RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 CHI3L1P36222 383 aaPredicted RBP14.06□□□□□ -0.16
NXF1-213ENST00000532297 MESP2Q0VG99 397 aa14.06□□□□□ -0.16
NXF1-213ENST00000532297 KCNC3Q14003 757 aa14.06□□□□□ -0.16
NXF1-213ENST00000532297 OCLNQ16625 522 aa14.06□□□□□ -0.16
NXF1-213ENST00000532297 BRAT1Q6PJG6 821 aa14.06□□□□□ -0.16
NXF1-213ENST00000532297 ASB18Q6ZVZ8 466 aa14.06□□□□□ -0.16
NXF1-213ENST00000532297 C11orf24Q96F05 449 aaPredicted RBP14.06□□□□□ -0.16
NXF1-213ENST00000532297 SENP5Q96HI0 755 aaPredicted RBP14.06□□□□□ -0.16
NXF1-213ENST00000532297 NOTCH4Q99466 2003 aa14.06□□□□□ -0.16
NXF1-213ENST00000532297 ABCG4Q9H172 646 aa14.06□□□□□ -0.16
NXF1-213ENST00000532297 GULP1Q9UBP9 304 aa14.06□□□□□ -0.16
NXF1-213ENST00000532297 PHF11Q9UIL8 331 aa14.06□□□□□ -0.16
NXF1-213ENST00000532297 H0YIV9 168 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 CCT3P49368 545 aaKnown RBP14.05□□□□□ -0.16
NXF1-213ENST00000532297 TBPL1P62380 186 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 EEF1A2Q05639 463 aaKnown RBP14.05□□□□□ -0.16
NXF1-213ENST00000532297 GPR176Q14439 515 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 GRK1Q15835 563 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 COL28A1Q2UY09 1125 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 MPP7Q5T2T1 576 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 GRHL2Q6ISB3 625 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 TRIM40Q6P9F5 258 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 HTR3DQ70Z44 454 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 CAMKMTQ7Z624 323 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 TCEAL8Q8IYN2 117 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 OXR1Q8N573 874 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 ZNF655Q8N720 491 aaPredicted RBP14.05□□□□□ -0.16
NXF1-213ENST00000532297 OR11H7Q8NGC8 314 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 UFD1Q92890 307 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 OTUB1Q96FW1 271 aaPredicted RBP14.05□□□□□ -0.16
NXF1-213ENST00000532297 ZNF558Q96NG5 402 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 RSPO3Q9BXY4 272 aaPredicted RBP14.05□□□□□ -0.16
NXF1-213ENST00000532297 TMEM38AQ9H6F2 299 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 HS3ST2Q9Y278 367 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 PLXNA2O75051 1894 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 LRRK1Q38SD2 2015 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 RTCAO00442 366 aaKnown RBP14.05□□□□□ -0.16
NXF1-213ENST00000532297 NPC1O15118 1278 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 HK1P19367 917 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 BTG1P62324 171 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 TLE2Q04725 743 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 CSTF1Q05048 431 aaKnown RBP14.05□□□□□ -0.16
NXF1-213ENST00000532297 EXOSC2Q13868 293 aaKnown RBP14.05□□□□□ -0.16
NXF1-213ENST00000532297 SLBPQ14493 270 aaKnown RBP eCLIP14.05□□□□□ -0.16
NXF1-213ENST00000532297 PUM1Q14671 1186 aaKnown RBP eCLIP14.05□□□□□ -0.16
NXF1-213ENST00000532297 SLC5A12Q1EHB4 618 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 SPDYE7PQ495Y7 208 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 GPR139Q6DWJ6 353 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 TMEM107Q6UX40 140 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 UNC5DQ6UXZ4 953 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 FAM92BQ6ZTR7 304 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 TRILQ7L0X0 811 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 COMMD6Q7Z4G1 85 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 HDDC2Q7Z4H3 204 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 PRSS42Q7Z5A4 293 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 IL17RCQ8NAC3 791 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 PLA2G15Q8NCC3 412 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 TMEM159Q96B96 161 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 NT5DC2Q9H857 520 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 LIN7BQ9HAP6 207 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 SLC25A13Q9UJS0 675 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 KCND3Q9UK17 655 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 MGAT4BQ9UQ53 548 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 PCYT1BQ9Y5K3 369 aaPredicted RBP14.05□□□□□ -0.16
NXF1-213ENST00000532297 TRAV6A0A075B6T7 132 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 SERPINI2O75830 405 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 KLHL18O94889 574 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 POP4O95707 220 aaKnown RBP14.05□□□□□ -0.16
NXF1-213ENST00000532297 ALDH1A1P00352 501 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 HSD3B1P14060 373 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 HSD3B2P26439 372 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 STOMP27105 288 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 SLC6A1P30531 599 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 ATP12AP54707 1039 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 LRRC74AQ0VAA2 488 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 ADAM15Q13444 863 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 ZNF630Q2M218 657 aaPredicted RBP14.05□□□□□ -0.16
NXF1-213ENST00000532297 DCST1Q5T197 706 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 TMEM220Q6QAJ8 160 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 LRR1Q96L50 414 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 WFDC6Q9BQY6 131 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 CLEC4MQ9H2X3 399 aaPredicted RBP14.05□□□□□ -0.16
NXF1-213ENST00000532297 BRF2Q9HAW0 419 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 RC3H2Q9HBD1 1191 aaKnown RBP14.05□□□□□ -0.16
NXF1-213ENST00000532297 ANGPT4Q9Y264 503 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 WNT6Q9Y6F9 365 aa14.05□□□□□ -0.16
NXF1-213ENST00000532297 RPS10-NUDT3A0A1W2PQS6 291 aa14.04□□□□□ -0.16
NXF1-213ENST00000532297 IFNA7P01567 189 aa14.04□□□□□ -0.16
NXF1-213ENST00000532297 STATHP02808 62 aa14.04□□□□□ -0.16
NXF1-213ENST00000532297 PTBP1P26599 531 aaKnown RBP eCLIP14.04□□□□□ -0.163e-7■■■■■ 65.2
NXF1-213ENST00000532297 SSTR2P30874 369 aa14.04□□□□□ -0.16
NXF1-213ENST00000532297 TIA1P31483 386 aaKnown RBP eCLIP14.04□□□□□ -0.16
NXF1-213ENST00000532297 GABRA5P31644 462 aa14.04□□□□□ -0.16
NXF1-213ENST00000532297 OPRD1P41143 372 aa14.04□□□□□ -0.16
NXF1-213ENST00000532297 NTHL1P78549 312 aa14.04□□□□□ -0.16
NXF1-213ENST00000532297 TPBGQ13641 420 aa14.04□□□□□ -0.16
NXF1-213ENST00000532297 SYT14P1Q58G82 188 aa14.04□□□□□ -0.16
NXF1-213ENST00000532297 GPALPP1Q8IXQ4 340 aa14.04□□□□□ -0.16
NXF1-213ENST00000532297 SDR16C5Q8N3Y7 309 aa14.04□□□□□ -0.16
NXF1-213ENST00000532297 CPXM2Q8N436 756 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms