RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 MT-CO3P00414 261 aa9.69□□□□□ -0.86
USP39-210ENST00000459775 FTH1P19P0C7X4 201 aa9.69□□□□□ -0.86
USP39-210ENST00000459775 ACPPP15309 386 aa9.69□□□□□ -0.86
USP39-210ENST00000459775 DDCP20711 480 aa9.69□□□□□ -0.86
USP39-210ENST00000459775 CPN2P22792 545 aa9.69□□□□□ -0.86
USP39-210ENST00000459775 ADSLP30566 484 aaPredicted RBP9.69□□□□□ -0.86
USP39-210ENST00000459775 KIR3DL1P43629 444 aa9.69□□□□□ -0.86
USP39-210ENST00000459775 GCGRP47871 477 aa9.69□□□□□ -0.86
USP39-210ENST00000459775 EFNA3P52797 238 aa9.69□□□□□ -0.86
USP39-210ENST00000459775 MAPK10P53779 464 aa9.69□□□□□ -0.86
USP39-210ENST00000459775 CARD18P57730 90 aa9.69□□□□□ -0.86
USP39-210ENST00000459775 BTG2P78543 158 aa9.69□□□□□ -0.86
USP39-210ENST00000459775 TGM3Q08188 693 aa9.69□□□□□ -0.86
USP39-210ENST00000459775 PDE7AQ13946 482 aa9.69□□□□□ -0.86
USP39-210ENST00000459775 ISXQ2M1V0 245 aa9.69□□□□□ -0.86
USP39-210ENST00000459775 LACTB2Q53H82 288 aaPredicted RBP9.69□□□□□ -0.86
USP39-210ENST00000459775 MANEAQ5SRI9 462 aa9.69□□□□□ -0.86
USP39-210ENST00000459775 ZNF551Q7Z340 670 aaPredicted RBP9.69□□□□□ -0.86
USP39-210ENST00000459775 TMEM126BQ8IUX1 230 aa9.69□□□□□ -0.86
USP39-210ENST00000459775 COL27A1Q8IZC6 1860 aaPredicted RBP9.69□□□□□ -0.86
USP39-210ENST00000459775 CARFQ8N187 725 aa9.69□□□□□ -0.86
USP39-210ENST00000459775 TTC29Q8NA56 475 aaPredicted RBP9.69□□□□□ -0.86
USP39-210ENST00000459775 AGBL5Q8NDL9 886 aa9.69□□□□□ -0.86
USP39-210ENST00000459775 DNAJB14Q8TBM8 379 aa9.69□□□□□ -0.86
USP39-210ENST00000459775 GTF2H4Q92759 462 aa9.69□□□□□ -0.86
USP39-210ENST00000459775 CNRIP1Q96F85 164 aaPredicted RBP9.69□□□□□ -0.86
USP39-210ENST00000459775 DUSP26Q9BV47 211 aa9.69□□□□□ -0.86
USP39-210ENST00000459775 NEK6Q9HC98 313 aa9.69□□□□□ -0.86
USP39-210ENST00000459775 RPRD1BQ9NQG5 326 aaKnown RBP9.69□□□□□ -0.86
USP39-210ENST00000459775 ATP6V1HQ9UI12 483 aa9.69□□□□□ -0.86
USP39-210ENST00000459775 UTS2RQ9UKP6 389 aa9.69□□□□□ -0.86
USP39-210ENST00000459775 RARRES3Q9UL19 164 aa9.69□□□□□ -0.86
USP39-210ENST00000459775 FAM32AQ9Y421 112 aaKnown RBP9.69□□□□□ -0.86
USP39-210ENST00000459775 TGFBR3LH3BV60 316 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 FXYD1O00168 92 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 POLR1CO15160 346 aaPredicted RBP9.68□□□□□ -0.86
USP39-210ENST00000459775 SLC22A2O15244 555 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 SCRG1O75711 98 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 C6orf47O95873 294 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 GLAP06280 429 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 HPCAL1P37235 193 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 FOXO1Q12778 655 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 ART3Q13508 389 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 SELPLGQ14242 412 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 VWA2Q5GFL6 755 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 RABL3Q5HYI8 236 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 CDCP2Q5VXM1 449 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 FAM199XQ6PEV8 388 aaPredicted RBP9.68□□□□□ -0.86
USP39-210ENST00000459775 SEZ6L2Q6UXD5 910 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 DLEU7Q6UYE1 221 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 STX12Q86Y82 276 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 MSRB3Q8IXL7 192 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 DEFB107AQ8IZN7 70 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 FAM156AQ8NDB6 213 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 SIMC1Q8NDZ2 872 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 OR51Q1Q8NH59 317 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 SLC26A7Q8TE54 656 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 TESCQ96BS2 214 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 COQ8BQ96D53 544 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 NDC1Q9BTX1 674 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 CADM1Q9BY67 442 aaKnown RBP9.68□□□□□ -0.86
USP39-210ENST00000459775 IKZF5Q9H5V7 419 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 CCDC86Q9H6F5 360 aaKnown RBP9.68□□□□□ -0.86
USP39-210ENST00000459775 EFCAB1Q9HAE3 211 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 SLC22A11Q9NSA0 550 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 TXLNGQ9NUQ3 528 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 SLC25A37Q9NYZ2 338 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 VAPAQ9P0L0 249 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 DKK4Q9UBT3 224 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 CES1P1Q9UKY3 287 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 USP22Q9UPT9 525 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 ERVK-19Q9WJR5 959 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 LOXL2Q9Y4K0 774 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 PCDHA9Q9Y5H5 950 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 B3GALT1Q9Y5Z6 326 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 SCN2AQ99250 2005 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 FGF17O60258 216 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 CIDEAO60543 219 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 PDE5AO76074 875 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 PLATP00750 562 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 IL6P05231 212 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 PABPC4LP0CB38 370 aaKnown RBP9.68□□□□□ -0.86
USP39-210ENST00000459775 NR2F6P10588 404 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 PRDX6P30041 224 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 PPP2R1BP30154 601 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 PCP4P48539 62 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 ERFP50548 548 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 ACTN3Q08043 901 aaPredicted RBP9.68□□□□□ -0.86
USP39-210ENST00000459775 NFYCQ13952 458 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 HEPACAMQ14CZ8 416 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 SHEQ5VZ18 495 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 ASRGL1Q7L266 308 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 NLRC3Q7RTR2 1065 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 LAPTM4BQ86VI4 370 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 C10orf111Q8N326 155 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 ADCY4Q8NFM4 1077 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 OR5AK3PQ8NH89 298 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 PNPT1Q8TCS8 783 aaKnown RBP9.68□□□□□ -0.86
USP39-210ENST00000459775 UTP4Q969X6 686 aaKnown RBP9.68□□□□□ -0.86
USP39-210ENST00000459775 PPWD1Q96BP3 646 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms