RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 SIMC1Q8NDZ2 872 aa18.69■□□□□ 0.58
RHBDD3-201ENST00000216085 C9orf43Q8TAL5 461 aaPredicted RBP18.69■□□□□ 0.58
RHBDD3-201ENST00000216085 ASB15Q8WXK1 588 aa18.69■□□□□ 0.58
RHBDD3-201ENST00000216085 ADIPOR1Q96A54 375 aa18.69■□□□□ 0.58
RHBDD3-201ENST00000216085 ACTRT3Q9BYD9 372 aa18.69■□□□□ 0.58
RHBDD3-201ENST00000216085 PCDHGB3Q9Y5G1 929 aa18.69■□□□□ 0.58
RHBDD3-201ENST00000216085 DOCK10Q96BY6 2186 aa18.69■□□□□ 0.58
RHBDD3-201ENST00000216085 LOC100653049A0A140TA62 436 aa18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 KRT34O76011 436 aa18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 GSNP06396 782 aa18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 KRT20P35900 424 aa18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 CDKN2CP42773 168 aa18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 ARG2P78540 354 aa18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 TXNL4AP83876 142 aaKnown RBP18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 GAB1Q13480 694 aa18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 C6orf120Q7Z4R8 191 aa18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 GPALPP1Q8IXQ4 340 aa18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 DND1Q8IYX4 353 aaKnown RBP18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 BEST3Q8N1M1 668 aa18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 DPP10Q8N608 796 aa18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 HORMAD2Q8N7B1 307 aa18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 SLC9A6Q92581 669 aa18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 TTC9Q92623 222 aa18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 NEURL3Q96EH8 262 aa18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 ABHD17AQ96GS6 310 aa18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 PHF12Q96QT6 1004 aa18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 LMF2Q9BU23 707 aaKnown RBP18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 RNF32Q9H0A6 362 aa18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 RAD21L1Q9H4I0 556 aa18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 SLC52A3Q9NQ40 469 aa18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 MRTO4Q9UKD2 239 aaKnown RBP18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 DTX4Q9Y2E6 619 aa18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 GPR55Q9Y2T6 319 aaPredicted RBP18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 ASPDHA6ND91 283 aa18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 ALOX5P09917 674 aa18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 FAM87AP0C7U9 286 aa18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 PPIBP23284 216 aaKnown RBP18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 PRDX6P30041 224 aa18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 NFYCQ13952 458 aa18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 PIGGQ5H8A4 983 aa18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 DHDDSQ86SQ9 333 aa18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 ZNF441Q8N8Z8 693 aa18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 ADAMTS15Q8TE58 950 aa18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 RASL10BQ96S79 203 aa18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 UTP23Q9BRU9 249 aaKnown RBP18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 LIN28AQ9H9Z2 209 aaKnown RBP18.68■□□□□ 0.58
RHBDD3-201ENST00000216085 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.67■□□□□ 0.58
RHBDD3-201ENST00000216085 TMEM200CA6NKL6 621 aa18.67■□□□□ 0.58
RHBDD3-201ENST00000216085 DUXAA6NLW8 204 aa18.67■□□□□ 0.58
RHBDD3-201ENST00000216085 AGR2O95994 175 aa18.67■□□□□ 0.58
RHBDD3-201ENST00000216085 COX4I1P13073 169 aa18.67■□□□□ 0.58
RHBDD3-201ENST00000216085 OC90Q02509 493 aaPredicted RBP18.67■□□□□ 0.58
RHBDD3-201ENST00000216085 NNATQ16517 81 aa18.67■□□□□ 0.58
RHBDD3-201ENST00000216085 LINC00303Q3SY05 128 aa18.67■□□□□ 0.58
RHBDD3-201ENST00000216085 PAGE3Q5JUK9 113 aa18.67■□□□□ 0.58
RHBDD3-201ENST00000216085 LRIF1Q5T3J3 769 aa18.67■□□□□ 0.58
RHBDD3-201ENST00000216085 SAXO2Q658L1 398 aa18.67■□□□□ 0.58
RHBDD3-201ENST00000216085 CDC73Q6P1J9 531 aa18.67■□□□□ 0.58
RHBDD3-201ENST00000216085 SLC44A2Q8IWA5 706 aaPredicted RBP18.67■□□□□ 0.58
RHBDD3-201ENST00000216085 ZADH2Q8N4Q0 377 aa18.67■□□□□ 0.58
RHBDD3-201ENST00000216085 GPR151Q8TDV0 419 aa18.67■□□□□ 0.58
RHBDD3-201ENST00000216085 GIMAP5Q96F15 307 aa18.67■□□□□ 0.58
RHBDD3-201ENST00000216085 STACQ99469 402 aa18.67■□□□□ 0.58
RHBDD3-201ENST00000216085 TRIM4Q9C037 500 aa18.67■□□□□ 0.58
RHBDD3-201ENST00000216085 PAIP1Q9H074 479 aaKnown RBP18.67■□□□□ 0.58
RHBDD3-201ENST00000216085 NXF5Q9H1B4 397 aaKnown RBP18.67■□□□□ 0.58
RHBDD3-201ENST00000216085 GPATCH2Q9NW75 528 aa18.67■□□□□ 0.58
RHBDD3-201ENST00000216085 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.67■□□□□ 0.58
RHBDD3-201ENST00000216085 CORO2BQ9UQ03 480 aa18.67■□□□□ 0.58
RHBDD3-201ENST00000216085 A8MVJ9 347 aa18.66■□□□□ 0.58
RHBDD3-201ENST00000216085 MRASO14807 208 aa18.66■□□□□ 0.58
RHBDD3-201ENST00000216085 NPPAP01160 153 aa18.66■□□□□ 0.58
RHBDD3-201ENST00000216085 MATN1P21941 496 aa18.66■□□□□ 0.58
RHBDD3-201ENST00000216085 MAGEA8P43361 318 aa18.66■□□□□ 0.58
RHBDD3-201ENST00000216085 CYB561P49447 251 aa18.66■□□□□ 0.58
RHBDD3-201ENST00000216085 KHKP50053 298 aa18.66■□□□□ 0.58
RHBDD3-201ENST00000216085 PSMD4P55036 377 aaKnown RBP18.66■□□□□ 0.58
RHBDD3-201ENST00000216085 PLCXD2Q0VAA5 305 aa18.66■□□□□ 0.58
RHBDD3-201ENST00000216085 LACTB2Q53H82 288 aaPredicted RBP18.66■□□□□ 0.58
RHBDD3-201ENST00000216085 REP15Q6BDI9 236 aa18.66■□□□□ 0.58
RHBDD3-201ENST00000216085 COX18Q8N8Q8 333 aa18.66■□□□□ 0.58
RHBDD3-201ENST00000216085 NPAS2Q99743 824 aa18.66■□□□□ 0.58
RHBDD3-201ENST00000216085 TPT1P8Q9HAU6 139 aa18.66■□□□□ 0.58
RHBDD3-201ENST00000216085 DUSP22Q9NRW4 184 aa18.66■□□□□ 0.58
RHBDD3-201ENST00000216085 GID8Q9NWU2 228 aa18.66■□□□□ 0.58
RHBDD3-201ENST00000216085 HPF1Q9NWY4 346 aa18.66■□□□□ 0.58
RHBDD3-201ENST00000216085 GIN1Q9NXP7 522 aa18.66■□□□□ 0.58
RHBDD3-201ENST00000216085 ERVK-11Q9UQG0 969 aa18.66■□□□□ 0.58
RHBDD3-201ENST00000216085 PCDHB14Q9Y5E9 798 aa18.66■□□□□ 0.58
RHBDD3-201ENST00000216085 NUP214P35658 2090 aaPredicted RBP18.66■□□□□ 0.58
RHBDD3-201ENST00000216085 OR5H15A6NDH6 313 aa18.65■□□□□ 0.58
RHBDD3-201ENST00000216085 TO15178 435 aa18.65■□□□□ 0.58
RHBDD3-201ENST00000216085 DPM1O60762 260 aa18.65■□□□□ 0.58
RHBDD3-201ENST00000216085 TRHRP34981 398 aaPredicted RBP18.65■□□□□ 0.58
RHBDD3-201ENST00000216085 CORO7P57737 925 aa18.65■□□□□ 0.58
RHBDD3-201ENST00000216085 PSG6Q00889 435 aa18.65■□□□□ 0.58
RHBDD3-201ENST00000216085 TRMT5Q32P41 509 aaKnown RBP18.65■□□□□ 0.58
RHBDD3-201ENST00000216085 CYP27C1Q4G0S4 372 aa18.65■□□□□ 0.58
RHBDD3-201ENST00000216085 FAM91A1Q658Y4 838 aa18.65■□□□□ 0.58
RHBDD3-201ENST00000216085 IGFL2Q6UWQ7 119 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms