RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 FHL5Q5TD97 284 aa12.79□□□□□ -0.36
UPF1-205ENST00000598209 TAGAPQ8N103 731 aa12.79□□□□□ -0.36
UPF1-205ENST00000598209 POGLUT1Q8NBL1 392 aa12.79□□□□□ -0.36
UPF1-205ENST00000598209 SIMC1Q8NDZ2 872 aa12.79□□□□□ -0.36
UPF1-205ENST00000598209 CLHC1Q8NHS4 586 aa12.79□□□□□ -0.36
UPF1-205ENST00000598209 KAT2AQ92830 837 aa12.79□□□□□ -0.36
UPF1-205ENST00000598209 ADIPOR1Q96A54 375 aa12.79□□□□□ -0.36
UPF1-205ENST00000598209 TP53INP1Q96A56 240 aa12.79□□□□□ -0.36
UPF1-205ENST00000598209 ARL8AQ96BM9 186 aa12.79□□□□□ -0.36
UPF1-205ENST00000598209 SPACA9Q96E40 222 aaPredicted RBP12.79□□□□□ -0.36
UPF1-205ENST00000598209 DEPPQ9NTK1 212 aa12.79□□□□□ -0.36
UPF1-205ENST00000598209 RYDENQ9NUL5 291 aaKnown RBP12.79□□□□□ -0.36
UPF1-205ENST00000598209 NKIRAS1Q9NYS0 192 aa12.79□□□□□ -0.36
UPF1-205ENST00000598209 BAIAP2L1Q9UHR4 511 aa12.79□□□□□ -0.36
UPF1-205ENST00000598209 CFL2Q9Y281 166 aa12.79□□□□□ -0.36
UPF1-205ENST00000598209 DTX4Q9Y2E6 619 aa12.79□□□□□ -0.36
UPF1-205ENST00000598209 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.79□□□□□ -0.36
UPF1-205ENST00000598209 POLEQ07864 2286 aa12.79□□□□□ -0.36
UPF1-205ENST00000598209 CLEC18AA5D8T8 446 aa12.78□□□□□ -0.36
UPF1-205ENST00000598209 AKAP10O43572 662 aa12.78□□□□□ -0.36
UPF1-205ENST00000598209 WISP2O76076 250 aa12.78□□□□□ -0.36
UPF1-205ENST00000598209 JUNP05412 331 aaKnown RBP12.78□□□□□ -0.36
UPF1-205ENST00000598209 FBXO45P0C2W1 286 aa12.78□□□□□ -0.36
UPF1-205ENST00000598209 CCL3P10147 92 aa12.78□□□□□ -0.36
UPF1-205ENST00000598209 BCKDHAP12694 445 aa12.78□□□□□ -0.36
UPF1-205ENST00000598209 ZNF24P17028 368 aa12.78□□□□□ -0.36
UPF1-205ENST00000598209 MAPK1P28482 360 aa12.78□□□□□ -0.36
UPF1-205ENST00000598209 RFC3P40938 356 aa12.78□□□□□ -0.36
UPF1-205ENST00000598209 ASMTP46597 345 aa12.78□□□□□ -0.36
UPF1-205ENST00000598209 RPL14P50914 215 aaKnown RBP12.78□□□□□ -0.36
UPF1-205ENST00000598209 NCBP2P52298 156 aaKnown RBP eCLIP12.78□□□□□ -0.36
UPF1-205ENST00000598209 KCNK10P57789 538 aa12.78□□□□□ -0.36
UPF1-205ENST00000598209 PDCD2Q16342 344 aaPredicted RBP12.78□□□□□ -0.36
UPF1-205ENST00000598209 RNFT1Q5M7Z0 435 aa12.78□□□□□ -0.36
UPF1-205ENST00000598209 C6orf136Q5SQH8 315 aa12.78□□□□□ -0.36
UPF1-205ENST00000598209 ANKRD26P1Q6NSI1 321 aa12.78□□□□□ -0.36
UPF1-205ENST00000598209 CLEC18BQ6UXF7 455 aa12.78□□□□□ -0.36
UPF1-205ENST00000598209 GFRALQ6UXV0 394 aa12.78□□□□□ -0.36
UPF1-205ENST00000598209 TMEM64Q6YI46 380 aa12.78□□□□□ -0.36
UPF1-205ENST00000598209 HDXQ7Z353 690 aa12.78□□□□□ -0.36
UPF1-205ENST00000598209 DND1Q8IYX4 353 aaKnown RBP12.78□□□□□ -0.36
UPF1-205ENST00000598209 FAM26EQ8N5C1 309 aa12.78□□□□□ -0.36
UPF1-205ENST00000598209 FNDC5Q8NAU1 212 aa12.78□□□□□ -0.36
UPF1-205ENST00000598209 CLEC18CQ8NCF0 446 aa12.78□□□□□ -0.36
UPF1-205ENST00000598209 FAM13CQ8NE31 585 aa12.78□□□□□ -0.36
UPF1-205ENST00000598209 C17orf47Q8NEP4 570 aa12.78□□□□□ -0.36
UPF1-205ENST00000598209 TUBGCP3Q96CW5 907 aa12.78□□□□□ -0.36
UPF1-205ENST00000598209 ERP27Q96DN0 273 aa12.78□□□□□ -0.36
UPF1-205ENST00000598209 C1orf50Q9BV19 199 aa12.78□□□□□ -0.36
UPF1-205ENST00000598209 ITPAQ9BY32 194 aa12.78□□□□□ -0.36
UPF1-205ENST00000598209 NXF5Q9H1B4 397 aaKnown RBP12.78□□□□□ -0.36
UPF1-205ENST00000598209 TSPAN10Q9H1Z9 355 aaPredicted RBP12.78□□□□□ -0.36
UPF1-205ENST00000598209 REEP4Q9H6H4 257 aa12.78□□□□□ -0.36
UPF1-205ENST00000598209 ANKRA2Q9H9E1 313 aa12.78□□□□□ -0.36
UPF1-205ENST00000598209 SACM1LQ9NTJ5 587 aa12.78□□□□□ -0.36
UPF1-205ENST00000598209 SEC14L3Q9UDX4 400 aa12.78□□□□□ -0.36
UPF1-205ENST00000598209 PRODH2Q9UF12 536 aa12.78□□□□□ -0.36
UPF1-205ENST00000598209 HAO1Q9UJM8 370 aa12.78□□□□□ -0.36
UPF1-205ENST00000598209 A0A0G2JMM0 328 aa12.77□□□□□ -0.37
UPF1-205ENST00000598209 A0A1W2PPB8 328 aa12.77□□□□□ -0.37
UPF1-205ENST00000598209 A0A1W2PRS3 328 aa12.77□□□□□ -0.37
UPF1-205ENST00000598209 KIR3DP1A8MWS1 328 aa12.77□□□□□ -0.37
UPF1-205ENST00000598209 NPIPA5E9PKD4 350 aa12.77□□□□□ -0.37
UPF1-205ENST00000598209 G3V3Y1 287 aa12.77□□□□□ -0.37
UPF1-205ENST00000598209 BCAS2O75934 225 aaPredicted RBP12.77□□□□□ -0.37
UPF1-205ENST00000598209 UNC5CO95185 931 aa12.77□□□□□ -0.37
UPF1-205ENST00000598209 P04436 131 aa12.77□□□□□ -0.37
UPF1-205ENST00000598209 CNR1P21554 472 aa12.77□□□□□ -0.37
UPF1-205ENST00000598209 EMDP50402 254 aa12.77□□□□□ -0.37
UPF1-205ENST00000598209 NRG3P56975 720 aa12.77□□□□□ -0.37
UPF1-205ENST00000598209 UBAP2LQ14157 1087 aaKnown RBP12.77□□□□□ -0.37
UPF1-205ENST00000598209 NNATQ16517 81 aa12.77□□□□□ -0.37
UPF1-205ENST00000598209 ZNF385BQ569K4 471 aa12.77□□□□□ -0.37
UPF1-205ENST00000598209 SLC22A10Q63ZE4 541 aa12.77□□□□□ -0.37
UPF1-205ENST00000598209 SIAH3Q8IW03 269 aa12.77□□□□□ -0.37
UPF1-205ENST00000598209 PRR22Q8IZ63 422 aa12.77□□□□□ -0.37
UPF1-205ENST00000598209 KIRREL3Q8IZU9 778 aa12.77□□□□□ -0.37
UPF1-205ENST00000598209 LIX1Q8N485 282 aa12.77□□□□□ -0.37
UPF1-205ENST00000598209 ZFP62Q8NB50 900 aaPredicted RBP12.77□□□□□ -0.37
UPF1-205ENST00000598209 OR2M7Q8NG81 312 aa12.77□□□□□ -0.37
UPF1-205ENST00000598209 OR7G2Q8NG99 324 aa12.77□□□□□ -0.37
UPF1-205ENST00000598209 OR10G3Q8NGC4 313 aa12.77□□□□□ -0.37
UPF1-205ENST00000598209 PPCDCQ96CD2 204 aa12.77□□□□□ -0.37
UPF1-205ENST00000598209 ZNF764Q96H86 408 aaPredicted RBP12.77□□□□□ -0.37
UPF1-205ENST00000598209 PPP1R36Q96LQ0 422 aa12.77□□□□□ -0.37
UPF1-205ENST00000598209 GPR137Q96N19 417 aa12.77□□□□□ -0.37
UPF1-205ENST00000598209 AMDHD1Q96NU7 426 aa12.77□□□□□ -0.37
UPF1-205ENST00000598209 GLIPR2Q9H4G4 154 aa12.77□□□□□ -0.37
UPF1-205ENST00000598209 SH2D2AQ9NP31 389 aa12.77□□□□□ -0.37
UPF1-205ENST00000598209 NPIPA1Q9UND3 350 aa12.77□□□□□ -0.37
UPF1-205ENST00000598209 OSGIN2Q9Y236 505 aa12.77□□□□□ -0.37
UPF1-205ENST00000598209 NPFFR2Q9Y5X5 522 aa12.77□□□□□ -0.37
UPF1-205ENST00000598209 NCKAP5O14513 1909 aa12.76□□□□□ -0.37
UPF1-205ENST00000598209 NUP214P35658 2090 aaPredicted RBP12.76□□□□□ -0.37
UPF1-205ENST00000598209 DOPEY2Q9Y3R5 2298 aa12.76□□□□□ -0.37
UPF1-205ENST00000598209 PINLYPA6NC86 204 aa12.76□□□□□ -0.37
UPF1-205ENST00000598209 CAPN14A8MX76 684 aa12.76□□□□□ -0.37
UPF1-205ENST00000598209 TFECO14948 347 aaPredicted RBP12.76□□□□□ -0.37
UPF1-205ENST00000598209 PDPK1O15530 556 aa12.76□□□□□ -0.37
UPF1-205ENST00000598209 PLOD3O60568 738 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms