RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 UPK1BO75841 260 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 TSPAN12O95859 305 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 ENO1P06733 434 aaKnown RBP10.99□□□□□ -0.65
BRCA1-222ENST00000493919 APRTP07741 180 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 NUDT7P0C024 238 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 PRR35P0CG20 571 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 RRASP10301 218 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 FOXN2P32314 431 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 RPL22P35268 128 aaKnown RBP10.99□□□□□ -0.65
BRCA1-222ENST00000493919 THBS2P35442 1172 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 COILP38432 576 aaPredicted RBP10.99□□□□□ -0.65
BRCA1-222ENST00000493919 MAP2K6P52564 334 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 STC1P52823 247 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 OR2B6P58173 313 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 GAGE1Q13065 139 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 UAP1L1Q3KQV9 507 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 CHRFAM7AQ494W8 412 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 RFLNAQ6ZTI6 216 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 ABI3BPQ7Z7G0 1075 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 CCDC71Q8IV32 467 aaPredicted RBP10.99□□□□□ -0.65
BRCA1-222ENST00000493919 TCTE3Q8IZS6 198 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 MINDY1Q8N5J2 469 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 MEIOBQ8N635 442 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 LRRC17Q8N6Y2 441 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 PLA2G15Q8NCC3 412 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 OR5M1Q8NGP8 315 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 RIT1Q92963 219 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 BMFQ96LC9 184 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 COQ10AQ96MF6 247 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 LYSMD1Q96S90 227 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 FMO2Q99518 471 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 OSBPL11Q9BXB4 747 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 REXO4Q9GZR2 422 aaKnown RBP10.99□□□□□ -0.65
BRCA1-222ENST00000493919 CTPS2Q9NRF8 586 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 MCUBQ9NWR8 336 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 RPH3ALQ9UNE2 315 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 PSMD13Q9UNM6 376 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 OR1A2Q9Y585 309 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 DNMT3AQ9Y6K1 912 aaPredicted RBP10.99□□□□□ -0.65
BRCA1-222ENST00000493919 KNL1Q8NG31 2342 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 DCHS1Q96JQ0 3298 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 G3V2T6 193 aa10.98□□□□□ -0.65
BRCA1-222ENST00000493919 K7ESM1 405 aa10.98□□□□□ -0.65
BRCA1-222ENST00000493919 SULT1C2O00338 296 aa10.98□□□□□ -0.65
BRCA1-222ENST00000493919 AP2A1O95782 977 aa10.98□□□□□ -0.65
BRCA1-222ENST00000493919 ZNF182P17025 639 aaPredicted RBP10.98□□□□□ -0.65
BRCA1-222ENST00000493919 MATN1P21941 496 aa10.98□□□□□ -0.65
BRCA1-222ENST00000493919 MAPK1P28482 360 aa10.98□□□□□ -0.65
BRCA1-222ENST00000493919 ADRA1AP35348 466 aa10.98□□□□□ -0.65
BRCA1-222ENST00000493919 PTSQ03393 145 aa10.98□□□□□ -0.65
BRCA1-222ENST00000493919 HNF4GQ14541 408 aa10.98□□□□□ -0.65
BRCA1-222ENST00000493919 GPR68Q15743 365 aa10.98□□□□□ -0.65
BRCA1-222ENST00000493919 GRK1Q15835 563 aa10.98□□□□□ -0.65
BRCA1-222ENST00000493919 CYP1B1Q16678 543 aa10.98□□□□□ -0.65
BRCA1-222ENST00000493919 SYT16Q17RD7 645 aa10.98□□□□□ -0.65
BRCA1-222ENST00000493919 PRAMEF14Q5SWL7 426 aa10.98□□□□□ -0.65
BRCA1-222ENST00000493919 Q6ZSR6 202 aa10.98□□□□□ -0.65
BRCA1-222ENST00000493919 ZC3H7AQ8IWR0 971 aaKnown RBP10.98□□□□□ -0.65
BRCA1-222ENST00000493919 SLC22A18ASQ8N1D0 253 aa10.98□□□□□ -0.65
BRCA1-222ENST00000493919 NANOGP1Q8N7R0 232 aa10.98□□□□□ -0.65
BRCA1-222ENST00000493919 KBTBD8Q8NFY9 601 aa10.98□□□□□ -0.65
BRCA1-222ENST00000493919 BBS10Q8TAM1 723 aa10.98□□□□□ -0.65
BRCA1-222ENST00000493919 SCAMP4Q969E2 229 aa10.98□□□□□ -0.65
BRCA1-222ENST00000493919 RNF145Q96MT1 663 aa10.98□□□□□ -0.65
BRCA1-222ENST00000493919 SEMA6AQ9H2E6 1030 aa10.98□□□□□ -0.65
BRCA1-222ENST00000493919 ANKRD19PQ9H560 264 aa10.98□□□□□ -0.65
BRCA1-222ENST00000493919 TMEM9BQ9NQ34 198 aa10.98□□□□□ -0.65
BRCA1-222ENST00000493919 ABCG2Q9UNQ0 655 aa10.98□□□□□ -0.65
BRCA1-222ENST00000493919 MYLKQ15746 1914 aa10.98□□□□□ -0.65
BRCA1-222ENST00000493919 M0QZK8 103 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 SLC30A4O14863 429 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 PRKYO43930 277 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 UGT2B17O75795 530 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 GATBO75879 557 aaKnown RBP10.97□□□□□ -0.65
BRCA1-222ENST00000493919 CER1O95813 267 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 HOXC4P09017 264 aaPredicted RBP10.97□□□□□ -0.65
BRCA1-222ENST00000493919 JUNBP17275 347 aaPredicted RBP10.97□□□□□ -0.65
BRCA1-222ENST00000493919 ACVR2AP27037 513 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 MPIP34949 423 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 RABIFP47224 123 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 SLC1A6P48664 564 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 UGT2B15P54855 530 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 CDH13P55290 713 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 NXPH1P58417 271 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 DEFA1P59665 94 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 DEFA3P59666 94 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 DCAF7P61962 342 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 RPS26P62854 115 aaKnown RBP10.97□□□□□ -0.65
BRCA1-222ENST00000493919 SRSF11Q05519 484 aaKnown RBP10.97□□□□□ -0.65
BRCA1-222ENST00000493919 FGL1Q08830 312 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 OVGP1Q12889 678 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 GPS1Q13098 491 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 SEMA5AQ13591 1074 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 BAK1Q16611 211 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 HLA-BQ31612 363 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 RFX4Q33E94 735 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 GXYLT1Q4G148 440 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 ARHGAP40Q5TG30 622 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 FAM92BQ6ZTR7 304 aa10.97□□□□□ -0.65
BRCA1-222ENST00000493919 PAGE2Q7Z2X7 111 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms