RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 OR4C11Q6IEV9 310 aa8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 NIPAL1Q6NVV3 410 aa8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 Q6ZSR9 355 aa8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 MAVSQ7Z434 540 aa8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 COMMD6Q7Z4G1 85 aa8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 NUDT13Q86X67 352 aa8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 ZCCHC7Q8N3Z6 543 aaKnown RBP8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 ACOT4Q8N9L9 421 aa8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 SRFBP1Q8NEF9 429 aaKnown RBP8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 STT3BQ8TCJ2 826 aa8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 CHTF18Q8WVB6 975 aa8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 RGMAQ96B86 450 aa8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 APIPQ96GX9 242 aa8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 FCRL1Q96LA6 429 aa8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 C3orf30Q96M34 536 aa8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 C7orf26Q96N11 449 aa8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 BBC3Q96PG8 261 aaPredicted RBP8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 SERINC2Q96SA4 455 aa8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 NPLQ9BXD5 320 aaPredicted RBP8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 DPH1Q9BZG8 443 aa8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 DDX31Q9H8H2 851 aaKnown RBP8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 SLCO1B3Q9NPD5 702 aa8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 PNPOQ9NVS9 261 aa8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 THAP1Q9NVV9 213 aa8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 IFT80Q9P2H3 777 aaPredicted RBP8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 FIS1Q9Y3D6 152 aa8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 CLDN16Q9Y5I7 305 aa8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 MRPS18BQ9Y676 258 aaKnown RBP8.2□□□□□ -1.1
CCDC90B-217ENST00000530253 NUP210LQ5VU65 1888 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 C9J4A7 227 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 ZNF195O14628 629 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 LSM1O15116 133 aaKnown RBP8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 KLK10O43240 276 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 SKAP2O75563 359 aaPredicted RBP8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 CRCPO75575 148 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 SCAF4O95104 1147 aaKnown RBP8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 BMP10O95393 424 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 PRR35P0CG20 571 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 NEFHP12036 1026 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 NR4A1P22736 598 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 PTPN4P29074 926 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 XCR1P46094 333 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 RPL14P50914 215 aaKnown RBP8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 RAP1GDS1P52306 607 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 HNRNPFP52597 415 aaKnown RBP8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 LIM2P55344 173 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 HNRNPH2P55795 449 aaKnown RBP8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 RAB38P57729 211 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 BTKQ06187 659 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 TGM3Q08188 693 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 IL10RAQ13651 578 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 VWA2Q5GFL6 755 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 ARFGAP2Q8N6H7 521 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 C1orf52Q8N6N3 182 aaKnown RBP8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 GLB1L3Q8NCI6 653 aaPredicted RBP8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 OR2Y1Q8NGV0 311 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 OR51Q1Q8NH59 317 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 LRRC8CQ8TDW0 803 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 STARD8Q92502 1023 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 SLC45A3Q96JT2 553 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 MAGEB18Q96M61 343 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 CSF3RQ99062 836 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 MAPKAP1Q9BPZ7 522 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 MESP1Q9BRJ9 268 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 ROGDIQ9GZN7 287 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 ILKAPQ9H0C8 392 aaPredicted RBP8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 ACTL8Q9H568 366 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 CCDC134Q9H6E4 229 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 GPN2Q9H9Y4 310 aaPredicted RBP8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 LYRM4Q9HD34 91 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 MKKSQ9NPJ1 570 aaPredicted RBP8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 C14orf105Q9NVL8 296 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 TRPC4Q9UBN4 977 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 VPS29Q9UBQ0 182 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 ZNF282Q9UDV7 671 aaPredicted RBP8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 GIMAP2Q9UG22 337 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 NXT1Q9UKK6 140 aaKnown RBP8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 DAPP1Q9UN19 280 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 FARSAQ9Y285 508 aaKnown RBP8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 ASB4Q9Y574 426 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 FLNCQ14315 2725 aa8.19□□□□□ -1.1
CCDC90B-217ENST00000530253 TLN1Q9Y490 2541 aaKnown RBP8.18□□□□□ -1.1
CCDC90B-217ENST00000530253 A0A088AWK7 358 aa8.18□□□□□ -1.1
CCDC90B-217ENST00000530253 IGKV3D-11A0A0A0MRZ8 115 aa8.18□□□□□ -1.1
CCDC90B-217ENST00000530253 A0A1W2PQ72 361 aa8.18□□□□□ -1.1
CCDC90B-217ENST00000530253 OR2W5A6NFC9 320 aa8.18□□□□□ -1.1
CCDC90B-217ENST00000530253 SLC28A1O00337 649 aa8.18□□□□□ -1.1
CCDC90B-217ENST00000530253 GBAP04062 536 aa8.18□□□□□ -1.1
CCDC90B-217ENST00000530253 FHP07954 510 aa8.18□□□□□ -1.1
CCDC90B-217ENST00000530253 LINC00032P0C843 101 aa8.18□□□□□ -1.1
CCDC90B-217ENST00000530253 PIM1P11309 404 aaPredicted RBP8.18□□□□□ -1.1
CCDC90B-217ENST00000530253 RNH1P13489 461 aaKnown RBP8.18□□□□□ -1.1
CCDC90B-217ENST00000530253 ALOX15P16050 662 aaPredicted RBP8.18□□□□□ -1.1
CCDC90B-217ENST00000530253 ZNF10P21506 573 aaPredicted RBP8.18□□□□□ -1.1
CCDC90B-217ENST00000530253 IL10P22301 178 aa8.18□□□□□ -1.1
CCDC90B-217ENST00000530253 TIA1P31483 386 aaKnown RBP eCLIP8.18□□□□□ -1.1
CCDC90B-217ENST00000530253 SKP1P63208 163 aa8.18□□□□□ -1.1
CCDC90B-217ENST00000530253 RHAGQ02094 409 aa8.18□□□□□ -1.1
CCDC90B-217ENST00000530253 KLC1Q07866 573 aa8.18□□□□□ -1.1
CCDC90B-217ENST00000530253 PDCD2Q16342 344 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms