RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 PPICP45877 212 aa24.23■■□□□ 1.47
TSPAN4-217ENST00000527644 RPP38P78345 283 aaKnown RBP24.23■■□□□ 1.47
TSPAN4-217ENST00000527644 TNFAIP8L3Q5GJ75 292 aa24.23■■□□□ 1.47
TSPAN4-217ENST00000527644 SH2D4BQ5SQS7 431 aa24.23■■□□□ 1.47
TSPAN4-217ENST00000527644 RPTNQ6XPR3 784 aa24.23■■□□□ 1.47
TSPAN4-217ENST00000527644 DOLPP1Q86YN1 238 aa24.23■■□□□ 1.47
TSPAN4-217ENST00000527644 NUDCD3Q8IVD9 361 aa24.23■■□□□ 1.47
TSPAN4-217ENST00000527644 DDIASQ8IXT1 998 aa24.23■■□□□ 1.47
TSPAN4-217ENST00000527644 FAM57AQ8TBR7 257 aa24.23■■□□□ 1.47
TSPAN4-217ENST00000527644 SPPL2AQ8TCT8 520 aa24.23■■□□□ 1.47
TSPAN4-217ENST00000527644 DIO2Q92813 273 aa24.23■■□□□ 1.47
TSPAN4-217ENST00000527644 FCRL1Q96LA6 429 aa24.23■■□□□ 1.47
TSPAN4-217ENST00000527644 ZFP64Q9NPA5 681 aa24.23■■□□□ 1.47
TSPAN4-217ENST00000527644 EXO1Q9UQ84 846 aaKnown RBP24.23■■□□□ 1.47
TSPAN4-217ENST00000527644 MEMO1Q9Y316 297 aa24.23■■□□□ 1.47
TSPAN4-217ENST00000527644 TMED5Q9Y3A6 229 aa24.23■■□□□ 1.47
TSPAN4-217ENST00000527644 TMEM233B4DJY2 109 aa24.22■■□□□ 1.47
TSPAN4-217ENST00000527644 PLOD3O60568 738 aa24.22■■□□□ 1.47
TSPAN4-217ENST00000527644 TACR1P25103 407 aa24.22■■□□□ 1.47
TSPAN4-217ENST00000527644 MAGEA5P43359 124 aa24.22■■□□□ 1.47
TSPAN4-217ENST00000527644 SERPINB4P48594 390 aa24.22■■□□□ 1.47
TSPAN4-217ENST00000527644 PRSS53Q2L4Q9 553 aa24.22■■□□□ 1.47
TSPAN4-217ENST00000527644 PRR22Q8IZ63 422 aa24.22■■□□□ 1.47
TSPAN4-217ENST00000527644 EID3Q8N140 333 aa24.22■■□□□ 1.47
TSPAN4-217ENST00000527644 EGLN2Q96KS0 407 aa24.22■■□□□ 1.47
TSPAN4-217ENST00000527644 CCT7Q99832 543 aa24.22■■□□□ 1.47
TSPAN4-217ENST00000527644 DOHHQ9BU89 302 aa24.22■■□□□ 1.47
TSPAN4-217ENST00000527644 STMN4Q9H169 189 aaPredicted RBP24.22■■□□□ 1.47
TSPAN4-217ENST00000527644 CENPHQ9H3R5 247 aa24.22■■□□□ 1.47
TSPAN4-217ENST00000527644 LSM1O15116 133 aaKnown RBP24.21■■□□□ 1.47
TSPAN4-217ENST00000527644 TM9SF1O15321 606 aa24.21■■□□□ 1.47
TSPAN4-217ENST00000527644 PPM1BO75688 479 aa24.21■■□□□ 1.47
TSPAN4-217ENST00000527644 SLITRK5O94991 958 aa24.21■■□□□ 1.47
TSPAN4-217ENST00000527644 IGHG3P01860 377 aa24.21■■□□□ 1.47
TSPAN4-217ENST00000527644 ABCB1P08183 1280 aaPredicted RBP24.21■■□□□ 1.47
TSPAN4-217ENST00000527644 ARRB2P32121 409 aa24.21■■□□□ 1.47
TSPAN4-217ENST00000527644 NCBP2P52298 156 aaKnown RBP eCLIP24.21■■□□□ 1.475e-7■■■■□ 24.3
TSPAN4-217ENST00000527644 SLC10A1Q14973 349 aa24.21■■□□□ 1.47
TSPAN4-217ENST00000527644 NNATQ16517 81 aa24.21■■□□□ 1.47
TSPAN4-217ENST00000527644 RFTN2Q52LD8 501 aaPredicted RBP24.21■■□□□ 1.47
TSPAN4-217ENST00000527644 LRIG3Q6UXM1 1119 aa24.21■■□□□ 1.47
TSPAN4-217ENST00000527644 ITLN2Q8WWU7 325 aaPredicted RBP24.21■■□□□ 1.47
TSPAN4-217ENST00000527644 PGM2Q96G03 612 aa24.21■■□□□ 1.47
TSPAN4-217ENST00000527644 PHF12Q96QT6 1004 aa24.21■■□□□ 1.47
TSPAN4-217ENST00000527644 ANKRA2Q9H9E1 313 aa24.21■■□□□ 1.47
TSPAN4-217ENST00000527644 GPR55Q9Y2T6 319 aaPredicted RBP24.21■■□□□ 1.47
TSPAN4-217ENST00000527644 ACTL7BQ9Y614 415 aa24.21■■□□□ 1.47
TSPAN4-217ENST00000527644 ZNF407Q9C0G0 2248 aa24.2■■□□□ 1.47
TSPAN4-217ENST00000527644 ATP6AP2A0A1C7CYW4 349 aa24.2■■□□□ 1.46
TSPAN4-217ENST00000527644 FRG2CA6NGY1 282 aa24.2■■□□□ 1.46
TSPAN4-217ENST00000527644 PIP5K1BO14986 540 aa24.2■■□□□ 1.46
TSPAN4-217ENST00000527644 TO15178 435 aa24.2■■□□□ 1.46
TSPAN4-217ENST00000527644 ATP6AP2O75787 350 aa24.2■■□□□ 1.46
TSPAN4-217ENST00000527644 SNX4O95219 450 aa24.2■■□□□ 1.46
TSPAN4-217ENST00000527644 TPOP07202 933 aa24.2■■□□□ 1.46
TSPAN4-217ENST00000527644 NTSP30990 170 aa24.2■■□□□ 1.46
TSPAN4-217ENST00000527644 RPL38P63173 70 aaKnown RBP24.2■■□□□ 1.46
TSPAN4-217ENST00000527644 TMEM198Q66K66 360 aa24.2■■□□□ 1.46
TSPAN4-217ENST00000527644 HIST2H2BCQ6DN03 193 aa24.2■■□□□ 1.46
TSPAN4-217ENST00000527644 NUP54Q7Z3B4 507 aa24.2■■□□□ 1.46
TSPAN4-217ENST00000527644 MRGPRGQ86SM5 289 aa24.2■■□□□ 1.46
TSPAN4-217ENST00000527644 ZNF808Q8N4W9 903 aaPredicted RBP24.2■■□□□ 1.46
TSPAN4-217ENST00000527644 PPP1R14CQ8TAE6 165 aa24.2■■□□□ 1.46
TSPAN4-217ENST00000527644 AGR3Q8TD06 166 aa24.2■■□□□ 1.46
TSPAN4-217ENST00000527644 ANGPTL4Q9BY76 406 aa24.2■■□□□ 1.46
TSPAN4-217ENST00000527644 ZDHHC2Q9UIJ5 367 aa24.2■■□□□ 1.46
TSPAN4-217ENST00000527644 A0A1B0GVC2 190 aa24.19■■□□□ 1.46
TSPAN4-217ENST00000527644 CYSRT1A8MQ03 144 aa24.19■■□□□ 1.46
TSPAN4-217ENST00000527644 E9PLN8 166 aa24.19■■□□□ 1.46
TSPAN4-217ENST00000527644 BIRC5O15392 142 aa24.19■■□□□ 1.46
TSPAN4-217ENST00000527644 TRIM3O75382 744 aaPredicted RBP24.19■■□□□ 1.46
TSPAN4-217ENST00000527644 LRATO95237 230 aa24.19■■□□□ 1.46
TSPAN4-217ENST00000527644 JUNP05412 331 aaKnown RBP24.19■■□□□ 1.46
TSPAN4-217ENST00000527644 MYZAPP0CAP1 466 aa24.19■■□□□ 1.46
TSPAN4-217ENST00000527644 SDC1P18827 310 aa24.19■■□□□ 1.46
TSPAN4-217ENST00000527644 PLCXD2Q0VAA5 305 aa24.19■■□□□ 1.46
TSPAN4-217ENST00000527644 GALNTL6Q49A17 601 aa24.19■■□□□ 1.46
TSPAN4-217ENST00000527644 TRILQ7L0X0 811 aa24.19■■□□□ 1.46
TSPAN4-217ENST00000527644 OR7G2Q8NG99 324 aa24.19■■□□□ 1.46
TSPAN4-217ENST00000527644 OMA1Q96E52 524 aa24.19■■□□□ 1.46
TSPAN4-217ENST00000527644 ZNF764Q96H86 408 aaPredicted RBP24.19■■□□□ 1.46
TSPAN4-217ENST00000527644 PPP3R2Q96LZ3 170 aa24.19■■□□□ 1.46
TSPAN4-217ENST00000527644 JSRP1Q96MG2 331 aaPredicted RBP24.19■■□□□ 1.46
TSPAN4-217ENST00000527644 BTBD9Q96Q07 612 aa24.19■■□□□ 1.46
TSPAN4-217ENST00000527644 VKORC1Q9BQB6 163 aa24.19■■□□□ 1.46
TSPAN4-217ENST00000527644 ZNF703Q9H7S9 590 aaPredicted RBP24.19■■□□□ 1.46
TSPAN4-217ENST00000527644 QPCTLQ9NXS2 382 aa24.19■■□□□ 1.46
TSPAN4-217ENST00000527644 TAS2R9Q9NYW1 312 aa24.19■■□□□ 1.46
TSPAN4-217ENST00000527644 B4GALT7Q9UBV7 327 aa24.19■■□□□ 1.46
TSPAN4-217ENST00000527644 NINQ8N4C6 2090 aa24.19■■□□□ 1.46
TSPAN4-217ENST00000527644 DNAJC13O75165 2243 aa24.18■■□□□ 1.46
TSPAN4-217ENST00000527644 A0A087WV62 115 aa24.18■■□□□ 1.46
TSPAN4-217ENST00000527644 OR14I1A6ND48 311 aa24.18■■□□□ 1.46
TSPAN4-217ENST00000527644 LRRC3CA6NJW4 275 aa24.18■■□□□ 1.46
TSPAN4-217ENST00000527644 SUSD5O60279 629 aa24.18■■□□□ 1.46
TSPAN4-217ENST00000527644 ERLIN1O75477 346 aa24.18■■□□□ 1.46
TSPAN4-217ENST00000527644 CASP3P42574 277 aa24.18■■□□□ 1.46
TSPAN4-217ENST00000527644 SMSP52788 366 aa24.18■■□□□ 1.46
TSPAN4-217ENST00000527644 PSPHP78330 225 aa24.18■■□□□ 1.46
TSPAN4-217ENST00000527644 ADORA2A-AS1P86434 159 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms