RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 TUBGCP3Q96CW5 907 aa17.32■□□□□ 0.36
CASC4-209ENST00000559222 SCMH1Q96GD3 660 aa17.32■□□□□ 0.36
CASC4-209ENST00000559222 METTL2AQ96IZ6 378 aaKnown RBP17.32■□□□□ 0.36
CASC4-209ENST00000559222 ART5Q96L15 291 aa17.32■□□□□ 0.36
CASC4-209ENST00000559222 PPP3R2Q96LZ3 170 aa17.32■□□□□ 0.36
CASC4-209ENST00000559222 NUF2Q9BZD4 464 aa17.32■□□□□ 0.36
CASC4-209ENST00000559222 TRIM45Q9H8W5 580 aaPredicted RBP17.32■□□□□ 0.36
CASC4-209ENST00000559222 ENTPD4Q9Y227 616 aa17.32■□□□□ 0.36
CASC4-209ENST00000559222 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.32■□□□□ 0.36
CASC4-209ENST00000559222 ZNF780BQ9Y6R6 833 aa17.32■□□□□ 0.36
CASC4-209ENST00000559222 UQCRHLA0A096LP55 91 aa17.31■□□□□ 0.36
CASC4-209ENST00000559222 MYO1GB0I1T2 1018 aa17.31■□□□□ 0.36
CASC4-209ENST00000559222 DYRK3O43781 588 aa17.31■□□□□ 0.36
CASC4-209ENST00000559222 EFNA1P20827 205 aaPredicted RBP17.31■□□□□ 0.36
CASC4-209ENST00000559222 GSTM5P46439 218 aa17.31■□□□□ 0.36
CASC4-209ENST00000559222 MAP4K2Q12851 820 aa17.31■□□□□ 0.36
CASC4-209ENST00000559222 PTGR1Q14914 329 aa17.31■□□□□ 0.36
CASC4-209ENST00000559222 ATP6AP1LQ52LC2 224 aa17.31■□□□□ 0.36
CASC4-209ENST00000559222 IKBIPQ70UQ0 350 aa17.31■□□□□ 0.36
CASC4-209ENST00000559222 ZNF441Q8N8Z8 693 aa17.31■□□□□ 0.36
CASC4-209ENST00000559222 FNDC5Q8NAU1 212 aa17.31■□□□□ 0.36
CASC4-209ENST00000559222 CTHRC1Q96CG8 243 aa17.31■□□□□ 0.36
CASC4-209ENST00000559222 OR10A5Q9H207 317 aa17.31■□□□□ 0.36
CASC4-209ENST00000559222 MANSC1Q9H8J5 431 aa17.31■□□□□ 0.36
CASC4-209ENST00000559222 AKTIPQ9H8T0 292 aa17.31■□□□□ 0.36
CASC4-209ENST00000559222 MIEF1Q9NQG6 463 aa17.31■□□□□ 0.36
CASC4-209ENST00000559222 EHD3Q9NZN3 535 aa17.31■□□□□ 0.36
CASC4-209ENST00000559222 PSME2Q9UL46 239 aa17.31■□□□□ 0.36
CASC4-209ENST00000559222 YARS2Q9Y2Z4 477 aaKnown RBP17.31■□□□□ 0.36
CASC4-209ENST00000559222 A0A0G2JMM0 328 aa17.3■□□□□ 0.36
CASC4-209ENST00000559222 A0A1W2PPB8 328 aa17.3■□□□□ 0.36
CASC4-209ENST00000559222 A0A1W2PRS3 328 aa17.3■□□□□ 0.36
CASC4-209ENST00000559222 KIR3DP1A8MWS1 328 aa17.3■□□□□ 0.36
CASC4-209ENST00000559222 SLC25A12O75746 678 aa17.3■□□□□ 0.36
CASC4-209ENST00000559222 KITP10721 976 aa17.3■□□□□ 0.36
CASC4-209ENST00000559222 CYB561P49447 251 aa17.3■□□□□ 0.36
CASC4-209ENST00000559222 PDE7AQ13946 482 aa17.3■□□□□ 0.36
CASC4-209ENST00000559222 NNATQ16517 81 aa17.3■□□□□ 0.36
CASC4-209ENST00000559222 PIGGQ5H8A4 983 aa17.3■□□□□ 0.36
CASC4-209ENST00000559222 IL23RQ5VWK5 629 aa17.3■□□□□ 0.36
CASC4-209ENST00000559222 IL20RBQ6UXL0 311 aa17.3■□□□□ 0.36
CASC4-209ENST00000559222 MAVSQ7Z434 540 aa17.3■□□□□ 0.36
CASC4-209ENST00000559222 GALNTL5Q7Z4T8 443 aa17.3■□□□□ 0.36
CASC4-209ENST00000559222 CYP4Z2PQ8N1L4 340 aa17.3■□□□□ 0.36
CASC4-209ENST00000559222 TMEM156Q8N614 296 aa17.3■□□□□ 0.36
CASC4-209ENST00000559222 C7orf57Q8NEG2 295 aa17.3■□□□□ 0.36
CASC4-209ENST00000559222 OR7G2Q8NG99 324 aa17.3■□□□□ 0.36
CASC4-209ENST00000559222 OR52R1Q8NGF1 315 aa17.3■□□□□ 0.36
CASC4-209ENST00000559222 C16orf52Q8NHV5 167 aa17.3■□□□□ 0.36
CASC4-209ENST00000559222 NUBPLQ8TB37 319 aa17.3■□□□□ 0.36
CASC4-209ENST00000559222 ASB15Q8WXK1 588 aa17.3■□□□□ 0.36
CASC4-209ENST00000559222 ZNF75CPQ92670 426 aaPredicted RBP17.3■□□□□ 0.36
CASC4-209ENST00000559222 ITPAQ9BY32 194 aa17.3■□□□□ 0.36
CASC4-209ENST00000559222 GLIPR2Q9H4G4 154 aa17.3■□□□□ 0.36
CASC4-209ENST00000559222 THAP1Q9NVV9 213 aa17.3■□□□□ 0.36
CASC4-209ENST00000559222 TMED5Q9Y3A6 229 aa17.3■□□□□ 0.36
CASC4-209ENST00000559222 COPG1Q9Y678 874 aaKnown RBP17.3■□□□□ 0.36
CASC4-209ENST00000559222 HMGB1P1B2RPK0 211 aaPredicted RBP17.29■□□□□ 0.36
CASC4-209ENST00000559222 G3V3Y1 287 aa17.29■□□□□ 0.36
CASC4-209ENST00000559222 SDHDO14521 159 aa17.29■□□□□ 0.36
CASC4-209ENST00000559222 NME2P1O60361 137 aa17.29■□□□□ 0.36
CASC4-209ENST00000559222 SP1P08047 785 aa17.29■□□□□ 0.36
CASC4-209ENST00000559222 GPX3P22352 226 aa17.29■□□□□ 0.36
CASC4-209ENST00000559222 NME2P22392 152 aa17.29■□□□□ 0.36
CASC4-209ENST00000559222 NCBP2P52298 156 aaKnown RBP eCLIP17.29■□□□□ 0.36
CASC4-209ENST00000559222 MRPL49Q13405 166 aaKnown RBP17.29■□□□□ 0.36
CASC4-209ENST00000559222 FHL5Q5TD97 284 aa17.29■□□□□ 0.36
CASC4-209ENST00000559222 SLC25A25Q6KCM7 469 aa17.29■□□□□ 0.36
CASC4-209ENST00000559222 RPUSD3Q6P087 351 aaKnown RBP17.29■□□□□ 0.36
CASC4-209ENST00000559222 SLC29A4Q7RTT9 530 aa17.29■□□□□ 0.36
CASC4-209ENST00000559222 ZNF551Q7Z340 670 aaPredicted RBP17.29■□□□□ 0.36
CASC4-209ENST00000559222 FAM9CQ8IZT9 166 aa17.29■□□□□ 0.36
CASC4-209ENST00000559222 KRTCAP2Q8N6L1 136 aa17.29■□□□□ 0.36
CASC4-209ENST00000559222 OR7A2PQ8NGA2 310 aa17.29■□□□□ 0.36
CASC4-209ENST00000559222 OR5L2Q8NGL0 311 aa17.29■□□□□ 0.36
CASC4-209ENST00000559222 ZNF675Q8TD23 568 aa17.29■□□□□ 0.36
CASC4-209ENST00000559222 ADIPOR1Q96A54 375 aa17.29■□□□□ 0.36
CASC4-209ENST00000559222 BBS4Q96RK4 519 aa17.29■□□□□ 0.36
CASC4-209ENST00000559222 BARD1Q99728 777 aaKnown RBP17.29■□□□□ 0.36
CASC4-209ENST00000559222 REEP4Q9H6H4 257 aa17.29■□□□□ 0.36
CASC4-209ENST00000559222 DEPPQ9NTK1 212 aa17.29■□□□□ 0.36
CASC4-209ENST00000559222 TAS2R7Q9NYW3 318 aa17.29■□□□□ 0.36
CASC4-209ENST00000559222 BCAP29Q9UHQ4 241 aa17.29■□□□□ 0.36
CASC4-209ENST00000559222 PINLYPA6NC86 204 aa17.28■□□□□ 0.36
CASC4-209ENST00000559222 OR6C76A6NM76 312 aa17.28■□□□□ 0.36
CASC4-209ENST00000559222 A8MVJ9 347 aa17.28■□□□□ 0.36
CASC4-209ENST00000559222 TCP11X1B4DZS4 312 aa17.28■□□□□ 0.36
CASC4-209ENST00000559222 G6PDP11413 515 aa17.28■□□□□ 0.36
CASC4-209ENST00000559222 MST1P26927 711 aa17.28■□□□□ 0.36
CASC4-209ENST00000559222 MC3RP41968 323 aa17.28■□□□□ 0.36
CASC4-209ENST00000559222 EMDP50402 254 aa17.28■□□□□ 0.36
CASC4-209ENST00000559222 NR0B1P51843 470 aaKnown RBP17.28■□□□□ 0.36
CASC4-209ENST00000559222 DIO3P55073 304 aa17.28■□□□□ 0.36
CASC4-209ENST00000559222 GPR85P60893 370 aa17.28■□□□□ 0.36
CASC4-209ENST00000559222 PPP2R2AP63151 447 aa17.28■□□□□ 0.36
CASC4-209ENST00000559222 MAPKAPK3Q16644 382 aa17.28■□□□□ 0.36
CASC4-209ENST00000559222 C6orf163Q5TEZ5 329 aa17.28■□□□□ 0.36
CASC4-209ENST00000559222 TMEM107Q6UX40 140 aa17.28■□□□□ 0.36
CASC4-209ENST00000559222 WDR75Q8IWA0 830 aaKnown RBP17.28■□□□□ 0.36
CASC4-209ENST00000559222 PRR22Q8IZ63 422 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms