RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 OPALINQ96PE5 141 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 FCRL4Q96PJ5 515 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 GPA33Q99795 319 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 QRSL1Q9H0R6 528 aaKnown RBP13.7□□□□□ -0.22
TPM3-206ENST00000330188 ANKRA2Q9H9E1 313 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 LSM2Q9Y333 95 aaKnown RBP13.7□□□□□ -0.22
TPM3-206ENST00000330188 GOLGA4Q13439 2230 aaKnown RBP13.69□□□□□ -0.22
TPM3-206ENST00000330188 CCRL2O00421 344 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 BTN3A3O00478 584 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 NARSO43776 548 aaKnown RBP13.69□□□□□ -0.22
TPM3-206ENST00000330188 HOXC4P09017 264 aaPredicted RBP13.69□□□□□ -0.22
TPM3-206ENST00000330188 HOXB2P14652 356 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 CSTF2P33240 577 aaKnown RBP eCLIP13.69□□□□□ -0.22
TPM3-206ENST00000330188 MPIP34949 423 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 KIAA1024LP59773 190 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 SNRPNP63162 240 aaKnown RBP13.69□□□□□ -0.22
TPM3-206ENST00000330188 RHAGQ02094 409 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 ZNF91Q05481 1191 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 NCF4Q15080 339 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 NDUFA9Q16795 377 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 ATAT1Q5SQI0 421 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 SDE2Q6IQ49 451 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 C1orf94Q6P1W5 598 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 ENPP7Q6UWV6 458 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 BCDIN3DQ7Z5W3 292 aaKnown RBP13.69□□□□□ -0.22
TPM3-206ENST00000330188 LINC00471Q8N535 108 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 KCT2Q8NC54 265 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 GAL3ST3Q96A11 431 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 C6orf62Q9GZU0 229 aaPredicted RBP13.69□□□□□ -0.22
TPM3-206ENST00000330188 SLC38A1Q9H2H9 487 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 EQTNQ9NQ60 294 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 CTPS2Q9NRF8 586 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 GIMAP4Q9NUV9 329 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 LYARQ9NX58 379 aaKnown RBP13.69□□□□□ -0.22
TPM3-206ENST00000330188 TVP23BQ9NYZ1 205 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 CA5BQ9Y2D0 317 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 KRBA1A5PL33 1030 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 AGAP5A6NIR3 686 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 BTN3A2P78410 334 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 LTB4RQ15722 352 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 OCLNQ16625 522 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 TPRG1LQ5T0D9 272 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 DGLUCYQ7Z3D6 616 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 NRROSQ86YC3 692 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 CACTIN-AS1Q8N1I8 211 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 ASB12Q8WXK4 309 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 TMEM80Q96HE8 168 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 NEURL2Q9BR09 285 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 TSSK6Q9BXA6 273 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 FBRSQ9HAH7 460 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 C3orf14Q9HBI5 128 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 ZNF624Q9P2J8 865 aaPredicted RBP13.69□□□□□ -0.22
TPM3-206ENST00000330188 CLEC2DQ9UHP7 191 aa13.69□□□□□ -0.22
TPM3-206ENST00000330188 RPL36Q9Y3U8 105 aaKnown RBP13.69□□□□□ -0.22
TPM3-206ENST00000330188 SCN3AQ9NY46 2000 aa13.68□□□□□ -0.22
TPM3-206ENST00000330188 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.68□□□□□ -0.22
TPM3-206ENST00000330188 H0Y8X5 98 aa13.68□□□□□ -0.22
TPM3-206ENST00000330188 TAF4O00268 1085 aa13.68□□□□□ -0.22
TPM3-206ENST00000330188 SYT5O00445 386 aa13.68□□□□□ -0.22
TPM3-206ENST00000330188 ASNA1O43681 348 aa13.68□□□□□ -0.22
TPM3-206ENST00000330188 PRKYO43930 277 aa13.68□□□□□ -0.22
TPM3-206ENST00000330188 CSO75390 466 aaKnown RBP13.68□□□□□ -0.22
TPM3-206ENST00000330188 KLF8O95600 359 aaPredicted RBP13.68□□□□□ -0.22
TPM3-206ENST00000330188 EGFP01133 1207 aa13.68□□□□□ -0.22
TPM3-206ENST00000330188 NR2F6P10588 404 aa13.68□□□□□ -0.22
TPM3-206ENST00000330188 CKMT1AP12532 417 aa13.68□□□□□ -0.22
TPM3-206ENST00000330188 NDUFS1P28331 727 aa13.68□□□□□ -0.22
TPM3-206ENST00000330188 CD97P48960 835 aa13.68□□□□□ -0.22
TPM3-206ENST00000330188 RPS15AP62244 130 aaKnown RBP13.68□□□□□ -0.22
TPM3-206ENST00000330188 CHRNEQ04844 493 aa13.68□□□□□ -0.22
TPM3-206ENST00000330188 TGM3Q08188 693 aa13.68□□□□□ -0.22
TPM3-206ENST00000330188 TIMM50Q3ZCQ8 353 aa13.68□□□□□ -0.22
TPM3-206ENST00000330188 PPP2R2DQ66LE6 453 aa13.68□□□□□ -0.22
TPM3-206ENST00000330188 TUBA3EQ6PEY2 450 aa13.68□□□□□ -0.22
TPM3-206ENST00000330188 CCL4L1Q8NHW4 92 aa13.68□□□□□ -0.22
TPM3-206ENST00000330188 GIMAP5Q96F15 307 aa13.68□□□□□ -0.22
TPM3-206ENST00000330188 C10orf90Q96M02 699 aa13.68□□□□□ -0.22
TPM3-206ENST00000330188 POLDIP3Q9BY77 421 aaKnown RBP13.68□□□□□ -0.22
TPM3-206ENST00000330188 HHATLQ9HCP6 504 aa13.68□□□□□ -0.22
TPM3-206ENST00000330188 TRNAU1APQ9NX07 287 aaKnown RBP13.68□□□□□ -0.22
TPM3-206ENST00000330188 ZNF780BQ9Y6R6 833 aa13.68□□□□□ -0.22
TPM3-206ENST00000330188 KIAA0513O60268 411 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 ALPPP05187 535 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 SCG5P05408 212 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 ZNF888P0CJ79 500 aaPredicted RBP13.67□□□□□ -0.22
TPM3-206ENST00000330188 PCYT1AP49585 367 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 RPS3AP61247 264 aaKnown RBP13.67□□□□□ -0.22
TPM3-206ENST00000330188 CDK5Q00535 292 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 NFATC4Q14934 902 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 ZNF311Q5JNZ3 666 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 ENTPD8Q5MY95 495 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 ACSM5Q6NUN0 579 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 PLEKHG7Q6ZR37 379 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 MTSS1LQ765P7 747 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 ASPGQ86U10 573 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 VRK2Q86Y07 508 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 CYP4Z2PQ8N1L4 340 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 CLIP4Q8N3C7 705 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 FAM26EQ8N5C1 309 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 FLVCR1-AS1Q8TAF5 88 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms