RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 CDCA4Q9BXL8 241 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 MROQ9BYG7 248 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 GLIPR2Q9H4G4 154 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 ZCCHC3Q9NUD5 404 aaKnown RBP13.33□□□□□ -0.28
VRK3-201ENST00000316763 POT1Q9NUX5 634 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 GPC6Q9Y625 555 aaPredicted RBP13.33□□□□□ -0.28
VRK3-201ENST00000316763 A3GALT2U3KPV4 340 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 DSPPQ9NZW4 1301 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 TRBV23OR9-2A0A075B6M9 112 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 IGKV1-8A0A0C4DH67 115 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 A0A0G2JN53 185 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 FUOMA2VDF0 154 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 B4GALT2O60909 372 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 PIPP12273 146 aaPredicted RBP13.33□□□□□ -0.28
VRK3-201ENST00000316763 BMP4P12644 408 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 PEBP1P30086 187 aaKnown RBP13.33□□□□□ -0.28
VRK3-201ENST00000316763 AHRP35869 848 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 PSMD7P51665 324 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 CRISP3P54108 245 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 SNRPGP62308 76 aaKnown RBP13.33□□□□□ -0.28
VRK3-201ENST00000316763 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.33□□□□□ -0.28
VRK3-201ENST00000316763 ZIC1Q15915 447 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 TBC1D25Q3MII6 688 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 TIMM50Q3ZCQ8 353 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 ZNF404Q494X3 552 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 TOR1AIP1Q5JTV8 583 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 PEAR1Q5VY43 1037 aaPredicted RBP13.33□□□□□ -0.28
VRK3-201ENST00000316763 LINC00471Q8N535 108 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 SRFBP1Q8NEF9 429 aaKnown RBP13.33□□□□□ -0.28
VRK3-201ENST00000316763 VANGL1Q8TAA9 524 aaPredicted RBP13.33□□□□□ -0.28
VRK3-201ENST00000316763 MOAP1Q96BY2 351 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 DACH2Q96NX9 599 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 TREX2Q9BQ50 279 aaPredicted RBP13.33□□□□□ -0.28
VRK3-201ENST00000316763 ALOXE3Q9BYJ1 711 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 DSN1Q9H410 356 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 CPNE7Q9UBL6 633 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 SLC9A8Q9Y2E8 581 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 SNX11Q9Y5W9 270 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 RALGAPA1Q6GYQ0 2036 aa13.32□□□□□ -0.28
VRK3-201ENST00000316763 ADAMTS9Q9P2N4 1935 aa13.32□□□□□ -0.28
VRK3-201ENST00000316763 UGT2B17O75795 530 aa13.32□□□□□ -0.28
VRK3-201ENST00000316763 PTHP01270 115 aa13.32□□□□□ -0.28
VRK3-201ENST00000316763 CHRM5P08912 532 aaPredicted RBP13.32□□□□□ -0.28
VRK3-201ENST00000316763 ALOX5P09917 674 aa13.32□□□□□ -0.28
VRK3-201ENST00000316763 CDH3P22223 829 aa13.32□□□□□ -0.28
VRK3-201ENST00000316763 BCL6P41182 706 aa13.32□□□□□ -0.28
VRK3-201ENST00000316763 SLAMF1Q13291 335 aa13.32□□□□□ -0.28
VRK3-201ENST00000316763 C1orf61Q13536 156 aa13.32□□□□□ -0.28
VRK3-201ENST00000316763 ELOCQ15369 112 aa13.32□□□□□ -0.28
VRK3-201ENST00000316763 MAPK11Q15759 364 aa13.32□□□□□ -0.28
VRK3-201ENST00000316763 SYPL1Q16563 259 aa13.32□□□□□ -0.28
VRK3-201ENST00000316763 PLAG1Q6DJT9 500 aa13.32□□□□□ -0.28
VRK3-201ENST00000316763 TUBA3EQ6PEY2 450 aa13.32□□□□□ -0.28
VRK3-201ENST00000316763 CASP12Q6UXS9 341 aa13.32□□□□□ -0.28
VRK3-201ENST00000316763 TMEM64Q6YI46 380 aa13.32□□□□□ -0.28
VRK3-201ENST00000316763 AMER3Q8N944 861 aa13.32□□□□□ -0.28
VRK3-201ENST00000316763 OR4E2Q8NGC2 313 aa13.32□□□□□ -0.28
VRK3-201ENST00000316763 SLC37A2Q8TED4 501 aa13.32□□□□□ -0.28
VRK3-201ENST00000316763 PATE1Q8WXA2 126 aa13.32□□□□□ -0.28
VRK3-201ENST00000316763 LOXL4Q96JB6 756 aa13.32□□□□□ -0.28
VRK3-201ENST00000316763 ZBTB20Q9HC78 741 aaPredicted RBP13.32□□□□□ -0.28
VRK3-201ENST00000316763 GIN1Q9NXP7 522 aa13.32□□□□□ -0.28
VRK3-201ENST00000316763 SPHK1Q9NYA1 384 aa13.32□□□□□ -0.28
VRK3-201ENST00000316763 SUSD2Q9UGT4 822 aa13.32□□□□□ -0.28
VRK3-201ENST00000316763 ACAD8Q9UKU7 415 aa13.32□□□□□ -0.28
VRK3-201ENST00000316763 KLK4Q9Y5K2 254 aa13.32□□□□□ -0.28
VRK3-201ENST00000316763 CACNA1EQ15878 2313 aa13.32□□□□□ -0.28
VRK3-201ENST00000316763 TMEM131Q92545 1883 aa13.32□□□□□ -0.28
VRK3-201ENST00000316763 A0A1B0GVT2 93 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 M0R129 80 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 ZW10O43264 779 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 ERI3O43414 337 aaKnown RBP13.31□□□□□ -0.28
VRK3-201ENST00000316763 CMPK1P30085 196 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 RGS6P49758 472 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 XKP51811 444 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 GPR18Q14330 331 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 OXA1LQ15070 435 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 MEDAGQ5VYS4 303 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 SLX4IPQ5VYV7 408 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 ZNF793Q6ZN11 406 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 BTLAQ7Z6A9 289 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 SFTPA2Q8IWL1 248 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 TRIM48Q8IWZ4 208 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 OR2L3Q8NG85 312 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 JPH3Q8WXH2 748 aaPredicted RBP13.31□□□□□ -0.28
VRK3-201ENST00000316763 ATOH1Q92858 354 aaPredicted RBP13.31□□□□□ -0.28
VRK3-201ENST00000316763 FNDC11Q9BVV2 318 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 BTBD2Q9BX70 525 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 POLR2J3Q9H1A7 115 aaKnown RBP13.31□□□□□ -0.28
VRK3-201ENST00000316763 ARRDC1-AS1Q9H2J1 176 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 SRMSQ9H3Y6 488 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 SERHL2Q9H4I8 314 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 GIMAP4Q9NUV9 329 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 CCDC59Q9P031 241 aaKnown RBP13.31□□□□□ -0.28
VRK3-201ENST00000316763 REV1Q9UBZ9 1251 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 NDOR1Q9UHB4 597 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 ENTPD4Q9Y227 616 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 PCDHGA3Q9Y5H0 932 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 DMDP11532 3685 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 H3BN98 237 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms