RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 XKRXQ6PP77 449 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 CRTC1Q6UUV9 634 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 UNC5DQ6UXZ4 953 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 OR4N4Q8N0Y3 316 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 LRRC20Q8TCA0 184 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 ASB11Q8WXH4 323 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 TM9SF4Q92544 642 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 KLK6Q92876 244 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 AIF1LQ9BQI0 150 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 PDCD10Q9BUL8 212 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 KATNB1Q9BVA0 655 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 MND1Q9BWT6 205 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 CHIAQ9BZP6 476 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 IKZF2Q9UKS7 526 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 ZNF780BQ9Y6R6 833 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 KCNE1BA0A087WTH5 132 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 LOC105371267A0A1B0GV96 52 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.59□□□□□ -1.35
NEDD9-216ENST00000620854 A0A1W2PRB8 838 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 UBE2QL1A1L167 161 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 GTPBP1O00178 669 aaKnown RBP6.59□□□□□ -1.35
NEDD9-216ENST00000620854 ALPPL2P10696 532 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 TYRP14679 529 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 CTSOP43234 321 aaPredicted RBP6.59□□□□□ -1.35
NEDD9-216ENST00000620854 ERVK-21P61565 698 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 GNA13Q14344 377 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 PDGFRLQ15198 375 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 HLA-DQA1Q5Y7H0 255 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 AGTRAPQ6RW13 159 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 KRT77Q7Z794 578 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 IQCHQ86VS3 1027 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 DCAF4L2Q8NA75 395 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 OR10H4Q8NGA5 316 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 OR4C15Q8NGM1 316 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 ZFAND1Q8TCF1 268 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 GEMIN6Q8WXD5 167 aaKnown RBP6.59□□□□□ -1.35
NEDD9-216ENST00000620854 PMEPA1Q969W9 287 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 SLC25A46Q96AG3 418 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 DCLRE1CQ96SD1 692 aaKnown RBP6.59□□□□□ -1.35
NEDD9-216ENST00000620854 NRTNQ99748 197 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 DPCDQ9BVM2 203 aaPredicted RBP6.59□□□□□ -1.35
NEDD9-216ENST00000620854 TRMT61BQ9BVS5 477 aaKnown RBP6.59□□□□□ -1.35
NEDD9-216ENST00000620854 SLC12A9Q9BXP2 914 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 GON7Q9BXV9 100 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 LMAN2LQ9H0V9 348 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 MED28Q9H204 178 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 MVB12BQ9H7P6 319 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 B3GAT2Q9NPZ5 323 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 ASIC5Q9NY37 505 aa6.59□□□□□ -1.35
NEDD9-216ENST00000620854 C1orf226A1L170 272 aa6.59□□□□□ -1.36
NEDD9-216ENST00000620854 ZAR1LA6NP61 321 aa6.59□□□□□ -1.36
NEDD9-216ENST00000620854 HEPACAM2A8MVW5 462 aa6.59□□□□□ -1.36
NEDD9-216ENST00000620854 M0R3H8 397 aa6.59□□□□□ -1.36
NEDD9-216ENST00000620854 HRO43593 1189 aa6.59□□□□□ -1.36
NEDD9-216ENST00000620854 ARSBP15848 533 aa6.59□□□□□ -1.36
NEDD9-216ENST00000620854 CD9P21926 228 aa6.59□□□□□ -1.36
NEDD9-216ENST00000620854 ENPP1P22413 925 aa6.59□□□□□ -1.36
NEDD9-216ENST00000620854 PCGF2P35227 344 aa6.59□□□□□ -1.36
NEDD9-216ENST00000620854 RPS5P46782 204 aaKnown RBP6.59□□□□□ -1.36
NEDD9-216ENST00000620854 SLBPQ14493 270 aaKnown RBP eCLIP6.59□□□□□ -1.36
NEDD9-216ENST00000620854 GINS1Q14691 196 aa6.59□□□□□ -1.36
NEDD9-216ENST00000620854 MBTPS1Q14703 1052 aa6.59□□□□□ -1.36
NEDD9-216ENST00000620854 GLYR1Q49A26 553 aaPredicted RBP6.59□□□□□ -1.36
NEDD9-216ENST00000620854 ACSM5Q6NUN0 579 aa6.59□□□□□ -1.36
NEDD9-216ENST00000620854 ANKRD54Q6NXT1 300 aa6.59□□□□□ -1.36
NEDD9-216ENST00000620854 WASH2PQ6VEQ5 465 aa6.59□□□□□ -1.36
NEDD9-216ENST00000620854 LRRC70Q7Z2Q7 622 aa6.59□□□□□ -1.36
NEDD9-216ENST00000620854 TECPR1Q7Z6L1 1165 aa6.59□□□□□ -1.36
NEDD9-216ENST00000620854 TMEM145Q8NBT3 493 aa6.59□□□□□ -1.36
NEDD9-216ENST00000620854 NEIL2Q969S2 332 aa6.59□□□□□ -1.36
NEDD9-216ENST00000620854 SLC6A18Q96N87 628 aa6.59□□□□□ -1.36
NEDD9-216ENST00000620854 ARPC5LQ9BPX5 153 aa6.59□□□□□ -1.36
NEDD9-216ENST00000620854 MAPKAP1Q9BPZ7 522 aa6.59□□□□□ -1.36
NEDD9-216ENST00000620854 TAPBPLQ9BX59 468 aa6.59□□□□□ -1.36
NEDD9-216ENST00000620854 ABCG4Q9H172 646 aa6.59□□□□□ -1.36
NEDD9-216ENST00000620854 NKX2-4Q9H2Z4 354 aa6.59□□□□□ -1.36
NEDD9-216ENST00000620854 SFXN1Q9H9B4 322 aa6.59□□□□□ -1.36
NEDD9-216ENST00000620854 KCNK12Q9HB15 430 aa6.59□□□□□ -1.36
NEDD9-216ENST00000620854 ZNF282Q9UDV7 671 aaPredicted RBP6.59□□□□□ -1.36
NEDD9-216ENST00000620854 TBX21Q9UL17 535 aa6.59□□□□□ -1.36
NEDD9-216ENST00000620854 MGAT4AQ9UM21 535 aa6.59□□□□□ -1.36
NEDD9-216ENST00000620854 TRAPPC4Q9Y296 219 aa6.59□□□□□ -1.36
NEDD9-216ENST00000620854 RPL36Q9Y3U8 105 aaKnown RBP6.59□□□□□ -1.36
NEDD9-216ENST00000620854 ENPP4Q9Y6X5 453 aa6.59□□□□□ -1.36
NEDD9-216ENST00000620854 CACNA1IQ9P0X4 2223 aa6.59□□□□□ -1.36
NEDD9-216ENST00000620854 WDR90Q96KV7 1748 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 TDRD15B5MCY1 1934 aaKnown RBP6.58□□□□□ -1.36
NEDD9-216ENST00000620854 TBC1D3DA0A087WVF3 549 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 TBC1D3IA0A087WXS9 549 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 TBC1D3EA0A087X179 549 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 TBC1D3KA0A087X1G2 549 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 TBC1D3FA6NER0 549 aaPredicted RBP6.58□□□□□ -1.36
NEDD9-216ENST00000620854 TBC1D3LB9A6J9 549 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 PAHP00439 452 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 TBC1D3HP0C7X1 549 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 HOXB6P17509 224 aaKnown RBP6.58□□□□□ -1.36
NEDD9-216ENST00000620854 PDHA2P29803 388 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 SLC9A3P48764 834 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 SRP9P49458 86 aaKnown RBP6.58□□□□□ -1.36
NEDD9-216ENST00000620854 PSMD4P55036 377 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms