RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 HS6ST1O60243 411 aa18.32■□□□□ 0.52
SFXN1-209ENST00000508290 GLSO94925 669 aaPredicted RBP18.32■□□□□ 0.52
SFXN1-209ENST00000508290 NTSP30990 170 aa18.32■□□□□ 0.52
SFXN1-209ENST00000508290 KIAA0040Q15053 153 aa18.32■□□□□ 0.52
SFXN1-209ENST00000508290 ZNF628Q5EBL2 1059 aa18.32■□□□□ 0.52
SFXN1-209ENST00000508290 CMPK2Q5EBM0 449 aa18.32■□□□□ 0.52
SFXN1-209ENST00000508290 CEP85LQ5SZL2 805 aa18.32■□□□□ 0.52
SFXN1-209ENST00000508290 MAMDC2Q7Z304 686 aaPredicted RBP18.32■□□□□ 0.52
SFXN1-209ENST00000508290 FJX1Q86VR8 437 aa18.32■□□□□ 0.52
SFXN1-209ENST00000508290 CCDC116Q8IYX3 515 aa18.32■□□□□ 0.52
SFXN1-209ENST00000508290 FAM109AQ8N4B1 249 aa18.32■□□□□ 0.52
SFXN1-209ENST00000508290 FAM13CQ8NE31 585 aa18.32■□□□□ 0.52
SFXN1-209ENST00000508290 PPP1R14CQ8TAE6 165 aa18.32■□□□□ 0.52
SFXN1-209ENST00000508290 EXOSC8Q96B26 276 aaKnown RBP18.32■□□□□ 0.52
SFXN1-209ENST00000508290 LCORQ96JN0 433 aaPredicted RBP18.32■□□□□ 0.52
SFXN1-209ENST00000508290 FCRL1Q96LA6 429 aa18.32■□□□□ 0.52
SFXN1-209ENST00000508290 BBS4Q96RK4 519 aa18.32■□□□□ 0.52
SFXN1-209ENST00000508290 MECRQ9BV79 373 aa18.32■□□□□ 0.52
SFXN1-209ENST00000508290 TTTY12Q9BZ98 90 aa18.32■□□□□ 0.52
SFXN1-209ENST00000508290 ZDHHC11Q9H8X9 412 aa18.32■□□□□ 0.52
SFXN1-209ENST00000508290 TNFRSF12AQ9NP84 129 aa18.32■□□□□ 0.52
SFXN1-209ENST00000508290 QPCTLQ9NXS2 382 aa18.32■□□□□ 0.52
SFXN1-209ENST00000508290 PLEKHB1Q9UF11 243 aaPredicted RBP18.32■□□□□ 0.52
SFXN1-209ENST00000508290 POLR3HQ9Y535 204 aaPredicted RBP18.32■□□□□ 0.52
SFXN1-209ENST00000508290 CHCHD2Q9Y6H1 151 aaPredicted RBP18.32■□□□□ 0.52
SFXN1-209ENST00000508290 CCL21O00585 134 aa18.31■□□□□ 0.52
SFXN1-209ENST00000508290 PLOD3O60568 738 aa18.31■□□□□ 0.52
SFXN1-209ENST00000508290 COQ9O75208 318 aa18.31■□□□□ 0.52
SFXN1-209ENST00000508290 SNX4O95219 450 aa18.31■□□□□ 0.52
SFXN1-209ENST00000508290 ZWINTO95229 277 aa18.31■□□□□ 0.52
SFXN1-209ENST00000508290 CCL3P10147 92 aa18.31■□□□□ 0.52
SFXN1-209ENST00000508290 DRD5P21918 477 aa18.31■□□□□ 0.52
SFXN1-209ENST00000508290 MAPK1P28482 360 aa18.31■□□□□ 0.52
SFXN1-209ENST00000508290 PPICP45877 212 aa18.31■□□□□ 0.52
SFXN1-209ENST00000508290 ASMTP46597 345 aa18.31■□□□□ 0.52
SFXN1-209ENST00000508290 KCNJ2P63252 427 aa18.31■□□□□ 0.52
SFXN1-209ENST00000508290 TNFAIP8L3Q5GJ75 292 aa18.31■□□□□ 0.52
SFXN1-209ENST00000508290 SH2D4BQ5SQS7 431 aa18.31■□□□□ 0.52
SFXN1-209ENST00000508290 TICAM1Q8IUC6 712 aa18.31■□□□□ 0.52
SFXN1-209ENST00000508290 NUDCD3Q8IVD9 361 aa18.31■□□□□ 0.52
SFXN1-209ENST00000508290 OR6Y1Q8NGX8 325 aa18.31■□□□□ 0.52
SFXN1-209ENST00000508290 TWIST2Q8WVJ9 160 aa18.31■□□□□ 0.52
SFXN1-209ENST00000508290 PPP3R2Q96LZ3 170 aa18.31■□□□□ 0.52
SFXN1-209ENST00000508290 TAS2R9Q9NYW1 312 aa18.31■□□□□ 0.52
SFXN1-209ENST00000508290 B4GALT7Q9UBV7 327 aa18.31■□□□□ 0.52
SFXN1-209ENST00000508290 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.31■□□□□ 0.52
SFXN1-209ENST00000508290 SPTAN1Q13813 2472 aaKnown RBP18.31■□□□□ 0.52
SFXN1-209ENST00000508290 DOPEY2Q9Y3R5 2298 aa18.3■□□□□ 0.52
SFXN1-209ENST00000508290 A0A087WV62 115 aa18.3■□□□□ 0.52
SFXN1-209ENST00000508290 OR14I1A6ND48 311 aa18.3■□□□□ 0.52
SFXN1-209ENST00000508290 MYO1GB0I1T2 1018 aa18.3■□□□□ 0.52
SFXN1-209ENST00000508290 TMEM114B3SHH9 223 aa18.3■□□□□ 0.52
SFXN1-209ENST00000508290 TO15178 435 aa18.3■□□□□ 0.52
SFXN1-209ENST00000508290 TBX19O60806 448 aa18.3■□□□□ 0.52
SFXN1-209ENST00000508290 CBX7O95931 251 aa18.3■□□□□ 0.52
SFXN1-209ENST00000508290 CHRNGP07510 517 aa18.3■□□□□ 0.52
SFXN1-209ENST00000508290 ESRRAP11474 423 aaPredicted RBP18.3■□□□□ 0.52
SFXN1-209ENST00000508290 ABCD3P28288 659 aa18.3■□□□□ 0.52
SFXN1-209ENST00000508290 PTGS2P35354 604 aa18.3■□□□□ 0.52
SFXN1-209ENST00000508290 RPL3P39023 403 aaKnown RBP18.3■□□□□ 0.52
SFXN1-209ENST00000508290 SERPINB4P48594 390 aa18.3■□□□□ 0.52
SFXN1-209ENST00000508290 FOXO1Q12778 655 aa18.3■□□□□ 0.52
SFXN1-209ENST00000508290 TMEM81Q6P7N7 255 aa18.3■□□□□ 0.52
SFXN1-209ENST00000508290 FAM111BQ6SJ93 734 aa18.3■□□□□ 0.52
SFXN1-209ENST00000508290 Q6ZSR9 355 aa18.3■□□□□ 0.52
SFXN1-209ENST00000508290 EXOC3L1Q86VI1 746 aa18.3■□□□□ 0.52
SFXN1-209ENST00000508290 DDIASQ8IXT1 998 aa18.3■□□□□ 0.52
SFXN1-209ENST00000508290 ADCY4Q8NFM4 1077 aa18.3■□□□□ 0.52
SFXN1-209ENST00000508290 OR10G3Q8NGC4 313 aa18.3■□□□□ 0.52
SFXN1-209ENST00000508290 OR52R1Q8NGF1 315 aa18.3■□□□□ 0.52
SFXN1-209ENST00000508290 CDC26Q8NHZ8 85 aa18.3■□□□□ 0.52
SFXN1-209ENST00000508290 DOK4Q8TEW6 326 aa18.3■□□□□ 0.52
SFXN1-209ENST00000508290 MTERF3Q96E29 417 aa18.3■□□□□ 0.52
SFXN1-209ENST00000508290 ZIM3Q96PE6 472 aa18.3■□□□□ 0.52
SFXN1-209ENST00000508290 CENPHQ9H3R5 247 aa18.3■□□□□ 0.52
SFXN1-209ENST00000508290 ZFP64Q9NPA5 681 aa18.3■□□□□ 0.52
SFXN1-209ENST00000508290 FIS1Q9Y3D6 152 aa18.3■□□□□ 0.52
SFXN1-209ENST00000508290 FRG2CA6NGY1 282 aa18.29■□□□□ 0.52
SFXN1-209ENST00000508290 LSM1O15116 133 aaKnown RBP18.29■□□□□ 0.52
SFXN1-209ENST00000508290 ABCB7O75027 752 aa18.29■□□□□ 0.52
SFXN1-209ENST00000508290 IGHG3P01860 377 aa18.29■□□□□ 0.52
SFXN1-209ENST00000508290 CREB1P16220 341 aa18.29■□□□□ 0.52
SFXN1-209ENST00000508290 PCSK2P16519 638 aa18.29■□□□□ 0.52
SFXN1-209ENST00000508290 AGAP20933 346 aa18.29■□□□□ 0.52
SFXN1-209ENST00000508290 GRK2P25098 689 aa18.29■□□□□ 0.52
SFXN1-209ENST00000508290 RFC3P40938 356 aa18.29■□□□□ 0.52
SFXN1-209ENST00000508290 EMDP50402 254 aa18.29■□□□□ 0.52
SFXN1-209ENST00000508290 SMSP52788 366 aa18.29■□□□□ 0.52
SFXN1-209ENST00000508290 UGT3A2Q3SY77 523 aa18.29■□□□□ 0.52
SFXN1-209ENST00000508290 TRMT12Q53H54 448 aaKnown RBP18.29■□□□□ 0.52
SFXN1-209ENST00000508290 FAM219BQ5XKK7 198 aa18.29■□□□□ 0.52
SFXN1-209ENST00000508290 NUP54Q7Z3B4 507 aa18.29■□□□□ 0.52
SFXN1-209ENST00000508290 OR9A2Q8NGT5 310 aa18.29■□□□□ 0.52
SFXN1-209ENST00000508290 PHF10Q8WUB8 498 aaKnown RBP18.29■□□□□ 0.52
SFXN1-209ENST00000508290 DIO2Q92813 273 aa18.29■□□□□ 0.52
SFXN1-209ENST00000508290 BTBD9Q96Q07 612 aa18.29■□□□□ 0.52
SFXN1-209ENST00000508290 DOHHQ9BU89 302 aa18.29■□□□□ 0.52
SFXN1-209ENST00000508290 NXF5Q9H1B4 397 aaKnown RBP18.29■□□□□ 0.52
SFXN1-209ENST00000508290 TUBB1Q9H4B7 451 aa18.29■□□□□ 0.52
SFXN1-209ENST00000508290 CNOT11Q9UKZ1 510 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms