RNA–Protein interactions for RNA: ENST00000617271.4

PCDH15-231, Transcript of protocadherin related 15, human

APPRIS P3 TSL 5 BASIC

Gene PCDH15, Length 6,425 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-231	ENST00000617271	ACTG1	P63261	375 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	DMWD	Q09019	674 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	SCAP	Q12770	1279 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	HNRNPA0	Q13151	305 aa	Known RBP	7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	SLC14A2	Q15849	920 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	SLC35F1	Q5T1Q4	408 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	TMEM139	Q8IV31	216 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	PQLC3	Q8N755	202 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	OR9K2	Q8NGE7	335 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	SFXN5	Q8TD22	340 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	ZNF675	Q8TD23	568 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	THAP3	Q8WTV1	239 aa	Predicted RBP	7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	PRR11	Q96HE9	360 aa	Predicted RBP	7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	MRGPRX2	Q96LB1	330 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	CRB3	Q9BUF7	120 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	APOO	Q9BUR5	198 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	BCAS3	Q9H6U6	928 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	RANBP3	Q9H6Z4	567 aa	Predicted RBP	7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	SLC35A3	Q9Y2D2	325 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	SOCS2	O14508	198 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	RRP8	O43159	456 aa	Known RBP	7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	GBA	P04062	536 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	CYBA	P13498	195 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	STK19	P49842	368 aa	Predicted RBP	7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	RRAS2	P62070	204 aa	Predicted RBP	7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	CTC1	Q2NKJ3	1217 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	KHDC1	Q4VXA5	237 aa	Known RBP	7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	MANEA	Q5SRI9	462 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	CES4A	Q5XG92	561 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	NIPAL3	Q6P499	406 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	GSG1L	Q6UXU4	331 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	MRPL10	Q7Z7H8	261 aa	Known RBP	7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	GOLM1	Q8NBJ4	401 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	RPLP0P6	Q8NHW5	317 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	RAB8B	Q92930	207 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	TRIM43	Q96BQ3	446 aa	Predicted RBP	7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	TXNDC15	Q96J42	360 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	CLSTN3	Q9BQT9	956 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	TOR3A	Q9H497	397 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	UNKL	Q9H9P5	680 aa	Known RBP	7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	DYNLRB1	Q9NP97	96 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	MAB21L2	Q9Y586	359 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	NPR2	P20594	1047 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	ACVR1B	P36896	505 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	DCAF7	P61962	342 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	BTBD16	Q32M84	506 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	METTL2B	Q6P1Q9	378 aa	Known RBP	7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	TRIM46	Q7Z4K8	759 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	CEACAM19	Q7Z692	300 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	UBXN10	Q96LJ8	280 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	WAC	Q9BTA9	647 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	TBCCD1	Q9NVR7	557 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	SAGE1	Q9NXZ1	904 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	EXTL2	Q9UBQ6	330 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	STUB1	Q9UNE7	303 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271		A0A1W2PPW3	197 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	C2orf78	A6NCI8	922 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	JRK	O75564	520 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	PTGS2	P35354	604 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	ADH7	P40394	386 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	SPINT3	P49223	89 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	ART1	P52961	327 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	TRA2B	P62995	288 aa	Known RBP	7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	RHD	Q02161	417 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	MOG	Q16653	247 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	ZNF181	Q2M3W8	571 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	TECRL	Q5HYJ1	363 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	COQ5	Q5HYK3	327 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	ZNF648	Q5T619	568 aa	Predicted RBP	7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	CLDN19	Q8N6F1	224 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	OR1J2	Q8NGS2	313 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	JPH3	Q8WXH2	748 aa	Predicted RBP	7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	TBC1D20	Q96BZ9	403 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	SLC41A3	Q96GZ6	507 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	ACTR10	Q9NZ32	417 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	RHCG	Q9UBD6	479 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	AP1M2	Q9Y6Q5	423 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	ZNF142	P52746	1687 aa	Predicted RBP	7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	CNOT4	O95628	575 aa	Known RBP	7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	ZNF182	P17025	639 aa	Predicted RBP	7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	CD6	P30203	668 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	GK	P32189	559 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	GCGR	P47871	477 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	EIF2B1	Q14232	305 aa	Known RBP	7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	RNF220	Q5VTB9	566 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	TMPRSS12	Q86WS5	348 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	SLC35F2	Q8IXU6	374 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	CMTM1	Q8IZ96	169 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	MS4A15	Q8N5U1	240 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	C12orf76	Q8N812	135 aa	Predicted RBP	7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	OR8J1	Q8NGP2	316 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	SLC7A13	Q8TCU3	470 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	C16orf78	Q8WTQ4	265 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	HCAR1	Q9BXC0	346 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	MMP27	Q9H306	513 aa		7.01	□□□□□ -1.29
PCDH15-231	ENST00000617271	LRRC37A3	O60309	1634 aa		7	□□□□□ -1.29
PCDH15-231	ENST00000617271	FEZF1	A0PJY2	475 aa		7	□□□□□ -1.29
PCDH15-231	ENST00000617271	CLCA1	A8K7I4	914 aa		7	□□□□□ -1.29
PCDH15-231	ENST00000617271	SHOX	O15266	292 aa		7	□□□□□ -1.29

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms