RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 SUMO4Q6EEV6 95 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 OR2A2Q6IF42 318 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 PLEKHA7Q6IQ23 1121 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 CAPN13Q6MZZ7 669 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 RHBDD2Q6NTF9 364 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 VWA1Q6PCB0 445 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 RFWD3Q6PCD5 774 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 KCNIP4Q6PIL6 250 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 ZNF782Q6ZMW2 699 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 DPY19L3Q6ZPD9 716 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 SLC35D2Q76EJ3 337 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 SLC26A9Q7LBE3 791 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 ARCQ7LC44 396 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 FAM122BQ7Z309 247 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 TMPRSS11BQ86T26 416 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 PATL1Q86TB9 770 aaKnown RBP3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 CCDC50Q8IVM0 306 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 ALLCQ8N6M5 410 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 TMEM217Q8N7C4 229 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 PNPLA1Q8N8W4 532 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 FBXL13Q8NEE6 735 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 OR4D6Q8NGJ1 314 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 OR1L4Q8NGR5 311 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 TEX47Q8TBZ9 253 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 HM13Q8TCT9 377 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 SLC44A1Q8WWI5 657 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 HTR3CQ8WXA8 447 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 DNAAF4Q8WXU2 420 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 CCDC127Q96BQ5 260 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 ZC3HAV1LQ96H79 300 aaKnown RBP3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 IGSF21Q96ID5 467 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 CPB2Q96IY4 423 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 AKR1E2Q96JD6 320 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 SLC22A12Q96S37 553 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 GFI1Q99684 422 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 OMDQ99983 421 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 SLC2A11Q9BYW1 496 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 TM6SF1Q9BZW5 370 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 POLR3FQ9H1D9 316 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 OR51V1Q9H2C8 321 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 KCNN2Q9H2S1 579 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 SAV1Q9H4B6 383 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 DHX33Q9H6R0 707 aaKnown RBP3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 ATP13A3Q9H7F0 1226 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 ACTR5Q9H9F9 607 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 UBTD1Q9HAC8 227 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 MCCC2Q9HCC0 563 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 RAVER2Q9HCJ3 691 aaKnown RBP3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 TXNRD2Q9NNW7 524 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 PXMP2Q9NR77 195 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 UFSP2Q9NUQ7 469 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 ACOXLQ9NUZ1 547 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 APOBEC3BQ9UH17 382 aaKnown RBP3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 LCMT1Q9UIC8 334 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 FBXO4Q9UKT5 387 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 EXOGQ9Y2C4 368 aaKnown RBP3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 SAMHD1Q9Y3Z3 626 aaKnown RBP3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 PPIAL4EA0A075B759 164 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 BCLAF3A2AJT9 711 aaKnown RBP3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 TMEM247A6NEH6 219 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 MGAT4DA6NG13 374 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 LINC01548A6NM66 108 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 I6L893 689 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 TRAFD1O14545 582 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 PRYO14603 147 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 KCNN4O15554 427 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 ATP6AP2O75787 350 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 RPP14O95059 124 aaKnown RBP3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 PIGRP01833 764 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 CD3GP09693 182 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 RFPL3SP0C7P2 107 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 ELFN1P0C7U0 828 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 SP9P0CG40 484 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 PPIAL4FP0DN26 164 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 CETPP11597 493 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 ETS2P15036 469 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 GIFP27352 417 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 NDUFS1P28331 727 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 LAP3P28838 519 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 GNA11P29992 359 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 YWHABP31946 246 aaKnown RBP3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 GKP32189 559 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 CCKBRP32239 447 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 CDKN2CP42773 168 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 ACADSBP45954 432 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 PCYT1AP49585 367 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 RAD23BP54727 409 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 CLDN15P56746 228 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 ACTBP60709 375 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 ACTA2P62736 377 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 ACTG1P63261 375 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 ACTG2P63267 376 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 ACTC1P68032 377 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 ACTA1P68133 377 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 TXNL4AP83876 142 aaKnown RBP3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 FPGSQ05932 587 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 NFATC2Q13469 925 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 HLXQ14774 488 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 TAF13Q15543 124 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 ALX1Q15699 326 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms