000368019 MGAQ8IWI9 3026 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 NPIPB15A6NHN6 443 aaPredicted RBP10.87□□□□□ -0.67
USF1-201ENST00000368019 LRRC72A6NJI9 287 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 SGTAO43765 313 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 PCDH7O60245 1069 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 CATP04040 527 aaKnown RBP10.87□□□□□ -0.67
USF1-201ENST00000368019 C1SP09871 688 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 FURINP09958 794 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 HSMCR30P0CW71 290 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 CKMT1AP12532 417 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 CPEP16870 476 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 ZNF8P17098 575 aaPredicted RBP10.87□□□□□ -0.67
USF1-201ENST00000368019 C5AR1P21730 350 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 CPN2P22792 545 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 CFL1P23528 166 aaKnown RBP10.87□□□□□ -0.67
USF1-201ENST00000368019 CD38P28907 300 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 GSTM5P46439 218 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 SLC9A3P48764 834 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 SPINT3P49223 89 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 VASPP50552 380 aaPredicted RBP10.87□□□□□ -0.67
USF1-201ENST00000368019 NKX2-5P52952 324 aaPredicted RBP10.87□□□□□ -0.67
USF1-201ENST00000368019 ADPRHP54922 357 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 SEMG2Q02383 582 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 COX10Q12887 443 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 HYAL2Q12891 473 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 TBRG1Q3YBR2 411 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 ATP13A5Q4VNC0 1218 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 GPAT3Q53EU6 434 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 SLC35F1Q5T1Q4 408 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 MED27Q6P2C8 311 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 AGTRAPQ6RW13 159 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 SPATC1Q76KD6 591 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 VASH1Q7L8A9 365 aaPredicted RBP10.87□□□□□ -0.67
USF1-201ENST00000368019 KANSL1Q7Z3B3 1105 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 RAVER1Q8IY67 606 aaKnown RBP10.87□□□□□ -0.67
USF1-201ENST00000368019 Q8N9G6 341 aaPredicted RBP10.87□□□□□ -0.67
USF1-201ENST00000368019 AQP11Q8NBQ7 271 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 GANCQ8TET4 914 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 APOBEC4Q8WW27 367 aaKnown RBP10.87□□□□□ -0.67
USF1-201ENST00000368019 SLC25A46Q96AG3 418 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 PDXPQ96GD0 296 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 EFCAB11Q9BUY7 163 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 UCK2Q9BZX2 261 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 SUV39H2Q9H5I1 410 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 RNF167Q9H6Y7 350 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 ERVMER34-1Q9H9K5 563 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 NMNAT1Q9HAN9 279 aaPredicted RBP10.87□□□□□ -0.67
USF1-201ENST00000368019 AMBNQ9NP70 447 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 A4GALTQ9NPC4 353 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 STOX2Q9P2F5 926 aaPredicted RBP10.87□□□□□ -0.67
USF1-201ENST00000368019 ACAD8Q9UKU7 415 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 TMCC3Q9ULS5 477 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 DIMT1Q9UNQ2 313 aaKnown RBP10.87□□□□□ -0.67
USF1-201ENST00000368019 ASB4Q9Y574 426 aa10.87□□□□□ -0.67
USF1-201ENST00000368019 CFAP46Q8IYW2 2715 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 TRBC2A0A5B9 178 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 CCDC182A6NF36 153 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 PRAMEF25A6NGN4 478 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 YKT6O15498 198 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 GUCY1B2O75343 617 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 LDOC1O95751 146 aaPredicted RBP10.86□□□□□ -0.67
USF1-201ENST00000368019 ADH1BP00325 375 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 C1QCP02747 245 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 CYP2A6P11509 494 aaPredicted RBP10.86□□□□□ -0.67
USF1-201ENST00000368019 PRKCAP17252 672 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 UQCRC2P22695 453 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 DRD3P35462 400 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 RPS19P39019 145 aaKnown RBP10.86□□□□□ -0.67
USF1-201ENST00000368019 CRATP43155 626 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 STK19P49842 368 aaPredicted RBP10.86□□□□□ -0.67
USF1-201ENST00000368019 NXPH1P58417 271 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 PPP3R1P63098 170 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 HSPA14Q0VDF9 509 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 TNK1Q13470 666 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 CARTPTQ16568 116 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 C3orf38Q5JPI3 329 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 NXNL2Q5VZ03 156 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 FAM71E1Q6IPT2 247 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 ZNF767PQ75MW2 155 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 TAGAPQ8N103 731 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 FAM26EQ8N5C1 309 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 PLA2G15Q8NCC3 412 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 OR7G3Q8NG95 312 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 OR9Q2Q8NGE9 314 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 NFKBIDQ8NI38 313 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 ZFAND1Q8TCF1 268 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 GPR151Q8TDV0 419 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 CREB3L4Q8TEY5 395 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 NR4A3Q92570 626 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 UBE2E3Q969T4 207 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 MARVELD3Q96A59 401 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 PPCDCQ96CD2 204 aa10.86□□□□□ -0.67
USF1-201ENST00000368019 MED30Q96HR3 178 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms