RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 GRB7Q14451 532 aa8.17□□□□□ -1.1
CD47-204ENST00000471694 PAFAH1B3Q15102 231 aaKnown RBP8.17□□□□□ -1.1
CD47-204ENST00000471694 C9orf50Q5SZB4 431 aa8.17□□□□□ -1.1
CD47-204ENST00000471694 GPR153Q6NV75 609 aa8.17□□□□□ -1.1
CD47-204ENST00000471694 TRABD2AQ86V40 505 aa8.17□□□□□ -1.1
CD47-204ENST00000471694 TMEM9Q9P0T7 183 aa8.17□□□□□ -1.1
CD47-204ENST00000471694 HCSTQ9UBK5 93 aa8.17□□□□□ -1.1
CD47-204ENST00000471694 CLEC4EQ9ULY5 219 aa8.17□□□□□ -1.1
CD47-204ENST00000471694 FAM166BA8MTA8 275 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 DIRAS3O95661 229 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 GALNT2Q10471 571 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 OR5M10Q6IEU7 315 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 CA5BP1Q8WTZ4 195 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 TMEM40Q8WWA1 233 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 OR14J1Q9UGF5 321 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 AP1G1O43747 822 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 ATG12O94817 140 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 IL2RAP01589 272 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 CERS1P27544 350 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 HOXC13P31276 330 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 CYB561P49447 251 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 DAP3P51398 398 aaKnown RBP8.16□□□□□ -1.1
CD47-204ENST00000471694 GDF10P55107 478 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 FUT2Q10981 343 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 KLF10Q13118 480 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 C19orf47Q8N9M1 422 aaKnown RBP8.16□□□□□ -1.1
CD47-204ENST00000471694 CPEB3Q8NE35 698 aaKnown RBP8.16□□□□□ -1.1
CD47-204ENST00000471694 OR2L2Q8NH16 312 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 SCGB1C1Q8TD33 95 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 ST14Q9Y5Y6 855 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 PSMG1O95456 288 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 GABRR1P24046 479 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 GSTM2P28161 218 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 COL9A3Q14050 684 aaPredicted RBP8.16□□□□□ -1.1
CD47-204ENST00000471694 LTC4SQ16873 150 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 C15orf39Q6ZRI6 1047 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 HTR3DQ70Z44 454 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 AQP11Q8NBQ7 271 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 COG8Q96MW5 612 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 RHBDL2Q9NX52 303 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 GFRA2O00451 464 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 LRRTM2O43300 516 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 ANXA3P12429 323 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 SLC6A8P48029 635 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 C1orf210Q8IVY1 113 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 OR51Q1Q8NH59 317 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 ZNF566Q969W8 418 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 ZBP1Q9H171 429 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 CCDC86Q9H6F5 360 aaKnown RBP8.16□□□□□ -1.1
CD47-204ENST00000471694 TRIM36Q9NQ86 728 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 POLE4Q9NR33 117 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 FAM120CQ9NX05 1096 aaKnown RBP8.16□□□□□ -1.1
CD47-204ENST00000471694 RHCGQ9UBD6 479 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 NID2Q14112 1375 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 DPM1O60762 260 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 DRD2P14416 443 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 NR4A1P22736 598 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 ZNF252P-AS1Q0IIN9 211 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 OLIG2Q13516 323 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 SLC22A25Q6T423 547 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 DCDC5Q6ZRR9 648 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 PARS2Q7L3T8 475 aaKnown RBP8.16□□□□□ -1.1
CD47-204ENST00000471694 ZNF619Q8N2I2 560 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 CCDC107Q8WV48 283 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 TMEM168Q9H0V1 697 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 STOX2Q9P2F5 926 aaPredicted RBP8.16□□□□□ -1.1
CD47-204ENST00000471694 KLHL21Q9UJP4 597 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 C4BP0C0L5 1744 aa8.16□□□□□ -1.1
CD47-204ENST00000471694 FAM90A27PA6NNH2 459 aa8.15□□□□□ -1.1
CD47-204ENST00000471694 MEIS3P2A8K0S8 358 aa8.15□□□□□ -1.1
CD47-204ENST00000471694 SLC43A1O75387 559 aa8.15□□□□□ -1.1
CD47-204ENST00000471694 HTR3BO95264 441 aa8.15□□□□□ -1.1
CD47-204ENST00000471694 TMEM225BP0DP42 221 aa8.15□□□□□ -1.1
CD47-204ENST00000471694 ACVR1BP36896 505 aa8.15□□□□□ -1.1
CD47-204ENST00000471694 ZNF829Q3KNS6 432 aaPredicted RBP8.15□□□□□ -1.1
CD47-204ENST00000471694 DPPA4Q7L190 304 aa8.15□□□□□ -1.1
CD47-204ENST00000471694 EXD3Q8N9H8 876 aa8.15□□□□□ -1.1
CD47-204ENST00000471694 PHF12Q96QT6 1004 aa8.15□□□□□ -1.1
CD47-204ENST00000471694 MNTQ99583 582 aa8.15□□□□□ -1.1
CD47-204ENST00000471694 PLEKHA3Q9HB20 300 aa8.15□□□□□ -1.1
CD47-204ENST00000471694 CBX7O95931 251 aa8.15□□□□□ -1.1
CD47-204ENST00000471694 PLCXD3Q63HM9 321 aa8.15□□□□□ -1.1
CD47-204ENST00000471694 GLT8D1Q68CQ7 371 aa8.15□□□□□ -1.1
CD47-204ENST00000471694 NIPA2Q8N8Q9 360 aa8.15□□□□□ -1.1
CD47-204ENST00000471694 KLF16Q9BXK1 252 aaPredicted RBP8.15□□□□□ -1.1
CD47-204ENST00000471694 EGLN1Q9GZT9 426 aa8.15□□□□□ -1.1
CD47-204ENST00000471694 PELI2Q9HAT8 420 aa8.15□□□□□ -1.1
CD47-204ENST00000471694 FOLH1BQ9HBA9 442 aa8.15□□□□□ -1.1
CD47-204ENST00000471694 ZSCAN5BA6NJL1 495 aa8.15□□□□□ -1.1
CD47-204ENST00000471694 DISC1C4P0D8 188 aa8.15□□□□□ -1.1
CD47-204ENST00000471694 BPIP17213 487 aa8.15□□□□□ -1.1
CD47-204ENST00000471694 IRS1P35568 1242 aa8.15□□□□□ -1.1
CD47-204ENST00000471694 TMEM184AQ6ZMB5 413 aa8.15□□□□□ -1.1
CD47-204ENST00000471694 METTL25Q8N6Q8 603 aa8.15□□□□□ -1.1
CD47-204ENST00000471694 NPY6RQ99463 290 aa8.15□□□□□ -1.1
CD47-204ENST00000471694 OSBPL11Q9BXB4 747 aa8.15□□□□□ -1.1
CD47-204ENST00000471694 MALT1Q9UDY8 824 aa8.15□□□□□ -1.1
CD47-204ENST00000471694 OR5K3A6NET4 321 aa8.15□□□□□ -1.1
CD47-204ENST00000471694 LDB3O75112 727 aa8.15□□□□□ -1.1
CD47-204ENST00000471694 CHRM4P08173 479 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms