RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 COPS7AQ9UBW8 275 aa7.93□□□□□ -1.14
SGMS1-211ENST00000626236 TAGLN3Q9UI15 199 aa7.93□□□□□ -1.14
SGMS1-211ENST00000626236 VPS4AQ9UN37 437 aa7.93□□□□□ -1.14
SGMS1-211ENST00000626236 ERVK-11Q9UQG0 969 aa7.93□□□□□ -1.14
SGMS1-211ENST00000626236 MAN2B2Q9Y2E5 1009 aa7.93□□□□□ -1.14
SGMS1-211ENST00000626236 AHCTF1Q8WYP5 2266 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 A0A096LPI6 279 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 TRBV11-1A0A0K0K1C0 115 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 A0A1W2PQ72 361 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 TMEM8BA6NDV4 472 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 ARGFXA6NJG6 315 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 CCT8L1PA6NM43 557 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 TAF4O00268 1085 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 UPK1AO00322 258 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 PLOD2O00469 737 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 AIM2O14862 343 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 EMC8O43402 210 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 PLOD3O60568 738 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 COQ9O75208 318 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 BCAS2O75934 225 aaPredicted RBP7.92□□□□□ -1.14
SGMS1-211ENST00000626236 CBX6O95503 412 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 CBX7O95931 251 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 CLPSP04118 112 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 CELA2AP08217 269 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 ESRRAP11474 423 aaPredicted RBP7.92□□□□□ -1.14
SGMS1-211ENST00000626236 S1PR1P21453 382 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 UQCRC2P22695 453 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 CHI3L1P36222 383 aaPredicted RBP7.92□□□□□ -1.14
SGMS1-211ENST00000626236 TRPC1P48995 793 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 CCT3P49368 545 aaKnown RBP7.92□□□□□ -1.14
SGMS1-211ENST00000626236 NUDT2P50583 147 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 PRR5P85299 388 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 TLE3Q04726 772 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 FUT7Q11130 342 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 DUSP8Q13202 625 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 TP53BP2Q13625 1128 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 NFYCQ13952 458 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 KRT72Q14CN4 511 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 GTDC1Q4AE62 458 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 CRTC2Q53ET0 693 aaPredicted RBP7.92□□□□□ -1.14
SGMS1-211ENST00000626236 COQ5Q5HYK3 327 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 FHL5Q5TD97 284 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 ANGPTL8Q6UXH0 198 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 TMEM64Q6YI46 380 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 RNF111Q6ZNA4 994 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 DHDDSQ86SQ9 333 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 OR2L13Q8N349 312 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 KIF2BQ8N4N8 673 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 DPP10Q8N608 796 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 PCYOX1LQ8NBM8 494 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 OR7G1Q8NGA0 311 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 DNAJB8Q8NHS0 232 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 PSMA8Q8TAA3 256 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 M1APQ8TC57 530 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 SFXN5Q8TD22 340 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 THAP4Q8WY91 577 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 MOAP1Q96BY2 351 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 FAM120BQ96EK7 910 aaKnown RBP7.92□□□□□ -1.14
SGMS1-211ENST00000626236 VMP1Q96GC9 406 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 NSL1Q96IY1 281 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 IMMP1LQ96LU5 166 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 FER1L6-AS2Q96M78 137 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 SLC35A5Q9BS91 424 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 NUDT9Q9BW91 350 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 TRIM4Q9C037 500 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 PAIP1Q9H074 479 aaKnown RBP7.92□□□□□ -1.14
SGMS1-211ENST00000626236 OR10A5Q9H207 317 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 EFCAB1Q9HAE3 211 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 CPNE5Q9HCH3 593 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 EQTNQ9NQ60 294 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.92□□□□□ -1.14
SGMS1-211ENST00000626236 SLAMF8Q9P0V8 285 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 MAP10Q9P2G4 905 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.92□□□□□ -1.14
SGMS1-211ENST00000626236 ZNF639Q9UID6 485 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 PPIEQ9UNP9 301 aaKnown RBP7.92□□□□□ -1.14
SGMS1-211ENST00000626236 C19orf53Q9UNZ5 99 aaPredicted RBP7.92□□□□□ -1.14
SGMS1-211ENST00000626236 POLHQ9Y253 713 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 PCDHB14Q9Y5E9 798 aa7.92□□□□□ -1.14
SGMS1-211ENST00000626236 NUP214P35658 2090 aaPredicted RBP7.91□□□□□ -1.14
SGMS1-211ENST00000626236 NCOR2Q9Y618 2525 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 DMXL2Q8TDJ6 3036 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 LAMA5O15230 3695 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 A0A087WV62 115 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 PRAMEF2O60811 474 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 NME6O75414 186 aaPredicted RBP7.91□□□□□ -1.14
SGMS1-211ENST00000626236 ERN1O75460 977 aaKnown RBP7.91□□□□□ -1.14
SGMS1-211ENST00000626236 UBOX5O94941 541 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 C1QCP02747 245 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 IGKV3-11P04433 115 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 IFI6P09912 130 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 ICAM2P13598 275 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 ITPKBP27987 946 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 EMDP50402 254 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 CLCN2P51788 898 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 GPR143P51810 404 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 RRADP55042 308 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 CASP9P55211 416 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 SLC37A1P57057 533 aa7.91□□□□□ -1.14
SGMS1-211ENST00000626236 TMPRSS3P57727 454 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms