RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 PARP10Q53GL7 1025 aa2.27□□□□□ -2.05
SCFD1-218ENST00000556256 RNLSQ5VYX0 342 aa2.27□□□□□ -2.05
SCFD1-218ENST00000556256 HIST2H2AA3Q6FI13 130 aa2.27□□□□□ -2.05
SCFD1-218ENST00000556256 STEAP1BQ6NZ63 245 aa2.27□□□□□ -2.05
SCFD1-218ENST00000556256 ADGRD2Q7Z7M1 963 aa2.27□□□□□ -2.05
SCFD1-218ENST00000556256 ELMOD2Q8IZ81 293 aa2.27□□□□□ -2.05
SCFD1-218ENST00000556256 BATF2Q8N1L9 274 aa2.27□□□□□ -2.05
SCFD1-218ENST00000556256 C4orf32Q8N8J7 132 aa2.27□□□□□ -2.05
SCFD1-218ENST00000556256 ZNF491Q8N8L2 437 aa2.27□□□□□ -2.05
SCFD1-218ENST00000556256 COLGALT1Q8NBJ5 622 aa2.27□□□□□ -2.05
SCFD1-218ENST00000556256 RELL2Q8NC24 303 aaPredicted RBP2.27□□□□□ -2.05
SCFD1-218ENST00000556256 RDH11Q8TC12 318 aa2.27□□□□□ -2.05
SCFD1-218ENST00000556256 CCDC47Q96A33 483 aaKnown RBP2.27□□□□□ -2.05
SCFD1-218ENST00000556256 COG3Q96JB2 828 aa2.27□□□□□ -2.05
SCFD1-218ENST00000556256 ACCSQ96QU6 501 aa2.27□□□□□ -2.05
SCFD1-218ENST00000556256 HSD17B14Q9BPX1 270 aa2.27□□□□□ -2.05
SCFD1-218ENST00000556256 CBWD1Q9BRT8 395 aa2.27□□□□□ -2.05
SCFD1-218ENST00000556256 ST6GALNAC5Q9BVH7 336 aa2.27□□□□□ -2.05
SCFD1-218ENST00000556256 DDX47Q9H0S4 455 aaKnown RBP2.27□□□□□ -2.05
SCFD1-218ENST00000556256 ADNPQ9H2P0 1102 aa2.27□□□□□ -2.05
SCFD1-218ENST00000556256 TNMDQ9H2S6 317 aa2.27□□□□□ -2.05
SCFD1-218ENST00000556256 LIME1Q9H400 295 aa2.27□□□□□ -2.05
SCFD1-218ENST00000556256 Q9HAA7 133 aa2.27□□□□□ -2.05
SCFD1-218ENST00000556256 TUBGCP4Q9UGJ1 667 aa2.27□□□□□ -2.05
SCFD1-218ENST00000556256 KIF7Q2M1P5 1343 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 A0A0A6YYD4 124 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 A0A0U1RQG5 324 aaPredicted RBP2.26□□□□□ -2.05
SCFD1-218ENST00000556256 SYCE3A1L190 88 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 RPL37AP8A6NKH3 93 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 TMCO5BA8MYB1 307 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 PDHXO00330 501 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 E2F3O00716 465 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 SH2D1BO14796 132 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 DUSP11O75319 330 aaKnown RBP2.26□□□□□ -2.05
SCFD1-218ENST00000556256 THY1P04216 161 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 HIST1H2AGP0C0S8 130 aaPredicted RBP2.26□□□□□ -2.05
SCFD1-218ENST00000556256 OR9G9P0C7N8 305 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 IL10P22301 178 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 PPP2R1AP30153 589 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 TRIM23P36406 574 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 ACADSBP45954 432 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 SLC6A8P48029 635 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 ZNF131P52739 623 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 NLRP11P59045 1033 aaKnown RBP2.26□□□□□ -2.05
SCFD1-218ENST00000556256 RPS4XP62701 263 aaKnown RBP2.26□□□□□ -2.05
SCFD1-218ENST00000556256 ACY1Q03154 408 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 PDK1Q15118 436 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 ZNF79Q15937 498 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 C17orf58Q2M2W7 97 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 UNC50Q53HI1 259 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 C2orf83Q53S99 150 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 VWA2Q5GFL6 755 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 LINC00242Q5T6M2 205 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 RFWD3Q6PCD5 774 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 FAM159AQ6UWV7 190 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 MIER3Q7Z3K6 550 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 BNIPLQ7Z465 357 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 YRDCQ86U90 279 aaKnown RBP2.26□□□□□ -2.05
SCFD1-218ENST00000556256 CATSPER3Q86XQ3 398 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.26□□□□□ -2.05
SCFD1-218ENST00000556256 LINC00518Q8N0U6 118 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 HDDC3Q8N4P3 179 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 ARL10Q8N8L6 244 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 CCNYQ8ND76 341 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 NEK11Q8NG66 645 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 DQX1Q8TE96 717 aaKnown RBP2.26□□□□□ -2.05
SCFD1-218ENST00000556256 HIST1H2ACQ93077 130 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 MRPL38Q96DV4 380 aaKnown RBP2.26□□□□□ -2.05
SCFD1-218ENST00000556256 COQ7Q99807 217 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 C19orf43Q9BQ61 176 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 FTHL17Q9BXU8 183 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 XPO4Q9C0E2 1151 aaKnown RBP2.26□□□□□ -2.05
SCFD1-218ENST00000556256 ABCG8Q9H221 673 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 HSD3B7Q9H2F3 369 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 NINJ2Q9NZG7 142 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 LHX3Q9UBR4 397 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 ZNF346Q9UL40 294 aaKnown RBP2.26□□□□□ -2.05
SCFD1-218ENST00000556256 CCPG1Q9ULG6 757 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 RAD54L2Q9Y4B4 1467 aa2.26□□□□□ -2.05
SCFD1-218ENST00000556256 UBE4BO95155 1302 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 RPGRIP1LQ68CZ1 1315 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 CFAP73A6NFT4 308 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 FOXI3A8MTJ6 420 aaPredicted RBP2.25□□□□□ -2.05
SCFD1-218ENST00000556256 RNF212BA8MTL3 300 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 HSF2BPO75031 334 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 OAS1P00973 400 aaKnown RBP2.25□□□□□ -2.05
SCFD1-218ENST00000556256 MBL2P11226 248 aaPredicted RBP2.25□□□□□ -2.05
SCFD1-218ENST00000556256 AKT2P31751 481 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 NPY2RP49146 381 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 ATXN3P54252 364 aaPredicted RBP2.25□□□□□ -2.05
SCFD1-218ENST00000556256 FUT7Q11130 342 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 WASHC5Q12768 1159 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 EMC2Q15006 297 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 TRADDQ15628 312 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 CLPPQ16740 277 aaPredicted RBP2.25□□□□□ -2.05
SCFD1-218ENST00000556256 HKDC1Q2TB90 917 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 ANKRD55Q3KP44 614 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 CMPK2Q5EBM0 449 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 DDI2Q5TDH0 399 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 EMBQ6PCB8 327 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms