RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 GK5Q6ZS86 529 aa16.94■□□□□ 0.3
SYNGR3-204ENST00000564642 HOMEZQ8IX15 550 aa16.94■□□□□ 0.3
SYNGR3-204ENST00000564642 SAMD14Q8IZD0 417 aaPredicted RBP16.94■□□□□ 0.3
SYNGR3-204ENST00000564642 LRRC25Q8N386 305 aaPredicted RBP16.94■□□□□ 0.3
SYNGR3-204ENST00000564642 ZNF615Q8N8J6 731 aa16.94■□□□□ 0.3
SYNGR3-204ENST00000564642 EXOSC8Q96B26 276 aaKnown RBP16.94■□□□□ 0.3
SYNGR3-204ENST00000564642 SPACA9Q96E40 222 aaPredicted RBP16.94■□□□□ 0.3
SYNGR3-204ENST00000564642 CNRIP1Q96F85 164 aaPredicted RBP16.94■□□□□ 0.3
SYNGR3-204ENST00000564642 TNFRSF12AQ9NP84 129 aa16.94■□□□□ 0.3
SYNGR3-204ENST00000564642 GIMAP4Q9NUV9 329 aa16.94■□□□□ 0.3
SYNGR3-204ENST00000564642 SUCOQ9UBS9 1254 aaKnown RBP16.94■□□□□ 0.3
SYNGR3-204ENST00000564642 BCAP29Q9UHQ4 241 aa16.94■□□□□ 0.3
SYNGR3-204ENST00000564642 CFL2Q9Y281 166 aa16.94■□□□□ 0.3
SYNGR3-204ENST00000564642 FIS1Q9Y3D6 152 aa16.94■□□□□ 0.3
SYNGR3-204ENST00000564642 CAPN14A8MX76 684 aa16.93■□□□□ 0.3
SYNGR3-204ENST00000564642 SLC28A1O00337 649 aa16.93■□□□□ 0.3
SYNGR3-204ENST00000564642 AZIN1O14977 448 aa16.93■□□□□ 0.3
SYNGR3-204ENST00000564642 RSL1D1O76021 490 aaKnown RBP16.93■□□□□ 0.3
SYNGR3-204ENST00000564642 CCL3P10147 92 aa16.93■□□□□ 0.3
SYNGR3-204ENST00000564642 NRG3P56975 720 aa16.93■□□□□ 0.3
SYNGR3-204ENST00000564642 PPIAP62937 165 aaKnown RBP16.93■□□□□ 0.3
SYNGR3-204ENST00000564642 ZNF763Q0D2J5 394 aa16.93■□□□□ 0.3
SYNGR3-204ENST00000564642 C2orf80Q0P641 193 aa16.93■□□□□ 0.3
SYNGR3-204ENST00000564642 RGS9BPQ6ZS82 235 aa16.93■□□□□ 0.3
SYNGR3-204ENST00000564642 CCDC116Q8IYX3 515 aa16.93■□□□□ 0.3
SYNGR3-204ENST00000564642 FAM13CQ8NE31 585 aa16.93■□□□□ 0.3
SYNGR3-204ENST00000564642 ADCY4Q8NFM4 1077 aa16.93■□□□□ 0.3
SYNGR3-204ENST00000564642 CDC26Q8NHZ8 85 aa16.93■□□□□ 0.3
SYNGR3-204ENST00000564642 C11orf24Q96F05 449 aaPredicted RBP16.93■□□□□ 0.3
SYNGR3-204ENST00000564642 ZNF681Q96N22 645 aa16.93■□□□□ 0.3
SYNGR3-204ENST00000564642 MECRQ9BV79 373 aa16.93■□□□□ 0.3
SYNGR3-204ENST00000564642 EML4Q9HC35 981 aaKnown RBP16.93■□□□□ 0.3
SYNGR3-204ENST00000564642 MAT2BQ9NZL9 334 aa16.93■□□□□ 0.3
SYNGR3-204ENST00000564642 SENP1Q9P0U3 644 aa16.93■□□□□ 0.3
SYNGR3-204ENST00000564642 ENTPD4Q9Y227 616 aa16.93■□□□□ 0.3
SYNGR3-204ENST00000564642 ZNF835Q9Y2P0 537 aa16.93■□□□□ 0.3
SYNGR3-204ENST00000564642 SPTAN1Q13813 2472 aaKnown RBP16.93■□□□□ 0.3
SYNGR3-204ENST00000564642 GTF3C1Q12789 2109 aa16.93■□□□□ 0.3
SYNGR3-204ENST00000564642 PINLYPA6NC86 204 aa16.92■□□□□ 0.3
SYNGR3-204ENST00000564642 RGS16O15492 202 aaPredicted RBP16.92■□□□□ 0.3
SYNGR3-204ENST00000564642 RGS14O43566 566 aa16.92■□□□□ 0.3
SYNGR3-204ENST00000564642 NPHS1O60500 1241 aa16.92■□□□□ 0.3
SYNGR3-204ENST00000564642 ZG16O60844 167 aa16.92■□□□□ 0.3
SYNGR3-204ENST00000564642 SEC22BO75396 215 aa16.92■□□□□ 0.3
SYNGR3-204ENST00000564642 FBXO45P0C2W1 286 aa16.92■□□□□ 0.3
SYNGR3-204ENST00000564642 ESRRAP11474 423 aaPredicted RBP16.92■□□□□ 0.3
SYNGR3-204ENST00000564642 S1PR1P21453 382 aa16.92■□□□□ 0.3
SYNGR3-204ENST00000564642 PTGER1P34995 402 aa16.92■□□□□ 0.3
SYNGR3-204ENST00000564642 HSF1Q00613 529 aa16.92■□□□□ 0.3
SYNGR3-204ENST00000564642 DUSP2Q05923 314 aa16.92■□□□□ 0.3
SYNGR3-204ENST00000564642 C3AR1Q16581 482 aa16.92■□□□□ 0.3
SYNGR3-204ENST00000564642 MTFR2Q6P444 385 aa16.92■□□□□ 0.3
SYNGR3-204ENST00000564642 PAOXQ6QHF9 649 aa16.92■□□□□ 0.3
SYNGR3-204ENST00000564642 LYPD8Q6UX82 237 aa16.92■□□□□ 0.3
SYNGR3-204ENST00000564642 Q6ZPB1 254 aaPredicted RBP16.92■□□□□ 0.3
SYNGR3-204ENST00000564642 SLC22A16Q86VW1 577 aa16.92■□□□□ 0.3
SYNGR3-204ENST00000564642 OR52N2Q8NGI0 321 aa16.92■□□□□ 0.3
SYNGR3-204ENST00000564642 OR5M3Q8NGP4 307 aa16.92■□□□□ 0.3
SYNGR3-204ENST00000564642 FAM76AQ8TAV0 307 aa16.92■□□□□ 0.3
SYNGR3-204ENST00000564642 PAQR8Q8TEZ7 354 aa16.92■□□□□ 0.3
SYNGR3-204ENST00000564642 TTTY12Q9BZ98 90 aa16.92■□□□□ 0.3
SYNGR3-204ENST00000564642 EHD3Q9NZN3 535 aa16.92■□□□□ 0.3
SYNGR3-204ENST00000564642 POLR3HQ9Y535 204 aaPredicted RBP16.92■□□□□ 0.3
SYNGR3-204ENST00000564642 NPFFR2Q9Y5X5 522 aa16.92■□□□□ 0.3
SYNGR3-204ENST00000564642 MYO7BQ6PIF6 2116 aa16.91■□□□□ 0.3
SYNGR3-204ENST00000564642 A0A0G2JMM0 328 aa16.91■□□□□ 0.3
SYNGR3-204ENST00000564642 A0A1W2PPB8 328 aa16.91■□□□□ 0.3
SYNGR3-204ENST00000564642 A0A1W2PRS3 328 aa16.91■□□□□ 0.3
SYNGR3-204ENST00000564642 FAM166BA8MTA8 275 aa16.91■□□□□ 0.3
SYNGR3-204ENST00000564642 KIR3DP1A8MWS1 328 aa16.91■□□□□ 0.3
SYNGR3-204ENST00000564642 PRRG2O14669 202 aa16.91■□□□□ 0.3
SYNGR3-204ENST00000564642 PDE9AO76083 593 aa16.91■□□□□ 0.3
SYNGR3-204ENST00000564642 CREB1P16220 341 aa16.91■□□□□ 0.3
SYNGR3-204ENST00000564642 MPIP34949 423 aa16.91■□□□□ 0.3
SYNGR3-204ENST00000564642 PIGAP37287 484 aa16.91■□□□□ 0.3
SYNGR3-204ENST00000564642 DNASE1L1P49184 302 aa16.91■□□□□ 0.3
SYNGR3-204ENST00000564642 TMED10P49755 219 aaKnown RBP16.91■□□□□ 0.3
SYNGR3-204ENST00000564642 ZNF844Q08AG5 666 aa16.91■□□□□ 0.3
SYNGR3-204ENST00000564642 MGAT2Q10469 447 aa16.91■□□□□ 0.3
SYNGR3-204ENST00000564642 EXOSC7Q15024 291 aaKnown RBP16.91■□□□□ 0.3
SYNGR3-204ENST00000564642 LTB4RQ15722 352 aa16.91■□□□□ 0.3
SYNGR3-204ENST00000564642 TRMT12Q53H54 448 aaKnown RBP16.91■□□□□ 0.3
SYNGR3-204ENST00000564642 NOXRED1Q6NXP6 359 aa16.91■□□□□ 0.3
SYNGR3-204ENST00000564642 MAMDC2Q7Z304 686 aaPredicted RBP16.91■□□□□ 0.3
SYNGR3-204ENST00000564642 ZNF441Q8N8Z8 693 aa16.91■□□□□ 0.3
SYNGR3-204ENST00000564642 C17orf47Q8NEP4 570 aa16.91■□□□□ 0.3
SYNGR3-204ENST00000564642 ADIPOR1Q96A54 375 aa16.91■□□□□ 0.3
SYNGR3-204ENST00000564642 CTHRC1Q96CG8 243 aa16.91■□□□□ 0.3
SYNGR3-204ENST00000564642 METTL2AQ96IZ6 378 aaKnown RBP16.91■□□□□ 0.3
SYNGR3-204ENST00000564642 DEFB127Q9H1M4 99 aa16.91■□□□□ 0.3
SYNGR3-204ENST00000564642 IL1RL2Q9HB29 575 aa16.91■□□□□ 0.3
SYNGR3-204ENST00000564642 SH2D2AQ9NP31 389 aa16.91■□□□□ 0.3
SYNGR3-204ENST00000564642 SLC35C2Q9NQQ7 365 aa16.91■□□□□ 0.3
SYNGR3-204ENST00000564642 CNIH4Q9P003 139 aa16.91■□□□□ 0.3
SYNGR3-204ENST00000564642 ZNF639Q9UID6 485 aa16.91■□□□□ 0.3
SYNGR3-204ENST00000564642 TINAGQ9UJW2 476 aa16.91■□□□□ 0.3
SYNGR3-204ENST00000564642 WBP11Q9Y2W2 641 aaKnown RBP16.91■□□□□ 0.3
SYNGR3-204ENST00000564642 USP9YO00507 2555 aaPredicted RBP16.91■□□□□ 0.3
SYNGR3-204ENST00000564642 A0A1B0GTH9 108 aa16.9■□□□□ 0.3
SYNGR3-204ENST00000564642 TP53I11O14683 189 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms