RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 KLHL31Q9H511 634 aa9.98□□□□□ -0.81
SMC3-201ENST00000361804 C3orf14Q9HBI5 128 aa9.98□□□□□ -0.81
SMC3-201ENST00000361804 PCDHGB2Q9Y5G2 931 aa9.98□□□□□ -0.81
SMC3-201ENST00000361804 A0A0G2JMP0 313 aa9.98□□□□□ -0.81
SMC3-201ENST00000361804 A0A0X1KG70 313 aa9.98□□□□□ -0.81
SMC3-201ENST00000361804 CPSF4LA6NMK7 179 aaKnown RBP9.98□□□□□ -0.81
SMC3-201ENST00000361804 C4orf51C9J302 202 aa9.98□□□□□ -0.81
SMC3-201ENST00000361804 NARSO43776 548 aaKnown RBP9.98□□□□□ -0.81
SMC3-201ENST00000361804 CHRM4P08173 479 aa9.98□□□□□ -0.81
SMC3-201ENST00000361804 DDCP20711 480 aa9.98□□□□□ -0.81
SMC3-201ENST00000361804 BSGP35613 385 aa9.98□□□□□ -0.81
SMC3-201ENST00000361804 GIPRP48546 466 aa9.98□□□□□ -0.81
SMC3-201ENST00000361804 CTBP2P56545 445 aa9.98□□□□□ -0.81
SMC3-201ENST00000361804 SNRPGP62308 76 aaKnown RBP9.98□□□□□ -0.81
SMC3-201ENST00000361804 SNRPNP63162 240 aaKnown RBP9.98□□□□□ -0.81
SMC3-201ENST00000361804 ZDHHC20Q5W0Z9 365 aa9.98□□□□□ -0.81
SMC3-201ENST00000361804 REM2Q8IYK8 340 aaPredicted RBP9.98□□□□□ -0.81
SMC3-201ENST00000361804 OR8J1Q8NGP2 316 aa9.98□□□□□ -0.81
SMC3-201ENST00000361804 FAM46AQ96IP4 442 aaKnown RBP9.98□□□□□ -0.81
SMC3-201ENST00000361804 TBX5Q99593 518 aa9.98□□□□□ -0.81
SMC3-201ENST00000361804 FAM83CQ9BQN1 747 aa9.98□□□□□ -0.81
SMC3-201ENST00000361804 RPL36Q9Y3U8 105 aaKnown RBP9.98□□□□□ -0.81
SMC3-201ENST00000361804 PTPN2P17706 415 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 PTX3P26022 381 aaPredicted RBP9.97□□□□□ -0.81
SMC3-201ENST00000361804 FUT5Q11128 374 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 GPAT3Q53EU6 434 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 RNASE12Q5GAN4 147 aaKnown RBP9.97□□□□□ -0.81
SMC3-201ENST00000361804 LRRTM4Q86VH4 590 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 YIPF7Q8N8F6 280 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 SMPDL3AQ92484 453 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 ZBED6CLQ96FA7 236 aaPredicted RBP9.97□□□□□ -0.81
SMC3-201ENST00000361804 ZNF354BQ96LW1 612 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 MAGEB10Q96LZ2 347 aaPredicted RBP9.97□□□□□ -0.81
SMC3-201ENST00000361804 TEFMQ96QE5 360 aaKnown RBP9.97□□□□□ -0.81
SMC3-201ENST00000361804 FNDC11Q9BVV2 318 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 AICDAQ9GZX7 198 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 ZCCHC3Q9NUD5 404 aaKnown RBP9.97□□□□□ -0.81
SMC3-201ENST00000361804 TRAPPC4Q9Y296 219 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 OR1F1O43749 312 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 GAS1P54826 345 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 SCN1BQ07699 218 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 CNIH2Q6PI25 160 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 PRICKLE2Q7Z3G6 844 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 KRT73Q86Y46 540 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 KREMEN2Q8NCW0 462 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 C19orf43Q9BQ61 176 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 SYNPO2LQ9H987 977 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 MAU2Q9Y6X3 613 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 MEN1O00255 615 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 PGRMC2O15173 223 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 DCDC1P59894 354 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 MLLT11Q13015 90 aaPredicted RBP9.97□□□□□ -0.81
SMC3-201ENST00000361804 NCF4Q15080 339 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 TATDN3Q17R31 274 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 KHDRBS2Q5VWX1 349 aaKnown RBP9.97□□□□□ -0.81
SMC3-201ENST00000361804 DPPA4Q7L190 304 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 UBE3DQ7Z6J8 389 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 FAM129CQ86XR2 697 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 PROKR2Q8NFJ6 384 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 ARRDC3Q96B67 414 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 CXorf40BQ96DE9 158 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 GLIPR2Q9H4G4 154 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 C6orf106Q9H6K1 298 aaPredicted RBP9.97□□□□□ -0.81
SMC3-201ENST00000361804 TRPV5Q9NQA5 729 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 LRP4O75096 1905 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 CASKO14936 926 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 PIPP12273 146 aaPredicted RBP9.97□□□□□ -0.81
SMC3-201ENST00000361804 C6P13671 934 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 CELP19835 753 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 DDOSTP39656 456 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 GPR4P46093 362 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 STXBP1P61764 594 aaKnown RBP9.97□□□□□ -0.81
SMC3-201ENST00000361804 C1DQ13901 141 aaKnown RBP9.97□□□□□ -0.81
SMC3-201ENST00000361804 EFR3AQ14156 821 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 FAM27D1Q5T7N8 215 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 METTL3Q86U44 580 aaKnown RBP9.97□□□□□ -0.81
SMC3-201ENST00000361804 NOXA1Q86UR1 476 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 LAPTM4BQ86VI4 370 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 VRK2Q86Y07 508 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 CCDC116Q8IYX3 515 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 DTD2Q96FN9 168 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 TTTY10Q9BZA0 68 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 GALNT9Q9HCQ5 603 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 MGAT4BQ9UQ53 548 aa9.97□□□□□ -0.81
SMC3-201ENST00000361804 FAM172BPA6NC97 362 aa9.96□□□□□ -0.81
SMC3-201ENST00000361804 NOTOA8MTQ0 251 aa9.96□□□□□ -0.81
SMC3-201ENST00000361804 PRRT4C9JH25 899 aa9.96□□□□□ -0.81
SMC3-201ENST00000361804 FAAHO00519 579 aa9.96□□□□□ -0.81
SMC3-201ENST00000361804 POLR1CO15160 346 aaPredicted RBP9.96□□□□□ -0.81
SMC3-201ENST00000361804 LZTS3O60299 673 aaPredicted RBP9.96□□□□□ -0.81
SMC3-201ENST00000361804 PIP5K1CO60331 668 aa9.96□□□□□ -0.81
SMC3-201ENST00000361804 MPZL2O60487 215 aa9.96□□□□□ -0.81
SMC3-201ENST00000361804 FGF18O76093 207 aa9.96□□□□□ -0.81
SMC3-201ENST00000361804 CXCL14O95715 111 aa9.96□□□□□ -0.81
SMC3-201ENST00000361804 RAB36O95755 333 aa9.96□□□□□ -0.81
SMC3-201ENST00000361804 KRR1Q13601 381 aaKnown RBP9.96□□□□□ -0.81
SMC3-201ENST00000361804 IL18Q14116 193 aa9.96□□□□□ -0.81
SMC3-201ENST00000361804 PIP5KL1Q5T9C9 394 aa9.96□□□□□ -0.81
SMC3-201ENST00000361804 ZNF793Q6ZN11 406 aa9.96□□□□□ -0.81
SMC3-201ENST00000361804 ENKURQ8TC29 256 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms