RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 GPS1Q13098 491 aa13.86□□□□□ -0.19
CLSTN3-216ENST00000545663 SERTAD2Q14140 314 aa13.86□□□□□ -0.19
CLSTN3-216ENST00000545663 EFTUD2Q15029 972 aaKnown RBP eCLIP13.86□□□□□ -0.192e-7■■■■■ 36.5
CLSTN3-216ENST00000545663 RPS6KA2Q15349 733 aa13.86□□□□□ -0.19
CLSTN3-216ENST00000545663 WHAMMP3Q1A5X7 153 aa13.86□□□□□ -0.19
CLSTN3-216ENST00000545663 DESI1Q6ICB0 168 aa13.86□□□□□ -0.19
CLSTN3-216ENST00000545663 ENPP6Q6UWR7 440 aa13.86□□□□□ -0.19
CLSTN3-216ENST00000545663 GSTA5Q7RTV2 222 aa13.86□□□□□ -0.19
CLSTN3-216ENST00000545663 MNS1Q8NEH6 495 aa13.86□□□□□ -0.19
CLSTN3-216ENST00000545663 OR14L1PQ8NHC6 308 aa13.86□□□□□ -0.19
CLSTN3-216ENST00000545663 FIG4Q92562 907 aa13.86□□□□□ -0.19
CLSTN3-216ENST00000545663 MS4A14Q96JA4 679 aa13.86□□□□□ -0.19
CLSTN3-216ENST00000545663 BARX1Q9HBU1 254 aaPredicted RBP13.86□□□□□ -0.19
CLSTN3-216ENST00000545663 FBXO6Q9NRD1 293 aaPredicted RBP13.86□□□□□ -0.19
CLSTN3-216ENST00000545663 RAB6BQ9NRW1 208 aa13.86□□□□□ -0.19
CLSTN3-216ENST00000545663 A0A1W2PP18 115 aa13.85□□□□□ -0.19
CLSTN3-216ENST00000545663 ESPNB1AK53 854 aa13.85□□□□□ -0.19
CLSTN3-216ENST00000545663 PFDN6O15212 129 aa13.85□□□□□ -0.19
CLSTN3-216ENST00000545663 HCRTR2O43614 444 aa13.85□□□□□ -0.19
CLSTN3-216ENST00000545663 URI1O94763 535 aaPredicted RBP13.85□□□□□ -0.19
CLSTN3-216ENST00000545663 TBX6O95947 436 aaPredicted RBP13.85□□□□□ -0.19
CLSTN3-216ENST00000545663 GFRA1P56159 465 aa13.85□□□□□ -0.19
CLSTN3-216ENST00000545663 DUPD1Q68J44 220 aa13.85□□□□□ -0.19
CLSTN3-216ENST00000545663 NXPE4Q6UWF7 544 aa13.85□□□□□ -0.19
CLSTN3-216ENST00000545663 ATG4DQ86TL0 474 aaPredicted RBP13.85□□□□□ -0.19
CLSTN3-216ENST00000545663 RFLNBQ8N5W9 214 aa13.85□□□□□ -0.19
CLSTN3-216ENST00000545663 OR1J4Q8NGS1 313 aa13.85□□□□□ -0.19
CLSTN3-216ENST00000545663 C1orf54Q8WWF1 131 aa13.85□□□□□ -0.19
CLSTN3-216ENST00000545663 CCT6BQ92526 530 aa13.85□□□□□ -0.19
CLSTN3-216ENST00000545663 KCNJ9Q92806 393 aa13.85□□□□□ -0.19
CLSTN3-216ENST00000545663 TMEM41AQ96HV5 264 aa13.85□□□□□ -0.19
CLSTN3-216ENST00000545663 MAPKAP1Q9BPZ7 522 aa13.85□□□□□ -0.19
CLSTN3-216ENST00000545663 AIF1LQ9BQI0 150 aa13.85□□□□□ -0.19
CLSTN3-216ENST00000545663 PAK5Q9P286 719 aa13.85□□□□□ -0.19
CLSTN3-216ENST00000545663 KCNS2Q9ULS6 477 aa13.85□□□□□ -0.19
CLSTN3-216ENST00000545663 ZNF281Q9Y2X9 895 aa13.85□□□□□ -0.19
CLSTN3-216ENST00000545663 LOC100289279A0A1B0GTE1 492 aa13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 SYNDIG1LA6NDD5 238 aa13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 SLC22A20A6NK97 555 aa13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 ELOA3DA6NLF2 546 aaPredicted RBP13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 EMC8O43402 210 aa13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 FGF17O60258 216 aa13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 KIAA0513O60268 411 aa13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 CD8BP10966 210 aa13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 TCEA1P23193 301 aaKnown RBP13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 MGAT1P26572 445 aa13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 GCKP35557 465 aa13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 FDFT1P37268 417 aa13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 STT3AP46977 705 aa13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 NUDT6P53370 316 aa13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 EBPQ15125 230 aaKnown RBP13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 ELOA3BQ3SY89 546 aa13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 OR2A2Q6IF42 318 aa13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 FAM166AQ6J272 317 aa13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 NEPROQ6NW34 567 aa13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 CCDC137Q6PK04 289 aaKnown RBP13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 STAC2Q6ZMT1 411 aa13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 TMPRSS11BQ86T26 416 aa13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 DENND6AQ8IWF6 608 aa13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 PRR22Q8IZ63 422 aa13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 ELOA3Q8NG57 546 aa13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 ATG4AQ8WYN0 398 aa13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 FBXL20Q96IG2 436 aa13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 DGAT2Q96PD7 388 aa13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 SERINC2Q96SA4 455 aa13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 TRAF4Q9BUZ4 470 aaPredicted RBP13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 KIFC1Q9BW19 673 aa13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 SYBUQ9NX95 663 aa13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 ARL15Q9NXU5 204 aa13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 RNF112Q9ULX5 631 aa13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 B3GALT5Q9Y2C3 310 aa13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 DLGAP4Q9Y2H0 992 aa13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 RNF115Q9Y4L5 304 aa13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 RYR3Q15413 4870 aa13.84□□□□□ -0.19
CLSTN3-216ENST00000545663 AP3B1O00203 1094 aa13.83□□□□□ -0.2
CLSTN3-216ENST00000545663 VENTXO95231 258 aa13.83□□□□□ -0.2
CLSTN3-216ENST00000545663 IFNB1P01574 187 aa13.83□□□□□ -0.2
CLSTN3-216ENST00000545663 C8GP07360 202 aa13.83□□□□□ -0.2
CLSTN3-216ENST00000545663 COX7A2P14406 83 aa13.83□□□□□ -0.2
CLSTN3-216ENST00000545663 ZNF708P17019 499 aa13.83□□□□□ -0.2
CLSTN3-216ENST00000545663 OGNP20774 298 aaKnown RBP13.83□□□□□ -0.2
CLSTN3-216ENST00000545663 HERVK_113P63132 956 aa13.83□□□□□ -0.2
CLSTN3-216ENST00000545663 ERVK-8P63133 956 aa13.83□□□□□ -0.2
CLSTN3-216ENST00000545663 TIAL1Q01085 375 aaKnown RBP eCLIP13.83□□□□□ -0.2
CLSTN3-216ENST00000545663 SNX1Q13596 522 aa13.83□□□□□ -0.2
CLSTN3-216ENST00000545663 ADNP2Q6IQ32 1131 aa13.83□□□□□ -0.2
CLSTN3-216ENST00000545663 CLEC2AQ6UVW9 174 aa13.83□□□□□ -0.2
CLSTN3-216ENST00000545663 SCIMPQ6UWF3 145 aa13.83□□□□□ -0.2
CLSTN3-216ENST00000545663 SLC29A4Q7RTT9 530 aa13.83□□□□□ -0.2
CLSTN3-216ENST00000545663 ZNF525Q8N782 197 aa13.83□□□□□ -0.2
CLSTN3-216ENST00000545663 MSI2Q96DH6 328 aaKnown RBP13.83□□□□□ -0.2
CLSTN3-216ENST00000545663 C11orf24Q96F05 449 aaPredicted RBP13.83□□□□□ -0.2
CLSTN3-216ENST00000545663 ERVK-6Q9BXR3 956 aa13.83□□□□□ -0.2
CLSTN3-216ENST00000545663 OR2B2Q9GZK3 357 aa13.83□□□□□ -0.2
CLSTN3-216ENST00000545663 IL22Q9GZX6 179 aa13.83□□□□□ -0.2
CLSTN3-216ENST00000545663 PELI2Q9HAT8 420 aa13.83□□□□□ -0.2
CLSTN3-216ENST00000545663 GALNT9Q9HCQ5 603 aa13.83□□□□□ -0.2
CLSTN3-216ENST00000545663 PROCRQ9UNN8 238 aa13.83□□□□□ -0.2
CLSTN3-216ENST00000545663 ERVK-19Q9WJR5 959 aa13.83□□□□□ -0.2
CLSTN3-216ENST00000545663 IQANK1A0A1B0GTG1 560 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms