RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 PANX1Q96RD7 426 aa11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 OR10A5Q9H207 317 aa11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 EPS8L2Q9H6S3 715 aa11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 ANKRA2Q9H9E1 313 aa11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 CPNE5Q9HCH3 593 aa11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 ATP13A2Q9NQ11 1180 aa11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 SLC6A13Q9NSD5 602 aa11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 DDX18Q9NVP1 670 aaKnown RBP11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 SLAMF8Q9P0V8 285 aa11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 MAP10Q9P2G4 905 aa11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 COPS7AQ9UBW8 275 aa11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 GMEB1Q9Y692 573 aa11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 CELSR3Q9NYQ7 3312 aa11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 ARGFXA6NJG6 315 aa11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 OR6C76A6NM76 312 aa11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 EMC8O43402 210 aa11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 PRAMEF2O60811 474 aa11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 ERN1O75460 977 aaKnown RBP11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 BCAS2O75934 225 aaPredicted RBP11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 ABCB1P08183 1280 aaPredicted RBP11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 UQCRC2P22695 453 aa11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 CCT3P49368 545 aaKnown RBP11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 CLCN2P51788 898 aa11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 STX5Q13190 355 aa11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 EBPQ15125 230 aaKnown RBP11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 DEFB109BQ30KR1 87 aa11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 GTDC1Q4AE62 458 aa11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 C6orf10Q5SRN2 563 aa11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 REP15Q6BDI9 236 aa11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 RNF111Q6ZNA4 994 aa11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 TRPM8Q7Z2W7 1104 aa11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 MSRB3Q8IXL7 192 aa11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 C9orf40Q8IXQ3 194 aa11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 KBTBD2Q8IY47 623 aa11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 ARMC10Q8N2F6 343 aa11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 OR56A1Q8NGH5 318 aa11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 C16orf52Q8NHV5 167 aa11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 PSMF1Q92530 271 aa11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 HOXB13Q92826 284 aaPredicted RBP11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 MOAP1Q96BY2 351 aa11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 CMTM5Q96DZ9 223 aa11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 VSTM2LQ96N03 204 aa11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 ING2Q9H160 280 aa11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 ZCCHC3Q9NUD5 404 aaKnown RBP11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 ARL8BQ9NVJ2 186 aa11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 SLC25A37Q9NYZ2 338 aa11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 VPS4AQ9UN37 437 aa11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 KCNMB2Q9Y691 235 aa11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 DMXL2Q8TDJ6 3036 aa11.75□□□□□ -0.53
CHMP2A-206ENST00000600118 SCN2AQ99250 2005 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 ACACBO00763 2458 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 TRBV11-1A0A0K0K1C0 115 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 RNF103-CHMP3A0A140T963 221 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 TMEM200CA6NKL6 621 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 FXYD1O00168 92 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 MRASO14807 208 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 PRKNO60260 465 aaPredicted RBP11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 COQ9O75208 318 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 NME6O75414 186 aaPredicted RBP11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 ZFAND5O76080 213 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 C1QCP02747 245 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 GSNP06396 782 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 ITGAMP11215 1152 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 MAP3K8P41279 467 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 AP2B1P63010 937 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 RNF4P78317 190 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 PRR5P85299 388 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 CHAF1BQ13112 559 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 SAXO2Q658L1 398 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 H3F3CQ6NXT2 135 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 JMJD6Q6NYC1 403 aaPredicted RBP11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 DNAJC14Q6Y2X3 702 aaPredicted RBP11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 HSDL2Q6YN16 418 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 ZNF621Q6ZSS3 439 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 CLEC4FQ8N1N0 589 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 ZNF441Q8N8Z8 693 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 CLEC1AQ8NC01 280 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 NUP43Q8NFH3 380 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 DNAJB8Q8NHS0 232 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 NUBPLQ8TB37 319 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 ZFP90Q8TF47 636 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 NEURL3Q96EH8 262 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 MAGED4Q96JG8 741 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 MS4A4EQ96PG1 132 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 NPAS2Q99743 824 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 SLC35A5Q9BS91 424 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 C3orf14Q9HBI5 128 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 GPATCH2Q9NW75 528 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 PRODH2Q9UF12 536 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 ZMIZ1Q9ULJ6 1067 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 CFL2Q9Y281 166 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 DTX4Q9Y2E6 619 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 PCDHB14Q9Y5E9 798 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 HEMK1Q9Y5R4 338 aaPredicted RBP11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 SNX8Q9Y5X2 465 aa11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 ANKRD11Q6UB99 2663 aaPredicted RBP11.74□□□□□ -0.53
CHMP2A-206ENST00000600118 ZFHX4Q86UP3 3567 aa11.73□□□□□ -0.53
CHMP2A-206ENST00000600118 CCT8L1PA6NM43 557 aa11.73□□□□□ -0.53
CHMP2A-206ENST00000600118 CEACAM4O75871 244 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms