RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 STMN3Q9NZ72 180 aa18.46■□□□□ 0.55
PDLIM3-212ENST00000620787 HSPB11Q9Y547 144 aa18.46■□□□□ 0.55
PDLIM3-212ENST00000620787 CDH10Q9Y6N8 788 aa18.46■□□□□ 0.55
PDLIM3-212ENST00000620787 CTSLP07711 333 aa18.46■□□□□ 0.55
PDLIM3-212ENST00000620787 BSGP35613 385 aa18.46■□□□□ 0.55
PDLIM3-212ENST00000620787 ANKK1Q8NFD2 765 aa18.46■□□□□ 0.55
PDLIM3-212ENST00000620787 OR5D16Q8NGK9 328 aa18.46■□□□□ 0.55
PDLIM3-212ENST00000620787 OR8D4Q8NGM9 314 aa18.46■□□□□ 0.55
PDLIM3-212ENST00000620787 OR6T1Q8NGN1 323 aa18.46■□□□□ 0.55
PDLIM3-212ENST00000620787 EXOSC8Q96B26 276 aaKnown RBP18.46■□□□□ 0.55
PDLIM3-212ENST00000620787 RNF32Q9H0A6 362 aa18.46■□□□□ 0.55
PDLIM3-212ENST00000620787 AHSPQ9NZD4 102 aa18.46■□□□□ 0.55
PDLIM3-212ENST00000620787 P2RX2Q9UBL9 471 aa18.46■□□□□ 0.55
PDLIM3-212ENST00000620787 ISM1B1AKI9 464 aa18.45■□□□□ 0.54
PDLIM3-212ENST00000620787 KDM4EB2RXH2 506 aaPredicted RBP18.45■□□□□ 0.54
PDLIM3-212ENST00000620787 RB1P06400 928 aa18.45■□□□□ 0.54
PDLIM3-212ENST00000620787 GAAP10253 952 aa18.45■□□□□ 0.54
PDLIM3-212ENST00000620787 CCT3P49368 545 aaKnown RBP18.45■□□□□ 0.54
PDLIM3-212ENST00000620787 AGFG1P52594 562 aaKnown RBP18.45■□□□□ 0.54
PDLIM3-212ENST00000620787 POM121L1PQ3SYA9 428 aa18.45■□□□□ 0.54
PDLIM3-212ENST00000620787 PRAMEF14Q5SWL7 426 aa18.45■□□□□ 0.54
PDLIM3-212ENST00000620787 PRAMEF13Q5VWM6 474 aa18.45■□□□□ 0.54
PDLIM3-212ENST00000620787 LHFPL3Q86UP9 236 aa18.45■□□□□ 0.54
PDLIM3-212ENST00000620787 MARCH9Q86YJ5 346 aa18.45■□□□□ 0.54
PDLIM3-212ENST00000620787 REM2Q8IYK8 340 aaPredicted RBP18.45■□□□□ 0.54
PDLIM3-212ENST00000620787 NATD1Q8N6N6 113 aa18.45■□□□□ 0.54
PDLIM3-212ENST00000620787 IL17FQ96PD4 163 aa18.45■□□□□ 0.54
PDLIM3-212ENST00000620787 TMED9Q9BVK6 235 aa18.45■□□□□ 0.54
PDLIM3-212ENST00000620787 HDHD5Q9BXW7 423 aa18.45■□□□□ 0.54
PDLIM3-212ENST00000620787 LINC00597Q9H2U6 94 aa18.45■□□□□ 0.54
PDLIM3-212ENST00000620787 OR51I1Q9H343 314 aa18.45■□□□□ 0.54
PDLIM3-212ENST00000620787 CLCA2Q9UQC9 943 aa18.45■□□□□ 0.54
PDLIM3-212ENST00000620787 SNTNA6NMZ2 147 aa18.45■□□□□ 0.54
PDLIM3-212ENST00000620787 UBXN7O94888 489 aa18.45■□□□□ 0.54
PDLIM3-212ENST00000620787 SLC1A3P43003 542 aa18.45■□□□□ 0.54
PDLIM3-212ENST00000620787 CTBP2P56545 445 aa18.45■□□□□ 0.54
PDLIM3-212ENST00000620787 KHDRBS2Q5VWX1 349 aaKnown RBP18.45■□□□□ 0.54
PDLIM3-212ENST00000620787 SLC27A4Q6P1M0 643 aa18.45■□□□□ 0.54
PDLIM3-212ENST00000620787 LIPIQ6XZB0 460 aa18.45■□□□□ 0.54
PDLIM3-212ENST00000620787 HMGN2P46Q86SG4 172 aa18.45■□□□□ 0.54
PDLIM3-212ENST00000620787 ADIPOR2Q86V24 386 aa18.45■□□□□ 0.54
PDLIM3-212ENST00000620787 C2orf73Q8N5S3 287 aaPredicted RBP18.45■□□□□ 0.54
PDLIM3-212ENST00000620787 PRRC1Q96M27 445 aa18.45■□□□□ 0.54
PDLIM3-212ENST00000620787 F2RL3Q96RI0 385 aa18.45■□□□□ 0.54
PDLIM3-212ENST00000620787 EPHX3Q9H6B9 360 aa18.45■□□□□ 0.54
PDLIM3-212ENST00000620787 SYNDIG1Q9H7V2 258 aa18.45■□□□□ 0.54
PDLIM3-212ENST00000620787 KCNK12Q9HB15 430 aa18.45■□□□□ 0.54
PDLIM3-212ENST00000620787 CTPS2Q9NRF8 586 aa18.45■□□□□ 0.54
PDLIM3-212ENST00000620787 RNF186Q9NXI6 227 aa18.45■□□□□ 0.54
PDLIM3-212ENST00000620787 NEDD8-MDP1E9PL57 170 aa18.44■□□□□ 0.54
PDLIM3-212ENST00000620787 INMT-MINDY4F8WBC2 141 aa18.44■□□□□ 0.54
PDLIM3-212ENST00000620787 GABRPO00591 440 aa18.44■□□□□ 0.54
PDLIM3-212ENST00000620787 GSTM3P21266 225 aa18.44■□□□□ 0.54
PDLIM3-212ENST00000620787 MMP12P39900 470 aa18.44■□□□□ 0.54
PDLIM3-212ENST00000620787 UBE3AQ05086 875 aa18.44■□□□□ 0.54
PDLIM3-212ENST00000620787 ZNF155Q12901 538 aaPredicted RBP18.44■□□□□ 0.54
PDLIM3-212ENST00000620787 INSL4Q14641 139 aa18.44■□□□□ 0.54
PDLIM3-212ENST00000620787 KRT78Q8N1N4 520 aa18.44■□□□□ 0.54
PDLIM3-212ENST00000620787 NEIL3Q8TAT5 605 aa18.44■□□□□ 0.54
PDLIM3-212ENST00000620787 TEX47Q8TBZ9 253 aa18.44■□□□□ 0.54
PDLIM3-212ENST00000620787 SETD7Q8WTS6 366 aaKnown RBP18.44■□□□□ 0.54
PDLIM3-212ENST00000620787 XAGE5Q8WWM1 108 aa18.44■□□□□ 0.54
PDLIM3-212ENST00000620787 AKAP1Q92667 903 aaKnown RBP eCLIP18.44■□□□□ 0.54
PDLIM3-212ENST00000620787 SLC9A8Q9Y2E8 581 aa18.44■□□□□ 0.54
PDLIM3-212ENST00000620787 PI15O43692 258 aa18.44■□□□□ 0.54
PDLIM3-212ENST00000620787 ELFN1P0C7U0 828 aa18.44■□□□□ 0.54
PDLIM3-212ENST00000620787 DSG2Q14126 1118 aa18.44■□□□□ 0.54
PDLIM3-212ENST00000620787 TMEM215Q68D42 235 aa18.44■□□□□ 0.54
PDLIM3-212ENST00000620787 MZT2AQ6P582 158 aa18.44■□□□□ 0.54
PDLIM3-212ENST00000620787 CCDC28AQ8IWP9 274 aa18.44■□□□□ 0.54
PDLIM3-212ENST00000620787 SLC37A3Q8NCC5 494 aa18.44■□□□□ 0.54
PDLIM3-212ENST00000620787 RAET1EQ8TD07 263 aa18.44■□□□□ 0.54
PDLIM3-212ENST00000620787 SLC35G5Q96KT7 338 aa18.44■□□□□ 0.54
PDLIM3-212ENST00000620787 MS4A8Q9BY19 250 aa18.44■□□□□ 0.54
PDLIM3-212ENST00000620787 MTG2Q9H4K7 406 aa18.44■□□□□ 0.54
PDLIM3-212ENST00000620787 C11orf49Q9H6J7 331 aa18.44■□□□□ 0.54
PDLIM3-212ENST00000620787 TBC1D17Q9HA65 648 aa18.44■□□□□ 0.54
PDLIM3-212ENST00000620787 PAK6Q9NQU5 681 aaPredicted RBP18.44■□□□□ 0.54
PDLIM3-212ENST00000620787 SLC23A1Q9UHI7 598 aa18.44■□□□□ 0.54
PDLIM3-212ENST00000620787 PLAGL1Q9UM63 463 aa18.44■□□□□ 0.54
PDLIM3-212ENST00000620787 ITM2BQ9Y287 266 aa18.44■□□□□ 0.54
PDLIM3-212ENST00000620787 COL4A3Q01955 1670 aa18.43■□□□□ 0.54
PDLIM3-212ENST00000620787 A0A1W2PQ72 361 aa18.43■□□□□ 0.54
PDLIM3-212ENST00000620787 NR2F1P10589 423 aa18.43■□□□□ 0.54
PDLIM3-212ENST00000620787 XPAP23025 273 aaPredicted RBP18.43■□□□□ 0.54
PDLIM3-212ENST00000620787 VASNQ6EMK4 673 aa18.43■□□□□ 0.54
PDLIM3-212ENST00000620787 LCTLQ6UWM7 567 aa18.43■□□□□ 0.54
PDLIM3-212ENST00000620787 TRMT11Q7Z4G4 463 aaKnown RBP18.43■□□□□ 0.54
PDLIM3-212ENST00000620787 TRAPPC5Q8IUR0 188 aa18.43■□□□□ 0.54
PDLIM3-212ENST00000620787 C9orf62Q8N4C0 152 aa18.43■□□□□ 0.54
PDLIM3-212ENST00000620787 ANKRD53Q8N9V6 530 aa18.43■□□□□ 0.54
PDLIM3-212ENST00000620787 POGLUT1Q8NBL1 392 aa18.43■□□□□ 0.54
PDLIM3-212ENST00000620787 VN1R2Q8NFZ6 395 aa18.43■□□□□ 0.54
PDLIM3-212ENST00000620787 UCN3Q969E3 161 aa18.43■□□□□ 0.54
PDLIM3-212ENST00000620787 CREB3L1Q96BA8 519 aa18.43■□□□□ 0.54
PDLIM3-212ENST00000620787 COQ7Q99807 217 aa18.43■□□□□ 0.54
PDLIM3-212ENST00000620787 WACQ9BTA9 647 aa18.43■□□□□ 0.54
PDLIM3-212ENST00000620787 ACAT2Q9BWD1 397 aa18.43■□□□□ 0.54
PDLIM3-212ENST00000620787 OR2AG1Q9H205 316 aa18.43■□□□□ 0.54
PDLIM3-212ENST00000620787 LHX9Q9NQ69 397 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms