RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 LRRC17Q8N6Y2 441 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 SUMF1Q8NBK3 374 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 OR4Q3Q8NH05 313 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 DQX1Q8TE96 717 aaKnown RBP2.38□□□□□ -2.03
SKP1-203ENST00000517625 AGAP11Q8TF27 550 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 ITLN1Q8WWA0 313 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 BIRC7Q96CA5 298 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 COQ7Q99807 217 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 FAM173AQ9BQD7 235 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 TRIM9Q9C026 710 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 TNMDQ9H2S6 317 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 PCNX3Q9H6A9 2034 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.38□□□□□ -2.031e-6■□□□□ 9.4
SKP1-203ENST00000517625 RAI14Q9P0K7 980 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 LHX3Q9UBR4 397 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 MIOXQ9UGB7 285 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 BCAP29Q9UHQ4 241 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 PURGQ9UJV8 347 aaKnown RBP2.38□□□□□ -2.03
SKP1-203ENST00000517625 ZNF175Q9Y473 711 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 STYXL1Q9Y6J8 313 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 NPIPA2E9PIF3 369 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 PDLIM1O00151 329 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 SEC22BO75396 215 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 CALCAP01258 141 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 H2AFZP0C0S5 128 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 RALAP11233 206 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 GNSP15586 552 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 BCL3P20749 454 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 UCP1P25874 307 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 ASMTP46597 345 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 NPY2RP49146 381 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 PPIAP62937 165 aaKnown RBP2.37□□□□□ -2.03
SKP1-203ENST00000517625 MYBPC1Q00872 1141 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 NAAAQ02083 359 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 COX10Q12887 443 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 BNIP1Q12981 228 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 CYLC2Q14093 348 aaPredicted RBP2.37□□□□□ -2.03
SKP1-203ENST00000517625 SMC1AQ14683 1233 aaKnown RBP2.37□□□□□ -2.03
SKP1-203ENST00000517625 CARTPTQ16568 116 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 CLPPQ16740 277 aaPredicted RBP2.37□□□□□ -2.03
SKP1-203ENST00000517625 ZSWIM7Q19AV6 140 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 MICAQ29983 383 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 ZNF528Q3MIS6 628 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 TOR1AIP1Q5JTV8 583 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 SLC25A30Q5SVS4 291 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 KRTAP5-11Q6L8G4 156 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 ZNF600Q6ZNG1 722 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 PAQR9Q6ZVX9 377 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 BNIPLQ7Z465 357 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 ADAMTSL2Q86TH1 951 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 LUZP1Q86V48 1076 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 ERICH1Q86X53 443 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 HSCBQ8IWL3 235 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 ZNF491Q8N8L2 437 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 CCNYQ8ND76 341 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 OR52E1Q8NGJ3 308 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 TBCKQ8TEA7 893 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 APOL2Q9BQE5 337 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 NDUFAF3Q9BU61 184 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 NMNAT2Q9BZQ4 307 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 CENPMQ9NSP4 180 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 ZNF346Q9UL40 294 aaKnown RBP2.37□□□□□ -2.03
SKP1-203ENST00000517625 RNF24Q9Y225 148 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 RPH3AQ9Y2J0 694 aaPredicted RBP2.37□□□□□ -2.03
SKP1-203ENST00000517625 DHRS7Q9Y394 339 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 ZMYM6O95789 1325 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 KIF7Q2M1P5 1343 aa2.37□□□□□ -2.03
SKP1-203ENST00000517625 TMEM89A2RUT3 159 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 SRRM5B3KS81 715 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 EI24O14681 340 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 ZNF354AO60765 605 aaPredicted RBP2.36□□□□□ -2.03
SKP1-203ENST00000517625 SRSF10O75494 262 aaKnown RBP2.36□□□□□ -2.03
SKP1-203ENST00000517625 PDE5AO76074 875 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 STK17BO94768 372 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 NDUFA7O95182 113 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 ECDO95905 644 aaPredicted RBP2.36□□□□□ -2.03
SKP1-203ENST00000517625 SLC4A1P02730 911 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 ARHGDIAP52565 204 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 VCPP55072 806 aaKnown RBP2.36□□□□□ -2.03
SKP1-203ENST00000517625 NLRP11P59045 1033 aaKnown RBP2.36□□□□□ -2.03
SKP1-203ENST00000517625 HERVK_113P63132 956 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 ERVK-8P63133 956 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 CD226Q15762 336 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 Q1RN00 199 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 PARP6Q2NL67 630 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 AGKQ53H12 422 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 EIPR1Q53HC9 387 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 CMPK2Q5EBM0 449 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 ACER2Q5QJU3 275 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 LEMD1Q68G75 181 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 RAB12Q6IQ22 244 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 ZNF774Q6NX45 483 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 APOOLQ6UXV4 268 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 RBM43Q6ZSC3 357 aaKnown RBP2.36□□□□□ -2.03
SKP1-203ENST00000517625 C1orf186Q6ZWK4 172 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 CEACAM19Q7Z692 300 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 GPBP1Q86WP2 473 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 HIPK1Q86Z02 1210 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 RNF148Q8N7C7 305 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 OR8H1Q8NGG4 311 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms