RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 SLC30A4O14863 429 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 NTN1O95631 604 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 LALBAP00709 142 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 PTGER1P34995 402 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 IL18Q14116 193 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 FAM92BQ6ZTR7 304 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 TECPR1Q7Z6L1 1165 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 TMEM145Q8NBT3 493 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 OR4M1Q8NGD0 313 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 OR4K5Q8NGD3 323 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 UPRTQ96BW1 309 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 ZNF707Q96C28 371 aaPredicted RBP13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 MTERF3Q96E29 417 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 SENP5Q96HI0 755 aaPredicted RBP13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 ZSCAN5AQ9BUG6 496 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 HDHD5Q9BXW7 423 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 SERHL2Q9H4I8 314 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 IGFLR1Q9H665 355 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 FAM240BA0A1B0GVZ2 78 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 SHISA3A0PJX4 238 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 WASHC1A8K0Z3 465 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 NEDD8-MDP1E9PL57 170 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 LEFTY2O00292 366 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 NR2F6P10588 404 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 CYP2A6P11509 494 aaPredicted RBP13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 IFI30P13284 250 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 ZNF30P17039 623 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 AVPR1BP47901 424 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 MAP4K2Q12851 820 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 WASH2PQ6VEQ5 465 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 QSOX2Q6ZRP7 698 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 SLC30A8Q8IWU4 369 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 PEX5LQ8IYB4 626 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 CYB5D2Q8WUJ1 264 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 XAGE5Q8WWM1 108 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 EXOSC8Q96B26 276 aaKnown RBP13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 TIFAQ96CG3 184 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 AP2M1Q96CW1 435 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 WDR34Q96EX3 536 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 F2RL3Q96RI0 385 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 TREX2Q9BQ50 279 aaPredicted RBP13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 TMED9Q9BVK6 235 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 SGPP1Q9BX95 441 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 GALNT9Q9HCQ5 603 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 RBFOX1Q9NWB1 397 aaKnown RBP13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 MCUBQ9NWR8 336 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 PLPP1O14494 284 aa13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 TBX6O95947 436 aaPredicted RBP13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 PNLIPRP1P54315 467 aa13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 CTBP2P56545 445 aa13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 WSCD2Q2TBF2 565 aa13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 LAMTOR1Q6IAA8 161 aa13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 SLC9B2Q86UD5 537 aa13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 KIF18BQ86Y91 864 aa13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 ZNF366Q8N895 744 aa13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 DTX3Q8N9I9 347 aa13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 OR5H6Q8NGV6 325 aa13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 FGF11Q92914 225 aa13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 TRIM45Q9H8W5 580 aaPredicted RBP13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 TBC1D17Q9HA65 648 aa13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 SLC28A3Q9HAS3 691 aa13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 KLHL21Q9UJP4 597 aa13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 ICKQ9UPZ9 632 aa13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 OBSL1O75147 1896 aa13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 MTCL1Q9Y4B5 1905 aaKnown RBP13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 C12orf71A8MTZ7 269 aa13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 LYRM1O43325 122 aa13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 DDX5P17844 614 aaKnown RBP13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 WEE1P30291 646 aa13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 RECQLP46063 649 aaPredicted RBP13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 DCDC1P59894 354 aa13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 TPBGQ13641 420 aa13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 GRIN2CQ14957 1233 aa13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 CCDC85BQ15834 202 aaPredicted RBP13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 B3GLCTQ6Y288 498 aa13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 TRMT11Q7Z4G4 463 aaKnown RBP13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 LRRC56Q8IYG6 542 aaPredicted RBP13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 IL17RCQ8NAC3 791 aa13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 OR9A1PQ8NGU1 263 aa13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 OR5P2Q8WZ92 322 aa13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 AP3S1Q92572 193 aa13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 TM4SF18Q96CE8 201 aa13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 MED18Q9BUE0 208 aa13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 FNDC11Q9BVV2 318 aa13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 SIRT3Q9NTG7 399 aaPredicted RBP13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 MAN2C1Q9NTJ4 1040 aa13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 HSPB11Q9Y547 144 aa13.31□□□□□ -0.28
CLCNKA-202ENST00000375692 STK25O00506 426 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 DVL2O14641 736 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 ARHGEF9O43307 516 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 PLOD3O60568 738 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 MMP20O60882 483 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 OR2B3O76000 313 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 PDE9AO76083 593 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 CRYZL1O95825 349 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 CTSLP07711 333 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 FAM157BP0CG42 384 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 LIMS3P0CW19 117 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms