RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 KLF7O75840 302 aaPredicted RBP13.54□□□□□ -0.24
LINC00339-208ENST00000634934 IL6P05231 212 aa13.54□□□□□ -0.24
LINC00339-208ENST00000634934 EFNA1P20827 205 aaPredicted RBP13.54□□□□□ -0.24
LINC00339-208ENST00000634934 NTSP30990 170 aa13.54□□□□□ -0.24
LINC00339-208ENST00000634934 PEX19P40855 299 aa13.54□□□□□ -0.24
LINC00339-208ENST00000634934 KIR3DL1P43629 444 aa13.54□□□□□ -0.24
LINC00339-208ENST00000634934 RPS18P62269 152 aaKnown RBP13.54□□□□□ -0.24
LINC00339-208ENST00000634934 RHAGQ02094 409 aa13.54□□□□□ -0.24
LINC00339-208ENST00000634934 NSDHLQ15738 373 aa13.54□□□□□ -0.24
LINC00339-208ENST00000634934 DPY19L1Q2PZI1 675 aa13.54□□□□□ -0.24
LINC00339-208ENST00000634934 CNPY1Q3B7I2 92 aa13.54□□□□□ -0.24
LINC00339-208ENST00000634934 TIGD2Q4W5G0 525 aa13.54□□□□□ -0.24
LINC00339-208ENST00000634934 LPCAT4Q643R3 524 aa13.54□□□□□ -0.24
LINC00339-208ENST00000634934 OR4F3Q6IEY1 312 aa13.54□□□□□ -0.24
LINC00339-208ENST00000634934 BLOC1S3Q6QNY0 202 aa13.54□□□□□ -0.24
LINC00339-208ENST00000634934 MED25Q71SY5 747 aa13.54□□□□□ -0.24
LINC00339-208ENST00000634934 TMEM102Q8N9M5 508 aaPredicted RBP13.54□□□□□ -0.24
LINC00339-208ENST00000634934 OR2Y1Q8NGV0 311 aa13.54□□□□□ -0.24
LINC00339-208ENST00000634934 KIAA1143Q96AT1 154 aaPredicted RBP13.54□□□□□ -0.24
LINC00339-208ENST00000634934 VPS33AQ96AX1 596 aa13.54□□□□□ -0.24
LINC00339-208ENST00000634934 COQ8BQ96D53 544 aa13.54□□□□□ -0.24
LINC00339-208ENST00000634934 CNRIP1Q96F85 164 aaPredicted RBP13.54□□□□□ -0.24
LINC00339-208ENST00000634934 ALOXE3Q9BYJ1 711 aa13.54□□□□□ -0.24
LINC00339-208ENST00000634934 MRPS26Q9BYN8 205 aaKnown RBP13.54□□□□□ -0.24
LINC00339-208ENST00000634934 TRIM4Q9C037 500 aa13.54□□□□□ -0.24
LINC00339-208ENST00000634934 NECTIN3Q9NQS3 549 aa13.54□□□□□ -0.24
LINC00339-208ENST00000634934 TAS2R7Q9NYW3 318 aa13.54□□□□□ -0.24
LINC00339-208ENST00000634934 RAXQ9Y2V3 346 aa13.54□□□□□ -0.24
LINC00339-208ENST00000634934 SCN2AQ99250 2005 aa13.53□□□□□ -0.24
LINC00339-208ENST00000634934 C15orf38-AP3S2A0A0A6YYH1 394 aa13.53□□□□□ -0.24
LINC00339-208ENST00000634934 TCRBV3S1A0A5B6 114 aa13.53□□□□□ -0.24
LINC00339-208ENST00000634934 ANKRD33BA6NCL7 494 aa13.53□□□□□ -0.24
LINC00339-208ENST00000634934 CCDC154A6NI56 674 aa13.53□□□□□ -0.24
LINC00339-208ENST00000634934 TGFBR3LH3BV60 316 aa13.53□□□□□ -0.24
LINC00339-208ENST00000634934 RECKO95980 971 aa13.53□□□□□ -0.24
LINC00339-208ENST00000634934 IFNA16P05015 189 aa13.53□□□□□ -0.24
LINC00339-208ENST00000634934 PGRP06401 933 aa13.53□□□□□ -0.24
LINC00339-208ENST00000634934 CPMP14384 443 aa13.53□□□□□ -0.24
LINC00339-208ENST00000634934 CSNK2A2P19784 350 aaPredicted RBP13.53□□□□□ -0.24
LINC00339-208ENST00000634934 F8A1P23610 371 aa13.53□□□□□ -0.24
LINC00339-208ENST00000634934 GSTT1P30711 240 aa13.53□□□□□ -0.24
LINC00339-208ENST00000634934 ZFP36L2P47974 494 aaKnown RBP13.53□□□□□ -0.24
LINC00339-208ENST00000634934 EFNA3P52797 238 aa13.53□□□□□ -0.24
LINC00339-208ENST00000634934 PCBP4P57723 403 aaKnown RBP13.53□□□□□ -0.24
LINC00339-208ENST00000634934 RHDQ02161 417 aa13.53□□□□□ -0.24
LINC00339-208ENST00000634934 VPS26BQ4G0F5 336 aa13.53□□□□□ -0.24
LINC00339-208ENST00000634934 ARPINQ7Z6K5 226 aa13.53□□□□□ -0.24
LINC00339-208ENST00000634934 PROSER1Q86XN7 944 aa13.53□□□□□ -0.24
LINC00339-208ENST00000634934 CCDC116Q8IYX3 515 aa13.53□□□□□ -0.24
LINC00339-208ENST00000634934 SAMD14Q8IZD0 417 aaPredicted RBP13.53□□□□□ -0.24
LINC00339-208ENST00000634934 PLPP5Q8NEB5 264 aa13.53□□□□□ -0.24
LINC00339-208ENST00000634934 METTL21AQ8WXB1 218 aa13.53□□□□□ -0.24
LINC00339-208ENST00000634934 FGF11Q92914 225 aa13.53□□□□□ -0.24
LINC00339-208ENST00000634934 DGCR14Q96DF8 476 aaKnown RBP13.53□□□□□ -0.24
LINC00339-208ENST00000634934 ZNF764Q96H86 408 aaPredicted RBP13.53□□□□□ -0.24
LINC00339-208ENST00000634934 OR52E6Q96RD3 313 aa13.53□□□□□ -0.24
LINC00339-208ENST00000634934 GPR87Q9BY21 358 aa13.53□□□□□ -0.24
LINC00339-208ENST00000634934 BHLHE41Q9C0J9 482 aaPredicted RBP13.53□□□□□ -0.24
LINC00339-208ENST00000634934 MUC13Q9H3R2 512 aa13.53□□□□□ -0.24
LINC00339-208ENST00000634934 GPN2Q9H9Y4 310 aaPredicted RBP13.53□□□□□ -0.24
LINC00339-208ENST00000634934 DKK4Q9UBT3 224 aa13.53□□□□□ -0.24
LINC00339-208ENST00000634934 CD300AQ9UGN4 299 aa13.53□□□□□ -0.24
LINC00339-208ENST00000634934 TCFL5Q9UL49 500 aa13.53□□□□□ -0.24
LINC00339-208ENST00000634934 CFLARO15519 480 aa13.52□□□□□ -0.25
LINC00339-208ENST00000634934 OR10H2O60403 315 aa13.52□□□□□ -0.25
LINC00339-208ENST00000634934 ALOX12BO75342 701 aa13.52□□□□□ -0.25
LINC00339-208ENST00000634934 UMODP07911 640 aa13.52□□□□□ -0.25
LINC00339-208ENST00000634934 SNRPB2P08579 225 aaKnown RBP13.52□□□□□ -0.25
LINC00339-208ENST00000634934 ZCCHC18P0CG32 403 aa13.52□□□□□ -0.25
LINC00339-208ENST00000634934 SMIM18P0DKX4 95 aa13.52□□□□□ -0.25
LINC00339-208ENST00000634934 PORP16435 677 aaPredicted RBP13.52□□□□□ -0.25
LINC00339-208ENST00000634934 NCBP2P52298 156 aaKnown RBP eCLIP13.52□□□□□ -0.25
LINC00339-208ENST00000634934 PSME3P61289 254 aa13.52□□□□□ -0.25
LINC00339-208ENST00000634934 PHC1P78364 1004 aa13.52□□□□□ -0.25
LINC00339-208ENST00000634934 TXNL4AP83876 142 aaKnown RBP13.52□□□□□ -0.25
LINC00339-208ENST00000634934 LSAMPQ13449 338 aa13.52□□□□□ -0.25
LINC00339-208ENST00000634934 APOFQ13790 326 aa13.52□□□□□ -0.25
LINC00339-208ENST00000634934 SERTAD2Q14140 314 aa13.52□□□□□ -0.25
LINC00339-208ENST00000634934 RCAN2Q14206 197 aa13.52□□□□□ -0.25
LINC00339-208ENST00000634934 MPEG1Q2M385 716 aa13.52□□□□□ -0.25
LINC00339-208ENST00000634934 GRAMD1BQ3KR37 738 aa13.52□□□□□ -0.25
LINC00339-208ENST00000634934 SAMD4BQ5PRF9 694 aaKnown RBP13.52□□□□□ -0.25
LINC00339-208ENST00000634934 ANXA8L1Q5VT79 327 aa13.52□□□□□ -0.25
LINC00339-208ENST00000634934 LANCL3Q6ZV70 420 aa13.52□□□□□ -0.25
LINC00339-208ENST00000634934 CAMKMTQ7Z624 323 aa13.52□□□□□ -0.25
LINC00339-208ENST00000634934 VASH2Q86V25 355 aa13.52□□□□□ -0.25
LINC00339-208ENST00000634934 ANKRD46Q86W74 232 aa13.52□□□□□ -0.25
LINC00339-208ENST00000634934 LRRC25Q8N386 305 aaPredicted RBP13.52□□□□□ -0.25
LINC00339-208ENST00000634934 PACRGLQ8N7B6 248 aa13.52□□□□□ -0.25
LINC00339-208ENST00000634934 KDF1Q8NAX2 398 aaPredicted RBP13.52□□□□□ -0.25
LINC00339-208ENST00000634934 VPS37AQ8NEZ2 397 aa13.52□□□□□ -0.25
LINC00339-208ENST00000634934 OR8J2Q8NGG1 315 aa13.52□□□□□ -0.25
LINC00339-208ENST00000634934 PPWD1Q96BP3 646 aaKnown RBP13.52□□□□□ -0.25
LINC00339-208ENST00000634934 DGAT2Q96PD7 388 aa13.52□□□□□ -0.25
LINC00339-208ENST00000634934 PTTG2Q9NZH5 202 aa13.52□□□□□ -0.25
LINC00339-208ENST00000634934 IL17BQ9UHF5 180 aa13.52□□□□□ -0.25
LINC00339-208ENST00000634934 KCND3Q9UK17 655 aa13.52□□□□□ -0.25
LINC00339-208ENST00000634934 ZMIZ1Q9ULJ6 1067 aa13.52□□□□□ -0.25
LINC00339-208ENST00000634934 IGKV3D-11A0A0A0MRZ8 115 aa13.51□□□□□ -0.25
LINC00339-208ENST00000634934 A0A1W2PRB8 838 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms