RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 GOLM1Q8NBJ4 401 aa17.29■□□□□ 0.36
PRPF40B-206ENST00000547764 OR52R1Q8NGF1 315 aa17.29■□□□□ 0.36
PRPF40B-206ENST00000547764 CLHC1Q8NHS4 586 aa17.29■□□□□ 0.36
PRPF40B-206ENST00000547764 KAT2AQ92830 837 aa17.29■□□□□ 0.36
PRPF40B-206ENST00000547764 ANKRA2Q9H9E1 313 aa17.29■□□□□ 0.36
PRPF40B-206ENST00000547764 DEPPQ9NTK1 212 aa17.29■□□□□ 0.36
PRPF40B-206ENST00000547764 ARGLU1Q9NWB6 273 aaPredicted RBP17.29■□□□□ 0.36
PRPF40B-206ENST00000547764 NKIRAS1Q9NYS0 192 aa17.29■□□□□ 0.36
PRPF40B-206ENST00000547764 CFL2Q9Y281 166 aa17.29■□□□□ 0.36
PRPF40B-206ENST00000547764 POLEQ07864 2286 aa17.29■□□□□ 0.36
PRPF40B-206ENST00000547764 ZGRF1Q86YA3 2104 aa17.29■□□□□ 0.36
PRPF40B-206ENST00000547764 CLEC18AA5D8T8 446 aa17.28■□□□□ 0.36
PRPF40B-206ENST00000547764 AKAP10O43572 662 aa17.28■□□□□ 0.36
PRPF40B-206ENST00000547764 LRATO95237 230 aa17.28■□□□□ 0.36
PRPF40B-206ENST00000547764 FBXO45P0C2W1 286 aa17.28■□□□□ 0.36
PRPF40B-206ENST00000547764 RPL14P50914 215 aaKnown RBP17.28■□□□□ 0.36
PRPF40B-206ENST00000547764 NCBP2P52298 156 aaKnown RBP eCLIP17.28■□□□□ 0.36
PRPF40B-206ENST00000547764 PDCD2Q16342 344 aaPredicted RBP17.28■□□□□ 0.36
PRPF40B-206ENST00000547764 RNFT1Q5M7Z0 435 aa17.28■□□□□ 0.36
PRPF40B-206ENST00000547764 C6orf136Q5SQH8 315 aa17.28■□□□□ 0.36
PRPF40B-206ENST00000547764 CLEC18BQ6UXF7 455 aa17.28■□□□□ 0.36
PRPF40B-206ENST00000547764 TMEM64Q6YI46 380 aa17.28■□□□□ 0.36
PRPF40B-206ENST00000547764 HDXQ7Z353 690 aa17.28■□□□□ 0.36
PRPF40B-206ENST00000547764 TAGAPQ8N103 731 aa17.28■□□□□ 0.36
PRPF40B-206ENST00000547764 CLEC18CQ8NCF0 446 aa17.28■□□□□ 0.36
PRPF40B-206ENST00000547764 C17orf47Q8NEP4 570 aa17.28■□□□□ 0.36
PRPF40B-206ENST00000547764 ERP27Q96DN0 273 aa17.28■□□□□ 0.36
PRPF40B-206ENST00000547764 SPACA9Q96E40 222 aaPredicted RBP17.28■□□□□ 0.36
PRPF40B-206ENST00000547764 TSPAN10Q9H1Z9 355 aaPredicted RBP17.28■□□□□ 0.36
PRPF40B-206ENST00000547764 RYDENQ9NUL5 291 aaKnown RBP17.28■□□□□ 0.36
PRPF40B-206ENST00000547764 HAO1Q9UJM8 370 aa17.28■□□□□ 0.36
PRPF40B-206ENST00000547764 G3V3Y1 287 aa17.27■□□□□ 0.36
PRPF40B-206ENST00000547764 BCAS2O75934 225 aaPredicted RBP17.27■□□□□ 0.36
PRPF40B-206ENST00000547764 CCL3P10147 92 aa17.27■□□□□ 0.36
PRPF40B-206ENST00000547764 ZNF24P17028 368 aa17.27■□□□□ 0.36
PRPF40B-206ENST00000547764 MAPK1P28482 360 aa17.27■□□□□ 0.36
PRPF40B-206ENST00000547764 RFC3P40938 356 aa17.27■□□□□ 0.36
PRPF40B-206ENST00000547764 EMDP50402 254 aa17.27■□□□□ 0.36
PRPF40B-206ENST00000547764 KCNK10P57789 538 aa17.27■□□□□ 0.36
PRPF40B-206ENST00000547764 FHL5Q5TD97 284 aa17.27■□□□□ 0.36
PRPF40B-206ENST00000547764 ANKRD26P1Q6NSI1 321 aa17.27■□□□□ 0.36
PRPF40B-206ENST00000547764 SIAH3Q8IW03 269 aa17.27■□□□□ 0.36
PRPF40B-206ENST00000547764 FAM26EQ8N5C1 309 aa17.27■□□□□ 0.36
PRPF40B-206ENST00000547764 POGLUT1Q8NBL1 392 aa17.27■□□□□ 0.36
PRPF40B-206ENST00000547764 OR7G2Q8NG99 324 aa17.27■□□□□ 0.36
PRPF40B-206ENST00000547764 TUBGCP3Q96CW5 907 aa17.27■□□□□ 0.36
PRPF40B-206ENST00000547764 PPP1R36Q96LQ0 422 aa17.27■□□□□ 0.36
PRPF40B-206ENST00000547764 C1orf50Q9BV19 199 aa17.27■□□□□ 0.36
PRPF40B-206ENST00000547764 ITPAQ9BY32 194 aa17.27■□□□□ 0.36
PRPF40B-206ENST00000547764 NXF5Q9H1B4 397 aaKnown RBP17.27■□□□□ 0.36
PRPF40B-206ENST00000547764 GLIPR2Q9H4G4 154 aa17.27■□□□□ 0.36
PRPF40B-206ENST00000547764 REEP4Q9H6H4 257 aa17.27■□□□□ 0.36
PRPF40B-206ENST00000547764 SH2D2AQ9NP31 389 aa17.27■□□□□ 0.36
PRPF40B-206ENST00000547764 SACM1LQ9NTJ5 587 aa17.27■□□□□ 0.36
PRPF40B-206ENST00000547764 SEC14L3Q9UDX4 400 aa17.27■□□□□ 0.36
PRPF40B-206ENST00000547764 PRODH2Q9UF12 536 aa17.27■□□□□ 0.36
PRPF40B-206ENST00000547764 A0A0G2JMM0 328 aa17.26■□□□□ 0.35
PRPF40B-206ENST00000547764 A0A1W2PPB8 328 aa17.26■□□□□ 0.35
PRPF40B-206ENST00000547764 A0A1W2PRS3 328 aa17.26■□□□□ 0.35
PRPF40B-206ENST00000547764 PINLYPA6NC86 204 aa17.26■□□□□ 0.35
PRPF40B-206ENST00000547764 KIR3DP1A8MWS1 328 aa17.26■□□□□ 0.35
PRPF40B-206ENST00000547764 NPIPA5E9PKD4 350 aa17.26■□□□□ 0.35
PRPF40B-206ENST00000547764 PLOD3O60568 738 aa17.26■□□□□ 0.35
PRPF40B-206ENST00000547764 TBX19O60806 448 aa17.26■□□□□ 0.35
PRPF40B-206ENST00000547764 UNC5CO95185 931 aa17.26■□□□□ 0.35
PRPF40B-206ENST00000547764 CNR1P21554 472 aa17.26■□□□□ 0.35
PRPF40B-206ENST00000547764 NTSP30990 170 aa17.26■□□□□ 0.35
PRPF40B-206ENST00000547764 ASMTP46597 345 aa17.26■□□□□ 0.35
PRPF40B-206ENST00000547764 PDE7AQ13946 482 aa17.26■□□□□ 0.35
PRPF40B-206ENST00000547764 UBAP2LQ14157 1087 aaKnown RBP17.26■□□□□ 0.35
PRPF40B-206ENST00000547764 NNATQ16517 81 aa17.26■□□□□ 0.35
PRPF40B-206ENST00000547764 ZNF385BQ569K4 471 aa17.26■□□□□ 0.35
PRPF40B-206ENST00000547764 IL23RQ5VWK5 629 aa17.26■□□□□ 0.35
PRPF40B-206ENST00000547764 SLC22A10Q63ZE4 541 aa17.26■□□□□ 0.35
PRPF40B-206ENST00000547764 GFRALQ6UXV0 394 aa17.26■□□□□ 0.35
PRPF40B-206ENST00000547764 DND1Q8IYX4 353 aaKnown RBP17.26■□□□□ 0.35
PRPF40B-206ENST00000547764 LIX1Q8N485 282 aa17.26■□□□□ 0.35
PRPF40B-206ENST00000547764 FNDC5Q8NAU1 212 aa17.26■□□□□ 0.35
PRPF40B-206ENST00000547764 ZFP62Q8NB50 900 aaPredicted RBP17.26■□□□□ 0.35
PRPF40B-206ENST00000547764 FAM13CQ8NE31 585 aa17.26■□□□□ 0.35
PRPF40B-206ENST00000547764 OR2M7Q8NG81 312 aa17.26■□□□□ 0.35
PRPF40B-206ENST00000547764 PAQR8Q8TEZ7 354 aa17.26■□□□□ 0.35
PRPF40B-206ENST00000547764 PPCDCQ96CD2 204 aa17.26■□□□□ 0.35
PRPF40B-206ENST00000547764 ZNF764Q96H86 408 aaPredicted RBP17.26■□□□□ 0.35
PRPF40B-206ENST00000547764 AMDHD1Q96NU7 426 aa17.26■□□□□ 0.35
PRPF40B-206ENST00000547764 PNPOQ9NVS9 261 aa17.26■□□□□ 0.35
PRPF40B-206ENST00000547764 NPIPA1Q9UND3 350 aa17.26■□□□□ 0.35
PRPF40B-206ENST00000547764 NPFFR2Q9Y5X5 522 aa17.26■□□□□ 0.35
PRPF40B-206ENST00000547764 EML6Q6ZMW3 1958 aa17.26■□□□□ 0.35
PRPF40B-206ENST00000547764 HIVEP3Q5T1R4 2406 aa17.26■□□□□ 0.35
PRPF40B-206ENST00000547764 SEMA7AO75326 666 aa17.25■□□□□ 0.35
PRPF40B-206ENST00000547764 NME6O75414 186 aaPredicted RBP17.25■□□□□ 0.35
PRPF40B-206ENST00000547764 P04436 131 aa17.25■□□□□ 0.35
PRPF40B-206ENST00000547764 NRG3P56975 720 aa17.25■□□□□ 0.35
PRPF40B-206ENST00000547764 NTRK2Q16620 822 aa17.25■□□□□ 0.35
PRPF40B-206ENST00000547764 KRTCAP3Q53RY4 240 aa17.25■□□□□ 0.35
PRPF40B-206ENST00000547764 TTMPQ5BVD1 217 aa17.25■□□□□ 0.35
PRPF40B-206ENST00000547764 FAM47EQ6ZV65 393 aa17.25■□□□□ 0.35
PRPF40B-206ENST00000547764 PRR22Q8IZ63 422 aa17.25■□□□□ 0.35
PRPF40B-206ENST00000547764 KIRREL3Q8IZU9 778 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms