RNA–Protein interactions for RNA: ENST00000564519.1

HERC2-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-206ENST00000564519 LIPMQ5VYY2 423 aa11.66□□□□□ -0.54
HERC2-206ENST00000564519 HLA-DQA1Q5Y7H0 255 aa11.66□□□□□ -0.54
HERC2-206ENST00000564519 ACSM2BQ68CK6 577 aa11.66□□□□□ -0.54
HERC2-206ENST00000564519 DESI1Q6ICB0 168 aa11.66□□□□□ -0.54
HERC2-206ENST00000564519 ARHGAP11AQ6P4F7 1023 aa11.66□□□□□ -0.54
HERC2-206ENST00000564519 GALNT18Q6P9A2 607 aa11.66□□□□□ -0.54
HERC2-206ENST00000564519 RGS9BPQ6ZS82 235 aa11.66□□□□□ -0.54
HERC2-206ENST00000564519 TRILQ7L0X0 811 aa11.66□□□□□ -0.54
HERC2-206ENST00000564519 TRABD2AQ86V40 505 aa11.66□□□□□ -0.54
HERC2-206ENST00000564519 CCDC116Q8IYX3 515 aa11.66□□□□□ -0.54
HERC2-206ENST00000564519 VWA5B2Q8N398 1253 aa11.66□□□□□ -0.54
HERC2-206ENST00000564519 FBXW8Q8N3Y1 598 aa11.66□□□□□ -0.54
HERC2-206ENST00000564519 FAM109AQ8N4B1 249 aa11.66□□□□□ -0.54
HERC2-206ENST00000564519 RPRMLQ8N4K4 120 aa11.66□□□□□ -0.54
HERC2-206ENST00000564519 OR52R1Q8NGF1 315 aa11.66□□□□□ -0.54
HERC2-206ENST00000564519 OR9A2Q8NGT5 310 aa11.66□□□□□ -0.54
HERC2-206ENST00000564519 RDH11Q8TC12 318 aa11.66□□□□□ -0.54
HERC2-206ENST00000564519 TP53INP1Q96A56 240 aa11.66□□□□□ -0.54
HERC2-206ENST00000564519 EXOSC8Q96B26 276 aaKnown RBP11.66□□□□□ -0.54
HERC2-206ENST00000564519 CTHRC1Q96CG8 243 aa11.66□□□□□ -0.54
HERC2-206ENST00000564519 GATA5Q9BWX5 397 aaPredicted RBP11.66□□□□□ -0.54
HERC2-206ENST00000564519 ITPAQ9BY32 194 aa11.66□□□□□ -0.54
HERC2-206ENST00000564519 NXF5Q9H1B4 397 aaKnown RBP11.66□□□□□ -0.54
HERC2-206ENST00000564519 BCAP29Q9UHQ4 241 aa11.66□□□□□ -0.54
HERC2-206ENST00000564519 PLLPQ9Y342 182 aa11.66□□□□□ -0.54
HERC2-206ENST00000564519 PTGDR2Q9Y5Y4 395 aa11.66□□□□□ -0.54
HERC2-206ENST00000564519 ABCA12Q86UK0 2595 aa11.66□□□□□ -0.54
HERC2-206ENST00000564519 CCDC151A5D8V7 595 aa11.65□□□□□ -0.54
HERC2-206ENST00000564519 NPIPA2E9PIF3 369 aa11.65□□□□□ -0.54
HERC2-206ENST00000564519 E9PLN8 166 aa11.65□□□□□ -0.54
HERC2-206ENST00000564519 NPIPA3F8WFD2 350 aa11.65□□□□□ -0.54
HERC2-206ENST00000564519 C19orf84I3L1E1 186 aa11.65□□□□□ -0.54
HERC2-206ENST00000564519 CRCPO75575 148 aa11.65□□□□□ -0.54
HERC2-206ENST00000564519 SLU7O95391 586 aaKnown RBP11.65□□□□□ -0.54
HERC2-206ENST00000564519 IGHG3P01860 377 aa11.65□□□□□ -0.54
HERC2-206ENST00000564519 ANXA4P09525 319 aaPredicted RBP11.65□□□□□ -0.54
HERC2-206ENST00000564519 DRD2P14416 443 aa11.65□□□□□ -0.54
HERC2-206ENST00000564519 AGAP20933 346 aa11.65□□□□□ -0.54
HERC2-206ENST00000564519 KCNJ2P63252 427 aa11.65□□□□□ -0.54
HERC2-206ENST00000564519 RPS6KA2Q15349 733 aa11.65□□□□□ -0.54
HERC2-206ENST00000564519 ZNF628Q5EBL2 1059 aa11.65□□□□□ -0.54
HERC2-206ENST00000564519 CFAP157Q5JU67 520 aa11.65□□□□□ -0.54
HERC2-206ENST00000564519 SPDYAQ5MJ70 313 aa11.65□□□□□ -0.54
HERC2-206ENST00000564519 C6orf163Q5TEZ5 329 aa11.65□□□□□ -0.54
HERC2-206ENST00000564519 CLEC6AQ6EIG7 209 aa11.65□□□□□ -0.54
HERC2-206ENST00000564519 TRIM46Q7Z4K8 759 aa11.65□□□□□ -0.54
HERC2-206ENST00000564519 DND1Q8IYX4 353 aaKnown RBP11.65□□□□□ -0.54
HERC2-206ENST00000564519 LRRC25Q8N386 305 aaPredicted RBP11.65□□□□□ -0.54
HERC2-206ENST00000564519 BANPQ8N9N5 519 aa11.65□□□□□ -0.54
HERC2-206ENST00000564519 OR5M9Q8NGP3 310 aa11.65□□□□□ -0.54
HERC2-206ENST00000564519 CDC26Q8NHZ8 85 aa11.65□□□□□ -0.54
HERC2-206ENST00000564519 SPPL2AQ8TCT8 520 aa11.65□□□□□ -0.54
HERC2-206ENST00000564519 PHF10Q8WUB8 498 aaKnown RBP11.65□□□□□ -0.54
HERC2-206ENST00000564519 APOPT1Q96IL0 206 aa11.65□□□□□ -0.54
HERC2-206ENST00000564519 JSRP1Q96MG2 331 aaPredicted RBP11.65□□□□□ -0.54
HERC2-206ENST00000564519 SMC6Q96SB8 1091 aa11.65□□□□□ -0.54
HERC2-206ENST00000564519 VKORC1Q9BQB6 163 aa11.65□□□□□ -0.54
HERC2-206ENST00000564519 ZNF703Q9H7S9 590 aaPredicted RBP11.65□□□□□ -0.54
HERC2-206ENST00000564519 PFDN4Q9NQP4 134 aa11.65□□□□□ -0.54
HERC2-206ENST00000564519 PNPLA3Q9NST1 481 aa11.65□□□□□ -0.54
HERC2-206ENST00000564519 SIRT5Q9NXA8 310 aa11.65□□□□□ -0.54
HERC2-206ENST00000564519 SLC17A7Q9P2U7 560 aa11.65□□□□□ -0.54
HERC2-206ENST00000564519 PSME2Q9UL46 239 aa11.65□□□□□ -0.54
HERC2-206ENST00000564519 CCL27Q9Y4X3 112 aa11.65□□□□□ -0.54
HERC2-206ENST00000564519 POLR3HQ9Y535 204 aaPredicted RBP11.65□□□□□ -0.54
HERC2-206ENST00000564519 NPFFR2Q9Y5X5 522 aa11.65□□□□□ -0.54
HERC2-206ENST00000564519 ZNF780BQ9Y6R6 833 aa11.65□□□□□ -0.54
HERC2-206ENST00000564519 A0A1B0GVC2 190 aa11.64□□□□□ -0.55
HERC2-206ENST00000564519 ZNF500O60304 480 aaPredicted RBP11.64□□□□□ -0.55
HERC2-206ENST00000564519 TRIM3O75382 744 aaPredicted RBP11.64□□□□□ -0.55
HERC2-206ENST00000564519 SPAG7O75391 227 aa11.64□□□□□ -0.55
HERC2-206ENST00000564519 CREB1P16220 341 aa11.64□□□□□ -0.55
HERC2-206ENST00000564519 ENDOUP21128 410 aaKnown RBP11.64□□□□□ -0.55
HERC2-206ENST00000564519 ABCD3P28288 659 aa11.64□□□□□ -0.55
HERC2-206ENST00000564519 ALDH3A1P30838 453 aa11.64□□□□□ -0.55
HERC2-206ENST00000564519 EMDP50402 254 aa11.64□□□□□ -0.55
HERC2-206ENST00000564519 IMPG1Q17R60 797 aa11.64□□□□□ -0.55
HERC2-206ENST00000564519 GXYLT1Q4G148 440 aa11.64□□□□□ -0.55
HERC2-206ENST00000564519 WDR93Q6P2C0 686 aa11.64□□□□□ -0.55
HERC2-206ENST00000564519 PAOXQ6QHF9 649 aa11.64□□□□□ -0.55
HERC2-206ENST00000564519 EID3Q8N140 333 aa11.64□□□□□ -0.55
HERC2-206ENST00000564519 C17orf47Q8NEP4 570 aa11.64□□□□□ -0.55
HERC2-206ENST00000564519 DIO2Q92813 273 aa11.64□□□□□ -0.55
HERC2-206ENST00000564519 KAT2AQ92830 837 aa11.64□□□□□ -0.55
HERC2-206ENST00000564519 FAM111AQ96PZ2 611 aa11.64□□□□□ -0.55
HERC2-206ENST00000564519 DOHHQ9BU89 302 aa11.64□□□□□ -0.55
HERC2-206ENST00000564519 MECRQ9BV79 373 aa11.64□□□□□ -0.55
HERC2-206ENST00000564519 ZFP64Q9NPA5 681 aa11.64□□□□□ -0.55
HERC2-206ENST00000564519 MKS1Q9NXB0 559 aa11.64□□□□□ -0.55
HERC2-206ENST00000564519 EHD3Q9NZN3 535 aa11.64□□□□□ -0.55
HERC2-206ENST00000564519 CNIH4Q9P003 139 aa11.64□□□□□ -0.55
HERC2-206ENST00000564519 SPRR3Q9UBC9 169 aa11.64□□□□□ -0.55
HERC2-206ENST00000564519 LGALS13Q9UHV8 139 aa11.64□□□□□ -0.55
HERC2-206ENST00000564519 EXO1Q9UQ84 846 aaKnown RBP11.64□□□□□ -0.55
HERC2-206ENST00000564519 FIS1Q9Y3D6 152 aa11.64□□□□□ -0.55
HERC2-206ENST00000564519 TRIM13O60858 407 aa11.63□□□□□ -0.55
HERC2-206ENST00000564519 RSL1D1O76021 490 aaKnown RBP11.63□□□□□ -0.55
HERC2-206ENST00000564519 CLDN14O95500 239 aa11.63□□□□□ -0.55
HERC2-206ENST00000564519 CHRNGP07510 517 aa11.63□□□□□ -0.55
HERC2-206ENST00000564519 ABCB1P08183 1280 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms