RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 ADGRE2Q9UHX3 823 aa8.7□□□□□ -1.02
BRCA1-226ENST00000591534 TNPO3Q9Y5L0 923 aaKnown RBP8.7□□□□□ -1.02
BRCA1-226ENST00000591534 NF1P21359 2839 aa8.7□□□□□ -1.02
BRCA1-226ENST00000591534 A0A0G2JNJ9 132 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 PINLYPA6NC86 204 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 CAPN14A8MX76 684 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 AHRRA9YTQ3 701 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 C4orf51C9J302 202 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 SLCO1B7G3V0H7 640 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 G3V3Y1 287 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 SYT5O00445 386 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 POLR3GO15318 223 aaPredicted RBP8.69□□□□□ -1.02
BRCA1-226ENST00000591534 PRKNO60260 465 aaPredicted RBP8.69□□□□□ -1.02
BRCA1-226ENST00000591534 CTAG2O75638 210 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 MYL2P10916 166 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 CPN2P22792 545 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 STT3AP46977 705 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 PIK3CGP48736 1102 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 HNRNPFP52597 415 aaKnown RBP8.69□□□□□ -1.02
BRCA1-226ENST00000591534 RPP38P78345 283 aaKnown RBP8.69□□□□□ -1.02
BRCA1-226ENST00000591534 PLIN5Q00G26 463 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 DOC2AQ14183 400 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 TBCCQ15814 346 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 C16orf47Q6ZP98 133 aaPredicted RBP8.69□□□□□ -1.02
BRCA1-226ENST00000591534 SLC29A4Q7RTT9 530 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 CAMKMTQ7Z624 323 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 TGIF2LYQ8IUE0 185 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 NUDCD3Q8IVD9 361 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 ZZZ3Q8IYH5 903 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 PM20D2Q8IYS1 436 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 RPRMLQ8N4K4 120 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 ACOT4Q8N9L9 421 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 TMEM52Q8NDY8 209 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 FAM13CQ8NE31 585 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 TCP10LQ8TDR4 215 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 MZB1Q8WU39 189 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 FAM222BQ8WU58 562 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 WDR34Q96EX3 536 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 CMTM7Q96FZ5 175 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 SENP5Q96HI0 755 aaPredicted RBP8.69□□□□□ -1.02
BRCA1-226ENST00000591534 F2RL3Q96RI0 385 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 AICDAQ9GZX7 198 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 CXXC4Q9H2H0 198 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 ACKR4Q9NPB9 350 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 PRDM7Q9NQW5 492 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 NOP53Q9NZM5 478 aaKnown RBP8.69□□□□□ -1.02
BRCA1-226ENST00000591534 CD274Q9NZQ7 290 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 Q9UFV3 132 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 PHF11Q9UIL8 331 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 ST6GALNAC2Q9UJ37 374 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 L3MBTL1Q9Y468 752 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 ATG4BQ9Y4P1 393 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 CLDN16Q9Y5I7 305 aa8.69□□□□□ -1.02
BRCA1-226ENST00000591534 TP53I11O14683 189 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 CCNT2O60583 730 aaKnown RBP8.68□□□□□ -1.02
BRCA1-226ENST00000591534 DIAPH2O60879 1101 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 LDB3O75112 727 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 GOSR1O95249 250 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 CCDC166P0CW27 439 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 CCL3P10147 92 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 TROVE2P10155 538 aaKnown RBP eCLIP8.68□□□□□ -1.02
BRCA1-226ENST00000591534 CPA3P15088 417 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 FOSL1P15407 271 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 CHN1P15882 459 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 HIST1H1TP22492 207 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-226ENST00000591534 ATP5A1P25705 553 aaKnown RBP8.68□□□□□ -1.02
BRCA1-226ENST00000591534 UQCRC1P31930 480 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 GCKP35557 465 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 BUD31P41223 144 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-226ENST00000591534 SSR2P43308 183 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 DNASE1L1P49184 302 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 RAP1GDS1P52306 607 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 DGKQP52824 942 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 ARFIP1P53367 373 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 PHEXP78562 749 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 FOXO1Q12778 655 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 DLG1Q12959 904 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 OR4D1Q15615 310 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 CFAP157Q5JU67 520 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 TMEM198Q66K66 360 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 MED27Q6P2C8 311 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 NLRC3Q7RTR2 1065 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 LRRC70Q7Z2Q7 622 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 CPLX4Q7Z7G2 160 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 CMC1Q7Z7K0 106 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 KIF18BQ86Y91 864 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 TAGAPQ8N103 731 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 C4orf33Q8N1A6 199 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 PAQR8Q8TEZ7 354 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 ESAMQ96AP7 390 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 SPACA9Q96E40 222 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-226ENST00000591534 HSPBAP1Q96EW2 488 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 CHMP6Q96FZ7 201 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 FBXL20Q96IG2 436 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 UBXN10Q96LJ8 280 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 ALPK1Q96QP1 1244 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 CSF3RQ99062 836 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 CCT7Q99832 543 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 PAIP2Q9BPZ3 127 aaKnown RBP8.68□□□□□ -1.02
BRCA1-226ENST00000591534 RPF2Q9H7B2 306 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms