RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 OR10A6Q8NH74 314 aa11.95□□□□□ -0.5
DDX39A-202ENST00000324340 ANKRD9Q96BM1 317 aaPredicted RBP11.95□□□□□ -0.5
DDX39A-202ENST00000324340 OR1F2PQ96R84 312 aa11.95□□□□□ -0.5
DDX39A-202ENST00000324340 SNX18Q96RF0 628 aa11.95□□□□□ -0.5
DDX39A-202ENST00000324340 KCTD14Q9BQ13 255 aaPredicted RBP11.95□□□□□ -0.5
DDX39A-202ENST00000324340 SPATA9Q9BWV2 254 aa11.95□□□□□ -0.5
DDX39A-202ENST00000324340 OR2B2Q9GZK3 357 aa11.95□□□□□ -0.5
DDX39A-202ENST00000324340 HOXD1Q9GZZ0 328 aa11.95□□□□□ -0.5
DDX39A-202ENST00000324340 PCDHAC1Q9H158 963 aa11.95□□□□□ -0.5
DDX39A-202ENST00000324340 GPATCH2Q9NW75 528 aa11.95□□□□□ -0.5
DDX39A-202ENST00000324340 SMPD3Q9NY59 655 aaPredicted RBP11.95□□□□□ -0.5
DDX39A-202ENST00000324340 HCN3Q9P1Z3 774 aa11.95□□□□□ -0.5
DDX39A-202ENST00000324340 CLCA2Q9UQC9 943 aa11.95□□□□□ -0.5
DDX39A-202ENST00000324340 MRPS33Q9Y291 106 aaKnown RBP11.95□□□□□ -0.5
DDX39A-202ENST00000324340 A0A1W2PS29 197 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 J3QRK9 145 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 SCO2O43819 266 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 HYAL3O43820 417 aaPredicted RBP11.94□□□□□ -0.5
DDX39A-202ENST00000324340 FGF17O60258 216 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 SLITRK5O94991 958 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 ONECUT2O95948 504 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 ATP1B1P05026 303 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 CPMP14384 443 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 CSTF2P33240 577 aaKnown RBP eCLIP11.94□□□□□ -0.5
DDX39A-202ENST00000324340 FEN1P39748 380 aaKnown RBP11.94□□□□□ -0.5
DDX39A-202ENST00000324340 XKP51811 444 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 OR4D2P58180 307 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 MAT1AQ00266 395 aaKnown RBP11.94□□□□□ -0.5
DDX39A-202ENST00000324340 FADDQ13158 208 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 RGNQ15493 299 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 ZNF750Q32MQ0 723 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 ATAD3BQ5T9A4 648 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 SAXO2Q658L1 398 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 ISLR2Q6UXK2 745 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 PRSS48Q7RTY5 328 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 AKAP14Q86UN6 197 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 ARMC8Q8IUR7 673 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 ZC3H7AQ8IWR0 971 aaKnown RBP11.94□□□□□ -0.5
DDX39A-202ENST00000324340 CCDC116Q8IYX3 515 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 CBR4Q8N4T8 237 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 OR2T12Q8NG77 320 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 SFXN5Q8TD22 340 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 PHF10Q8WUB8 498 aaKnown RBP11.94□□□□□ -0.5
DDX39A-202ENST00000324340 TTC9Q92623 222 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 HDAC2Q92769 488 aaKnown RBP11.94□□□□□ -0.5
DDX39A-202ENST00000324340 PPWD1Q96BP3 646 aaKnown RBP11.94□□□□□ -0.5
DDX39A-202ENST00000324340 TBC1D20Q96BZ9 403 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 NEURL3Q96EH8 262 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 FAM120BQ96EK7 910 aaKnown RBP11.94□□□□□ -0.5
DDX39A-202ENST00000324340 ZNF486Q96H40 463 aaPredicted RBP11.94□□□□□ -0.5
DDX39A-202ENST00000324340 PEX11GQ96HA9 241 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 REXO5Q96IC2 774 aaKnown RBP11.94□□□□□ -0.5
DDX39A-202ENST00000324340 NECTIN3Q9NQS3 549 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 SEMA3GQ9NS98 782 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 OCIAD1Q9NX40 245 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 TOR4AQ9NXH8 423 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 NTMQ9P121 344 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 ACTR3BQ9P1U1 418 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 DHCR7Q9UBM7 475 aaKnown RBP11.94□□□□□ -0.5
DDX39A-202ENST00000324340 MAP4K5Q9Y4K4 846 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 CLDN16Q9Y5I7 305 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 GPR179Q6PRD1 2367 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 NUP210LQ5VU65 1888 aa11.94□□□□□ -0.5
DDX39A-202ENST00000324340 RNF103-CHMP3A0A140T963 221 aa11.93□□□□□ -0.5
DDX39A-202ENST00000324340 EFCAB7A8K855 629 aa11.93□□□□□ -0.5
DDX39A-202ENST00000324340 TMX2-CTNND1H3BSU7 103 aa11.93□□□□□ -0.5
DDX39A-202ENST00000324340 CLDN4O14493 209 aa11.93□□□□□ -0.5
DDX39A-202ENST00000324340 GDF9O60383 454 aa11.93□□□□□ -0.5
DDX39A-202ENST00000324340 CTNSO60931 367 aa11.93□□□□□ -0.5
DDX39A-202ENST00000324340 LDB3O75112 727 aa11.93□□□□□ -0.5
DDX39A-202ENST00000324340 KCNK5O95279 499 aa11.93□□□□□ -0.5
DDX39A-202ENST00000324340 FHP07954 510 aa11.93□□□□□ -0.5
DDX39A-202ENST00000324340 HBQ1P09105 142 aa11.93□□□□□ -0.5
DDX39A-202ENST00000324340 C8orf89P0DMQ9 161 aa11.93□□□□□ -0.5
DDX39A-202ENST00000324340 GGT1P19440 569 aa11.93□□□□□ -0.5
DDX39A-202ENST00000324340 ALAS2P22557 587 aa11.93□□□□□ -0.5
DDX39A-202ENST00000324340 PSMA4P25789 261 aaKnown RBP11.93□□□□□ -0.5
DDX39A-202ENST00000324340 OPRL1P41146 370 aa11.93□□□□□ -0.5
DDX39A-202ENST00000324340 OR1D4P47884 311 aa11.93□□□□□ -0.5
DDX39A-202ENST00000324340 HSD17B7P56937 341 aa11.93□□□□□ -0.5
DDX39A-202ENST00000324340 INSM1Q01101 510 aaPredicted RBP11.93□□□□□ -0.5
DDX39A-202ENST00000324340 MC2RQ01718 297 aa11.93□□□□□ -0.5
DDX39A-202ENST00000324340 COL9A2Q14055 689 aaPredicted RBP11.93□□□□□ -0.5
DDX39A-202ENST00000324340 SYT16Q17RD7 645 aa11.93□□□□□ -0.5
DDX39A-202ENST00000324340 STPG1Q5TH74 334 aa11.93□□□□□ -0.5
DDX39A-202ENST00000324340 PWWP2BQ6NUJ5 590 aa11.93□□□□□ -0.5
DDX39A-202ENST00000324340 IFNEQ86WN2 208 aa11.93□□□□□ -0.5
DDX39A-202ENST00000324340 PPP1R3BQ86XI6 285 aa11.93□□□□□ -0.5
DDX39A-202ENST00000324340 PROSER1Q86XN7 944 aa11.93□□□□□ -0.5
DDX39A-202ENST00000324340 MICU2Q8IYU8 434 aa11.93□□□□□ -0.5
DDX39A-202ENST00000324340 CLEC4FQ8N1N0 589 aa11.93□□□□□ -0.5
DDX39A-202ENST00000324340 METTL27Q8N6F8 245 aaPredicted RBP11.93□□□□□ -0.5
DDX39A-202ENST00000324340 MOAP1Q96BY2 351 aa11.93□□□□□ -0.5
DDX39A-202ENST00000324340 SEMA6AQ9H2E6 1030 aa11.93□□□□□ -0.5
DDX39A-202ENST00000324340 ZNF304Q9HCX3 659 aa11.93□□□□□ -0.5
DDX39A-202ENST00000324340 LANCL2Q9NS86 450 aa11.93□□□□□ -0.5
DDX39A-202ENST00000324340 IFT80Q9P2H3 777 aaPredicted RBP11.93□□□□□ -0.5
DDX39A-202ENST00000324340 MAGEL2Q9UJ55 1249 aa11.93□□□□□ -0.5
DDX39A-202ENST00000324340 ENPP5Q9UJA9 477 aa11.93□□□□□ -0.5
DDX39A-202ENST00000324340 ACSL6Q9UKU0 697 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms