RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-228ENST00000511676 D6RAR5 112 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 CLDN4O14493 209 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 CASQ2O14958 399 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-228ENST00000511676 DSCR3O14972 297 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 ZNF749O43361 778 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 HNRNPRO43390 633 aaKnown RBP8.55□□□□□ -1.04
NR1I3-228ENST00000511676 FOXS1O43638 330 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 TNFRSF21O75509 655 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 OR2B3O76000 313 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 CPSF4O95639 269 aaKnown RBP8.55□□□□□ -1.04
NR1I3-228ENST00000511676 GPR75O95800 540 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 ONECUT2O95948 504 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 EIF2S1P05198 315 aaKnown RBP8.55□□□□□ -1.04
NR1I3-228ENST00000511676 RPLP0P05388 317 aaKnown RBP8.55□□□□□ -1.04
NR1I3-228ENST00000511676 PORP16435 677 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-228ENST00000511676 TCN1P20061 433 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-228ENST00000511676 CSTF2P33240 577 aaKnown RBP eCLIP8.55□□□□□ -1.04
NR1I3-228ENST00000511676 CHI3L1P36222 383 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-228ENST00000511676 PPM1FP49593 454 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-228ENST00000511676 OR4D2P58180 307 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 RUNX2Q13950 521 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 SELPLGQ14242 412 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 GNA13Q14344 377 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 IL11RAQ14626 422 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 AMZ1Q400G9 498 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 GTDC1Q4AE62 458 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 PERM1Q5SV97 790 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 NKAIN2Q5VXU1 208 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 GLYATQ6IB77 296 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 DNAJC14Q6Y2X3 702 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-228ENST00000511676 CCDC80Q76M96 950 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 SLITRK4Q8IW52 837 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 DTWD1Q8N5C7 304 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 IL22RA1Q8N6P7 574 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 RNF148Q8N7C7 305 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 AMER3Q8N944 861 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 Q8N9G6 341 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-228ENST00000511676 SUN3Q8TAQ9 357 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 NUDT8Q8WV74 236 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 PMM1Q92871 262 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 CIDECQ96AQ7 238 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-228ENST00000511676 EXOSC8Q96B26 276 aaKnown RBP8.55□□□□□ -1.04
NR1I3-228ENST00000511676 ZNF501Q96CX3 271 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-228ENST00000511676 CNRIP1Q96F85 164 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-228ENST00000511676 MACROD1Q9BQ69 325 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 NUDT22Q9BRQ3 303 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 NDC1Q9BTX1 674 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 UGT2B28Q9BY64 529 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 KLHL25Q9H0H3 589 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 GLIPR2Q9H4G4 154 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 IKZF5Q9H5V7 419 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 CXorf36Q9H7Y0 433 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 A4GALTQ9NPC4 353 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 SLAMF7Q9NQ25 335 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 C8orf4Q9NR00 106 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 FGF21Q9NSA1 209 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 SIRT3Q9NTG7 399 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-228ENST00000511676 CUTCQ9NTM9 273 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 CCM2LQ9NUG4 571 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-228ENST00000511676 ANAPC2Q9UJX6 822 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 PACSIN3Q9UKS6 424 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 SAMD4AQ9UPU9 718 aaKnown RBP8.55□□□□□ -1.04
NR1I3-228ENST00000511676 ERVK-11Q9UQG0 969 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 MMACHCQ9Y4U1 282 aa8.55□□□□□ -1.04
NR1I3-228ENST00000511676 FLNBO75369 2602 aaKnown RBP8.55□□□□□ -1.04
NR1I3-228ENST00000511676 HELZ2Q9BYK8 2649 aaKnown RBP8.54□□□□□ -1.04
NR1I3-228ENST00000511676 LOC400499M0QZD8 3231 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 A0A0G2JN53 185 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 IGHV5-10-1A0A0J9YXX1 117 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 A0A1B0GX78 115 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 TCRBV5S2A0A599 114 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 TMEM247A6NEH6 219 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 DUXAA6NLW8 204 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 WASHC1A8K0Z3 465 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 TMEM150CB9EJG8 249 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 CXCR6O00574 342 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 PGRMC2O15173 223 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 GSTA4O15217 222 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 EMC8O43402 210 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 PEX1O43933 1283 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 PLOD3O60568 738 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 PRAMEF10O60809 474 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 CTNSO60931 367 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 KRT36O76013 467 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 SORBS2O94875 1100 aaKnown RBP8.54□□□□□ -1.04
NR1I3-228ENST00000511676 IFNA14P01570 189 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 GSNP06396 782 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 SLC35E2P0CK97 266 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 ARAFP10398 606 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 CPMP14384 443 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 ANPEPP15144 967 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 ATP6V1B2P21281 511 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 CCT3P49368 545 aaKnown RBP8.54□□□□□ -1.04
NR1I3-228ENST00000511676 KHKP50053 298 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 NCBP2P52298 156 aaKnown RBP eCLIP8.54□□□□□ -1.04
NR1I3-228ENST00000511676 MRPS22P82650 360 aaKnown RBP8.54□□□□□ -1.04
NR1I3-228ENST00000511676 ZFP36L1Q07352 338 aaKnown RBP8.54□□□□□ -1.04
NR1I3-228ENST00000511676 NFATC3Q12968 1075 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 CLN3Q13286 438 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms