RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 GRK2P25098 689 aa14.14□□□□□ -0.15
SHMT2-204ENST00000553324 CA7P43166 264 aa14.14□□□□□ -0.15
SHMT2-204ENST00000553324 UGT3A2Q3SY77 523 aa14.14□□□□□ -0.15
SHMT2-204ENST00000553324 TRMT12Q53H54 448 aaKnown RBP14.14□□□□□ -0.15
SHMT2-204ENST00000553324 ZNF628Q5EBL2 1059 aa14.14□□□□□ -0.15
SHMT2-204ENST00000553324 RNFT1Q5M7Z0 435 aa14.14□□□□□ -0.15
SHMT2-204ENST00000553324 FAM180BQ6P0A1 224 aa14.14□□□□□ -0.15
SHMT2-204ENST00000553324 LYPD8Q6UX82 237 aa14.14□□□□□ -0.15
SHMT2-204ENST00000553324 Q6ZPB1 254 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-204ENST00000553324 ZCCHC23Q6ZST2 131 aa14.14□□□□□ -0.15
SHMT2-204ENST00000553324 TICAM1Q8IUC6 712 aa14.14□□□□□ -0.15
SHMT2-204ENST00000553324 FAM9CQ8IZT9 166 aa14.14□□□□□ -0.15
SHMT2-204ENST00000553324 EID3Q8N140 333 aa14.14□□□□□ -0.15
SHMT2-204ENST00000553324 FAM13CQ8NE31 585 aa14.14□□□□□ -0.15
SHMT2-204ENST00000553324 OR52R1Q8NGF1 315 aa14.14□□□□□ -0.15
SHMT2-204ENST00000553324 CDC26Q8NHZ8 85 aa14.14□□□□□ -0.15
SHMT2-204ENST00000553324 TWIST2Q8WVJ9 160 aa14.14□□□□□ -0.15
SHMT2-204ENST00000553324 LCORQ96JN0 433 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-204ENST00000553324 PPP3R2Q96LZ3 170 aa14.14□□□□□ -0.15
SHMT2-204ENST00000553324 TSPAN10Q9H1Z9 355 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-204ENST00000553324 TUBB1Q9H4B7 451 aa14.14□□□□□ -0.15
SHMT2-204ENST00000553324 DEPPQ9NTK1 212 aa14.14□□□□□ -0.15
SHMT2-204ENST00000553324 SUCOQ9UBS9 1254 aaKnown RBP14.14□□□□□ -0.15
SHMT2-204ENST00000553324 ZNF835Q9Y2P0 537 aa14.14□□□□□ -0.15
SHMT2-204ENST00000553324 MYO1GB0I1T2 1018 aa14.13□□□□□ -0.15
SHMT2-204ENST00000553324 PRRG2O14669 202 aa14.13□□□□□ -0.15
SHMT2-204ENST00000553324 LSM1O15116 133 aaKnown RBP14.13□□□□□ -0.15
SHMT2-204ENST00000553324 HS6ST1O60243 411 aa14.13□□□□□ -0.15
SHMT2-204ENST00000553324 PLOD3O60568 738 aa14.13□□□□□ -0.15
SHMT2-204ENST00000553324 SNX4O95219 450 aa14.13□□□□□ -0.15
SHMT2-204ENST00000553324 CBX7O95931 251 aa14.13□□□□□ -0.15
SHMT2-204ENST00000553324 SERPINE1P05121 402 aa14.13□□□□□ -0.15
SHMT2-204ENST00000553324 CCL3P10147 92 aa14.13□□□□□ -0.15
SHMT2-204ENST00000553324 GP1BBP13224 206 aa14.13□□□□□ -0.15
SHMT2-204ENST00000553324 ABOP16442 354 aa14.13□□□□□ -0.15
SHMT2-204ENST00000553324 PCSK2P16519 638 aa14.13□□□□□ -0.15
SHMT2-204ENST00000553324 GPX3P22352 226 aa14.13□□□□□ -0.15
SHMT2-204ENST00000553324 MAPK1P28482 360 aa14.13□□□□□ -0.15
SHMT2-204ENST00000553324 NTSP30990 170 aa14.13□□□□□ -0.15
SHMT2-204ENST00000553324 PPICP45877 212 aa14.13□□□□□ -0.15
SHMT2-204ENST00000553324 ASMTP46597 345 aa14.13□□□□□ -0.15
SHMT2-204ENST00000553324 RPS6KA2Q15349 733 aa14.13□□□□□ -0.15
SHMT2-204ENST00000553324 HYAL4Q2M3T9 481 aa14.13□□□□□ -0.15
SHMT2-204ENST00000553324 RFTN2Q52LD8 501 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-204ENST00000553324 BEND6Q5SZJ8 279 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-204ENST00000553324 C1QL3Q5VWW1 255 aa14.13□□□□□ -0.15
SHMT2-204ENST00000553324 ARHGAP11AQ6P4F7 1023 aa14.13□□□□□ -0.15
SHMT2-204ENST00000553324 FJX1Q86VR8 437 aa14.13□□□□□ -0.15
SHMT2-204ENST00000553324 FBXW8Q8N3Y1 598 aa14.13□□□□□ -0.15
SHMT2-204ENST00000553324 OR10G3Q8NGC4 313 aa14.13□□□□□ -0.15
SHMT2-204ENST00000553324 ZNF764Q96H86 408 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-204ENST00000553324 FCRL1Q96LA6 429 aa14.13□□□□□ -0.15
SHMT2-204ENST00000553324 TAS2R9Q9NYW1 312 aa14.13□□□□□ -0.15
SHMT2-204ENST00000553324 ZDHHC2Q9UIJ5 367 aa14.13□□□□□ -0.15
SHMT2-204ENST00000553324 BOKQ9UMX3 212 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-204ENST00000553324 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-204ENST00000553324 CHCHD2Q9Y6H1 151 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-204ENST00000553324 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.13□□□□□ -0.15
SHMT2-204ENST00000553324 LRRK2Q5S007 2527 aa14.12□□□□□ -0.15
SHMT2-204ENST00000553324 A0A087WV62 115 aa14.12□□□□□ -0.15
SHMT2-204ENST00000553324 CCL21O00585 134 aa14.12□□□□□ -0.15
SHMT2-204ENST00000553324 PIP5K1BO14986 540 aa14.12□□□□□ -0.15
SHMT2-204ENST00000553324 TO15178 435 aa14.12□□□□□ -0.15
SHMT2-204ENST00000553324 GLSO94925 669 aaPredicted RBP14.12□□□□□ -0.15
SHMT2-204ENST00000553324 HSPA4LO95757 839 aa14.12□□□□□ -0.15
SHMT2-204ENST00000553324 ESRRAP11474 423 aaPredicted RBP14.12□□□□□ -0.15
SHMT2-204ENST00000553324 ABCD3P28288 659 aa14.12□□□□□ -0.15
SHMT2-204ENST00000553324 PTGS2P35354 604 aa14.12□□□□□ -0.15
SHMT2-204ENST00000553324 RFC3P40938 356 aa14.12□□□□□ -0.15
SHMT2-204ENST00000553324 EMDP50402 254 aa14.12□□□□□ -0.15
SHMT2-204ENST00000553324 NCBP2P52298 156 aaKnown RBP eCLIP14.12□□□□□ -0.15
SHMT2-204ENST00000553324 KCNJ2P63252 427 aa14.12□□□□□ -0.15
SHMT2-204ENST00000553324 MRPS35P82673 323 aaKnown RBP14.12□□□□□ -0.15
SHMT2-204ENST00000553324 DUSP2Q05923 314 aa14.12□□□□□ -0.15
SHMT2-204ENST00000553324 SLC10A1Q14973 349 aa14.12□□□□□ -0.15
SHMT2-204ENST00000553324 EXOSC7Q15024 291 aaKnown RBP14.12□□□□□ -0.15
SHMT2-204ENST00000553324 LTB4RQ15722 352 aa14.12□□□□□ -0.15
SHMT2-204ENST00000553324 CHI3L2Q15782 390 aa14.12□□□□□ -0.15
SHMT2-204ENST00000553324 ATP6AP1LQ52LC2 224 aa14.12□□□□□ -0.15
SHMT2-204ENST00000553324 CMPK2Q5EBM0 449 aa14.12□□□□□ -0.15
SHMT2-204ENST00000553324 TMEM198Q66K66 360 aa14.12□□□□□ -0.15
SHMT2-204ENST00000553324 NUP54Q7Z3B4 507 aa14.12□□□□□ -0.15
SHMT2-204ENST00000553324 R3HCC1LQ7Z5L2 792 aaKnown RBP14.12□□□□□ -0.15
SHMT2-204ENST00000553324 FAM109AQ8N4B1 249 aa14.12□□□□□ -0.15
SHMT2-204ENST00000553324 OR9A2Q8NGT5 310 aa14.12□□□□□ -0.15
SHMT2-204ENST00000553324 OR2T11Q8NH01 316 aa14.12□□□□□ -0.15
SHMT2-204ENST00000553324 DIO2Q92813 273 aa14.12□□□□□ -0.15
SHMT2-204ENST00000553324 TTTY12Q9BZ98 90 aa14.12□□□□□ -0.15
SHMT2-204ENST00000553324 REEP4Q9H6H4 257 aa14.12□□□□□ -0.15
SHMT2-204ENST00000553324 ZDHHC11Q9H8X9 412 aa14.12□□□□□ -0.15
SHMT2-204ENST00000553324 ZFP64Q9NPA5 681 aa14.12□□□□□ -0.15
SHMT2-204ENST00000553324 PTGDR2Q9Y5Y4 395 aa14.12□□□□□ -0.15
SHMT2-204ENST00000553324 SVILO95425 2214 aa14.12□□□□□ -0.15
SHMT2-204ENST00000553324 WDR91A4D1P6 747 aa14.11□□□□□ -0.15
SHMT2-204ENST00000553324 FRG2CA6NGY1 282 aa14.11□□□□□ -0.15
SHMT2-204ENST00000553324 PLOD2O00469 737 aa14.11□□□□□ -0.15
SHMT2-204ENST00000553324 CDC40O60508 579 aaKnown RBP eCLIP14.11□□□□□ -0.15
SHMT2-204ENST00000553324 TBX19O60806 448 aa14.11□□□□□ -0.15
SHMT2-204ENST00000553324 COQ9O75208 318 aa14.11□□□□□ -0.15
SHMT2-204ENST00000553324 WISP2O76076 250 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms