RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 TCEAL4Q96EI5 215 aa16.76■□□□□ 0.27
NPHP4-209ENST00000489180 TGM7Q96PF1 710 aa16.76■□□□□ 0.27
NPHP4-209ENST00000489180 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.76■□□□□ 0.27
NPHP4-209ENST00000489180 MAN2C1Q9NTJ4 1040 aa16.76■□□□□ 0.27
NPHP4-209ENST00000489180 TMEM181Q9P2C4 612 aa16.76■□□□□ 0.27
NPHP4-209ENST00000489180 DNMT3AQ9Y6K1 912 aaPredicted RBP16.76■□□□□ 0.27
NPHP4-209ENST00000489180 GXYLT2A0PJZ3 443 aa16.76■□□□□ 0.27
NPHP4-209ENST00000489180 CREBL2O60519 120 aaPredicted RBP16.76■□□□□ 0.27
NPHP4-209ENST00000489180 PDSS1Q5T2R2 415 aa16.76■□□□□ 0.27
NPHP4-209ENST00000489180 LEG1Q6P5S2 330 aa16.76■□□□□ 0.27
NPHP4-209ENST00000489180 CYP4V2Q6ZWL3 525 aaPredicted RBP16.76■□□□□ 0.27
NPHP4-209ENST00000489180 UCHL1P09936 223 aa16.76■□□□□ 0.27
NPHP4-209ENST00000489180 ZNF14P17017 642 aaPredicted RBP16.76■□□□□ 0.27
NPHP4-209ENST00000489180 SSTR4P31391 388 aa16.76■□□□□ 0.27
NPHP4-209ENST00000489180 SPINT3P49223 89 aa16.76■□□□□ 0.27
NPHP4-209ENST00000489180 POU4F2Q12837 409 aa16.76■□□□□ 0.27
NPHP4-209ENST00000489180 GK3PQ14409 553 aa16.76■□□□□ 0.27
NPHP4-209ENST00000489180 CFAP77Q6ZQR2 320 aa16.76■□□□□ 0.27
NPHP4-209ENST00000489180 PAPD5Q8NDF8 572 aaKnown RBP16.76■□□□□ 0.27
NPHP4-209ENST00000489180 OR4C15Q8NGM1 316 aa16.76■□□□□ 0.27
NPHP4-209ENST00000489180 CNIH4Q9P003 139 aa16.76■□□□□ 0.27
NPHP4-209ENST00000489180 MAGED1Q9Y5V3 778 aaPredicted RBP16.76■□□□□ 0.27
NPHP4-209ENST00000489180 A0A1W2PQU0 124 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 FAM171A2A8MVW0 826 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 H7C417 338 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 DPP6P42658 865 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 LRP8Q14114 963 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 RANBP10Q6VN20 620 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 DEDD2Q8WXF8 326 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 WASF3Q9UPY6 502 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 FARS2O95363 451 aaKnown RBP16.75■□□□□ 0.27
NPHP4-209ENST00000489180 SLC16A8O95907 504 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 ANKRD54Q6NXT1 300 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 FIP1L1Q6UN15 594 aaKnown RBP16.75■□□□□ 0.27
NPHP4-209ENST00000489180 RAB11FIP2Q7L804 512 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 CSNK1A1LQ8N752 337 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 CHST14Q8NCH0 376 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 CD200R1Q8TD46 325 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 SLC41A3Q96GZ6 507 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 ZNF649Q9BS31 505 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 ACTR6Q9GZN1 396 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 A6NHS1 94 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 NPIPA2E9PIF3 369 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 NPIPA3F8WFD2 350 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 PTGESO14684 152 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 VEGFDO43915 354 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 ADAP00813 363 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 ART1P52961 327 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 ARHGAP11AQ6P4F7 1023 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 SERINC5Q86VE9 423 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 IGFN1Q86VF2 1251 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 LAS2Q8IYD9 372 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 SETD7Q8WTS6 366 aaKnown RBP16.75■□□□□ 0.27
NPHP4-209ENST00000489180 RGCCQ9H4X1 137 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 ENY2Q9NPA8 101 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 SDR39U1Q9NRG7 319 aaPredicted RBP16.75■□□□□ 0.27
NPHP4-209ENST00000489180 C19orf25Q9UFG5 118 aaPredicted RBP16.75■□□□□ 0.27
NPHP4-209ENST00000489180 TRIM64A6NGJ6 449 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 GOSR2O14653 212 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 PRKYO43930 277 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 OSMP13725 252 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 DRD2P14416 443 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 BAIAP2L2Q6UXY1 529 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 CHDHQ8NE62 594 aaPredicted RBP16.75■□□□□ 0.27
NPHP4-209ENST00000489180 NINJ1Q92982 152 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 FKBP10Q96AY3 582 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 SAMD8Q96LT4 415 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 KCNIP3Q9Y2W7 256 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 SIGLEC1Q9BZZ2 1709 aa16.75■□□□□ 0.27
NPHP4-209ENST00000489180 BORCS7-ASMTA0A0B4J1R7 106 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.74■□□□□ 0.27
NPHP4-209ENST00000489180 MYADML2A6NDP7 307 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 PPM1BO75688 479 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 ADRB3P13945 408 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 CDKN2CP42773 168 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 PTH2RP49190 550 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 PIN1Q13526 163 aaPredicted RBP16.74■□□□□ 0.27
NPHP4-209ENST00000489180 COMMD7Q86VX2 200 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 KLHDC8AQ8IYD2 350 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 ARFGAP1Q8N6T3 406 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 TRMT10AQ8TBZ6 339 aaKnown RBP16.74■□□□□ 0.27
NPHP4-209ENST00000489180 TMEM234Q8WY98 164 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 LMF1Q96S06 567 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 TIMM8BQ9Y5J9 83 aaPredicted RBP16.74■□□□□ 0.27
NPHP4-209ENST00000489180 RICTORQ6R327 1708 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 KCNJ13O60928 360 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 PPP1R3DO95685 299 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 PM20D1Q6GTS8 502 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 UBQLNLQ8IYU4 475 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 AVL9Q8NBF6 648 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 TBC1D15Q8TC07 691 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 WDR92Q96MX6 357 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 TEPSINQ96N21 525 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 FAM83CQ9BQN1 747 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 OR51E2Q9H255 320 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 ERVK-19Q9WJR5 959 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 RAD51DO75771 328 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 GPX3P22352 226 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 CA5AP35218 305 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 LRRTM3Q86VH5 581 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms