RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 MXD1Q05195 221 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 EXOSC7Q15024 291 aaKnown RBP10.69□□□□□ -0.7
CLK4-206ENST00000520878 FAM214AQ32MH5 1076 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 ZNF658BQ4V348 819 aaPredicted RBP10.69□□□□□ -0.7
CLK4-206ENST00000520878 B3GNT7Q8NFL0 401 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 SLC7A13Q8TCU3 470 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 ZNF675Q8TD23 568 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 GGHQ92820 318 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 BORCS5Q969J3 196 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 Q96MT0 163 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 ZNF717Q9BY31 904 aaPredicted RBP10.69□□□□□ -0.7
CLK4-206ENST00000520878 DCSTAMPQ9H295 470 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 HMG20AQ9NP66 347 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 PHF11Q9UIL8 331 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 SLC6A14Q9UN76 642 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 SMIM30A4D0T7 59 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 KRBA1A5PL33 1030 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 OR2W5A6NFC9 320 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 CLCA1A8K7I4 914 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 A8MUA0 341 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 IFNGR2P38484 337 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 SLC35A2P78381 396 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 MVKQ03426 396 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 C1DQ13901 141 aaKnown RBP10.69□□□□□ -0.7
CLK4-206ENST00000520878 TSTQ16762 297 aaKnown RBP10.69□□□□□ -0.7
CLK4-206ENST00000520878 SLC48A1Q6P1K1 146 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 SLC15A4Q8N697 577 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 KIAA1958Q8N8K9 716 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 ITPAQ9BY32 194 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 SLC7A5P2Q9GIP4 190 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 ANKHQ9HCJ1 492 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 SIRT3Q9NTG7 399 aaPredicted RBP10.69□□□□□ -0.7
CLK4-206ENST00000520878 NTNG1Q9Y2I2 539 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 NAALAD2Q9Y3Q0 740 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 MTCL1Q9Y4B5 1905 aaKnown RBP10.69□□□□□ -0.7
CLK4-206ENST00000520878 A0A0A6YYD5 115 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 DUXAA6NLW8 204 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 CTSVO60911 334 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 RDH16O75452 317 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 DNAJB5O75953 348 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 OCM2P0CE71 109 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 OCMP0CE72 109 aaPredicted RBP10.69□□□□□ -0.7
CLK4-206ENST00000520878 MYL12AP19105 171 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 NOS3P29474 1203 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 PEBP1P30086 187 aaKnown RBP10.69□□□□□ -0.7
CLK4-206ENST00000520878 KCNJ5P48544 419 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 MAZP56270 477 aaKnown RBP10.69□□□□□ -0.7
CLK4-206ENST00000520878 C21orf58P58505 322 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 PPP1CAP62136 330 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 MINDY4Q4G0A6 757 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 KLHL12Q53G59 568 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 PRSS48Q7RTY5 328 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 PRSS41Q7RTY9 318 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 GPR32P1Q8NGA4 272 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 SUN3Q8TAQ9 357 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 GRHL3Q8TE85 626 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 PIK3R3Q92569 461 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 NUAK2Q9H093 628 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 LYARQ9NX58 379 aaKnown RBP10.69□□□□□ -0.7
CLK4-206ENST00000520878 ADAM29Q9UKF5 820 aa10.69□□□□□ -0.7
CLK4-206ENST00000520878 SZT2Q5T011 3432 aa10.68□□□□□ -0.7
CLK4-206ENST00000520878 PRAMEF25A6NGN4 478 aa10.68□□□□□ -0.7
CLK4-206ENST00000520878 A8MU76 341 aa10.68□□□□□ -0.7
CLK4-206ENST00000520878 C4orf51C9J302 202 aa10.68□□□□□ -0.7
CLK4-206ENST00000520878 ENTPD6O75354 484 aa10.68□□□□□ -0.7
CLK4-206ENST00000520878 KLHL18O94889 574 aa10.68□□□□□ -0.7
CLK4-206ENST00000520878 APBB3O95704 486 aa10.68□□□□□ -0.7
CLK4-206ENST00000520878 CHRM4P08173 479 aa10.68□□□□□ -0.7
CLK4-206ENST00000520878 GKN3PP0CG01 181 aa10.68□□□□□ -0.7
CLK4-206ENST00000520878 SAGP10523 405 aaPredicted RBP10.68□□□□□ -0.7
CLK4-206ENST00000520878 ITIH1P19827 911 aa10.68□□□□□ -0.7
CLK4-206ENST00000520878 GABRA3P34903 492 aa10.68□□□□□ -0.7
CLK4-206ENST00000520878 GPR4P46093 362 aa10.68□□□□□ -0.7
CLK4-206ENST00000520878 LSM11P83369 360 aaKnown RBP eCLIP10.68□□□□□ -0.7
CLK4-206ENST00000520878 DUSP2Q05923 314 aa10.68□□□□□ -0.7
CLK4-206ENST00000520878 KIR2DS3Q14952 304 aa10.68□□□□□ -0.7
CLK4-206ENST00000520878 INAQ16352 499 aa10.68□□□□□ -0.7
CLK4-206ENST00000520878 TRMT12Q53H54 448 aaKnown RBP10.68□□□□□ -0.7
CLK4-206ENST00000520878 SOWAHCQ53LP3 525 aaPredicted RBP10.68□□□□□ -0.7
CLK4-206ENST00000520878 FAHD1Q6P587 224 aa10.68□□□□□ -0.7
CLK4-206ENST00000520878 CHRDL2Q6WN34 429 aa10.68□□□□□ -0.7
CLK4-206ENST00000520878 SHFQ7M4L6 423 aa10.68□□□□□ -0.7
CLK4-206ENST00000520878 CADM2Q8N3J6 435 aa10.68□□□□□ -0.7
CLK4-206ENST00000520878 C10orf53Q8N6V4 93 aa10.68□□□□□ -0.7
CLK4-206ENST00000520878 BBS10Q8TAM1 723 aa10.68□□□□□ -0.7
CLK4-206ENST00000520878 RSC1A1Q92681 617 aa10.68□□□□□ -0.7
CLK4-206ENST00000520878 MUL1Q969V5 352 aa10.68□□□□□ -0.7
CLK4-206ENST00000520878 GAL3ST3Q96A11 431 aa10.68□□□□□ -0.7
CLK4-206ENST00000520878 ELP4Q96EB1 424 aa10.68□□□□□ -0.7
CLK4-206ENST00000520878 FAM46AQ96IP4 442 aaKnown RBP10.68□□□□□ -0.7
CLK4-206ENST00000520878 GABRG3Q99928 467 aa10.68□□□□□ -0.7
CLK4-206ENST00000520878 PITHD1Q9GZP4 211 aaPredicted RBP10.68□□□□□ -0.7
CLK4-206ENST00000520878 FBRSQ9HAH7 460 aa10.68□□□□□ -0.7
CLK4-206ENST00000520878 MGAT4BQ9UQ53 548 aa10.68□□□□□ -0.7
CLK4-206ENST00000520878 HSPE1-MOB4S4R3N1 261 aa10.68□□□□□ -0.7
CLK4-206ENST00000520878 A0A0A6YYC8 382 aaPredicted RBP10.68□□□□□ -0.7
CLK4-206ENST00000520878 PRAMEF26H0Y7S4 382 aa10.68□□□□□ -0.7
CLK4-206ENST00000520878 I3L1I5 382 aaPredicted RBP10.68□□□□□ -0.7
CLK4-206ENST00000520878 DNAJB6O75190 326 aa10.68□□□□□ -0.7
CLK4-206ENST00000520878 PORP16435 677 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms