RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 BCAS4Q8TDM0 211 aa10.58□□□□□ -0.72
TMEM116-218ENST00000552839 RIT1Q92963 219 aa10.58□□□□□ -0.72
TMEM116-218ENST00000552839 C11orf24Q96F05 449 aaPredicted RBP10.58□□□□□ -0.72
TMEM116-218ENST00000552839 POM121Q96HA1 1249 aa10.58□□□□□ -0.72
TMEM116-218ENST00000552839 TUBB6Q9BUF5 446 aa10.58□□□□□ -0.72
TMEM116-218ENST00000552839 BHLHE41Q9C0J9 482 aaPredicted RBP10.58□□□□□ -0.72
TMEM116-218ENST00000552839 OR8D2Q9GZM6 311 aa10.58□□□□□ -0.72
TMEM116-218ENST00000552839 KCNK13Q9HB14 408 aa10.58□□□□□ -0.72
TMEM116-218ENST00000552839 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.58□□□□□ -0.72
TMEM116-218ENST00000552839 CCDC167Q9P0B6 97 aa10.58□□□□□ -0.72
TMEM116-218ENST00000552839 ATP6V1HQ9UI12 483 aa10.58□□□□□ -0.72
TMEM116-218ENST00000552839 GTF3C1Q12789 2109 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 CCDC168Q8NDH2 2452 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 TRAV17A0A0B4J275 112 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 IGHV3-20A0A0C4DH32 117 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 TCRBV16S1A1N1A0A5B0 115 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 DYTNA2CJ06 578 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 FAM234BA2RU67 622 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 CCDC154A6NI56 674 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 SAGE2PA6NJ88 616 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 C9JVG2 144 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 C19orf84I3L1E1 186 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 ANGPT2O15123 496 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 WISP2O76076 250 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 ANP32DO95626 131 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 CPSF4O95639 269 aaKnown RBP10.57□□□□□ -0.72
TMEM116-218ENST00000552839 HPP00738 406 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 IL6P05231 212 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 ABCB1P08183 1280 aaPredicted RBP10.57□□□□□ -0.72
TMEM116-218ENST00000552839 SSTR2P30874 369 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 SOX11P35716 441 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 TNFSF10P50591 281 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 ADORA2A-AS1P86434 159 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 LRRC74AQ0VAA2 488 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 ZNF267Q14586 743 aaPredicted RBP10.57□□□□□ -0.72
TMEM116-218ENST00000552839 CDSNQ15517 529 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 INAQ16352 499 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 MMEL1Q495T6 779 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 TIGD2Q4W5G0 525 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 HLA-DQA1Q5Y7H0 255 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 OR4F3Q6IEY1 312 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 FAM180BQ6P0A1 224 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 MTFR2Q6P444 385 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 XKRXQ6PP77 449 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 PAOXQ6QHF9 649 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 NDUFAF7Q7L592 441 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 CCDC116Q8IYX3 515 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 OR4A15Q8NGL6 344 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 PSMF1Q92530 271 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 HAS2Q92819 552 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 CIDECQ96AQ7 238 aaPredicted RBP10.57□□□□□ -0.72
TMEM116-218ENST00000552839 ANKRD9Q96BM1 317 aaPredicted RBP10.57□□□□□ -0.72
TMEM116-218ENST00000552839 PPWD1Q96BP3 646 aaKnown RBP10.57□□□□□ -0.72
TMEM116-218ENST00000552839 ZNF764Q96H86 408 aaPredicted RBP10.57□□□□□ -0.72
TMEM116-218ENST00000552839 MAGED4Q96JG8 741 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 ZNF160Q9HCG1 818 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 NEUROD4Q9HD90 331 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 SDR39U1Q9NRG7 319 aaPredicted RBP10.57□□□□□ -0.72
TMEM116-218ENST00000552839 DDX18Q9NVP1 670 aaKnown RBP10.57□□□□□ -0.72
TMEM116-218ENST00000552839 FAM120CQ9NX05 1096 aaKnown RBP10.57□□□□□ -0.72
TMEM116-218ENST00000552839 PTGFRNQ9P2B2 879 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 BCAP29Q9UHQ4 241 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 SNX8Q9Y5X2 465 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 GPR45Q9Y5Y3 372 aa10.57□□□□□ -0.72
TMEM116-218ENST00000552839 IGKV3D-11A0A0A0MRZ8 115 aa10.56□□□□□ -0.72
TMEM116-218ENST00000552839 A0A1W2PRB8 838 aa10.56□□□□□ -0.72
TMEM116-218ENST00000552839 FCHO1O14526 889 aa10.56□□□□□ -0.72
TMEM116-218ENST00000552839 COQ9O75208 318 aa10.56□□□□□ -0.72
TMEM116-218ENST00000552839 SLITRK5O94991 958 aa10.56□□□□□ -0.72
TMEM116-218ENST00000552839 F10P00742 488 aa10.56□□□□□ -0.72
TMEM116-218ENST00000552839 LAMP1P11279 417 aa10.56□□□□□ -0.72
TMEM116-218ENST00000552839 COX6A1P12074 109 aa10.56□□□□□ -0.72
TMEM116-218ENST00000552839 ICAM2P13598 275 aa10.56□□□□□ -0.72
TMEM116-218ENST00000552839 EFNA1P20827 205 aaPredicted RBP10.56□□□□□ -0.72
TMEM116-218ENST00000552839 PDE7AQ13946 482 aa10.56□□□□□ -0.72
TMEM116-218ENST00000552839 TERF2Q15554 542 aa10.56□□□□□ -0.72
TMEM116-218ENST00000552839 ZNF750Q32MQ0 723 aa10.56□□□□□ -0.72
TMEM116-218ENST00000552839 SPANXN4Q5MJ08 99 aa10.56□□□□□ -0.72
TMEM116-218ENST00000552839 C6orf10Q5SRN2 563 aa10.56□□□□□ -0.72
TMEM116-218ENST00000552839 TMEM205Q6UW68 189 aa10.56□□□□□ -0.72
TMEM116-218ENST00000552839 ANGPTL8Q6UXH0 198 aa10.56□□□□□ -0.72
TMEM116-218ENST00000552839 RNF111Q6ZNA4 994 aa10.56□□□□□ -0.72
TMEM116-218ENST00000552839 SHISA5Q8N114 240 aa10.56□□□□□ -0.72
TMEM116-218ENST00000552839 VWA5B2Q8N398 1253 aa10.56□□□□□ -0.72
TMEM116-218ENST00000552839 TRIML2Q8N7C3 387 aa10.56□□□□□ -0.72
TMEM116-218ENST00000552839 OR9I1Q8NGQ6 314 aa10.56□□□□□ -0.72
TMEM116-218ENST00000552839 OR9A2Q8NGT5 310 aa10.56□□□□□ -0.72
TMEM116-218ENST00000552839 UCN3Q969E3 161 aa10.56□□□□□ -0.72
TMEM116-218ENST00000552839 TESCQ96BS2 214 aa10.56□□□□□ -0.72
TMEM116-218ENST00000552839 CNRIP1Q96F85 164 aaPredicted RBP10.56□□□□□ -0.72
TMEM116-218ENST00000552839 VMP1Q96GC9 406 aa10.56□□□□□ -0.72
TMEM116-218ENST00000552839 OR52E6Q96RD3 313 aa10.56□□□□□ -0.72
TMEM116-218ENST00000552839 ZNF700Q9H0M5 742 aa10.56□□□□□ -0.72
TMEM116-218ENST00000552839 ABI3Q9P2A4 366 aa10.56□□□□□ -0.72
TMEM116-218ENST00000552839 SEC14L3Q9UDX4 400 aa10.56□□□□□ -0.72
TMEM116-218ENST00000552839 ERVK-19Q9WJR5 959 aa10.56□□□□□ -0.72
TMEM116-218ENST00000552839 IGHV1-45A0A0A0MS14 117 aa10.55□□□□□ -0.72
TMEM116-218ENST00000552839 TRBV11-1A0A0K0K1C0 115 aa10.55□□□□□ -0.72
TMEM116-218ENST00000552839 WASHC1A8K0Z3 465 aa10.55□□□□□ -0.72
TMEM116-218ENST00000552839 GABRR3A8MPY1 467 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms