RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 NEURL3Q96EH8 262 aa12.37□□□□□ -0.43
SNX12-205ENST00000490561 FAM120BQ96EK7 910 aaKnown RBP12.37□□□□□ -0.43
SNX12-205ENST00000490561 FBXL20Q96IG2 436 aa12.37□□□□□ -0.43
SNX12-205ENST00000490561 ANKRD27Q96NW4 1050 aa12.37□□□□□ -0.43
SNX12-205ENST00000490561 MS4A4EQ96PG1 132 aa12.37□□□□□ -0.43
SNX12-205ENST00000490561 BTBD10Q9BSF8 475 aa12.37□□□□□ -0.43
SNX12-205ENST00000490561 ZNF700Q9H0M5 742 aa12.37□□□□□ -0.43
SNX12-205ENST00000490561 SPAG4Q9NPE6 437 aa12.37□□□□□ -0.43
SNX12-205ENST00000490561 ZCCHC3Q9NUD5 404 aaKnown RBP12.37□□□□□ -0.43
SNX12-205ENST00000490561 THUMPD1Q9NXG2 353 aaKnown RBP12.37□□□□□ -0.43
SNX12-205ENST00000490561 COPS7AQ9UBW8 275 aa12.37□□□□□ -0.43
SNX12-205ENST00000490561 PRODH2Q9UF12 536 aa12.37□□□□□ -0.43
SNX12-205ENST00000490561 FER1L5A0AVI2 2057 aa12.37□□□□□ -0.43
SNX12-205ENST00000490561 SDK2Q58EX2 2172 aa12.36□□□□□ -0.43
SNX12-205ENST00000490561 A0A1W2PS29 197 aa12.36□□□□□ -0.43
SNX12-205ENST00000490561 OR2W5A6NFC9 320 aa12.36□□□□□ -0.43
SNX12-205ENST00000490561 OR6C76A6NM76 312 aa12.36□□□□□ -0.43
SNX12-205ENST00000490561 FXYD1O00168 92 aa12.36□□□□□ -0.43
SNX12-205ENST00000490561 CLIC1O00299 241 aa12.36□□□□□ -0.43
SNX12-205ENST00000490561 GYG2O15488 501 aa12.36□□□□□ -0.43
SNX12-205ENST00000490561 GSNP06396 782 aa12.36□□□□□ -0.43
SNX12-205ENST00000490561 CDKN2CP42773 168 aa12.36□□□□□ -0.43
SNX12-205ENST00000490561 PRIM2P49643 509 aa12.36□□□□□ -0.43
SNX12-205ENST00000490561 PSME3P61289 254 aa12.36□□□□□ -0.43
SNX12-205ENST00000490561 PSPHP78330 225 aa12.36□□□□□ -0.43
SNX12-205ENST00000490561 MGAT2Q10469 447 aa12.36□□□□□ -0.43
SNX12-205ENST00000490561 FUT7Q11130 342 aa12.36□□□□□ -0.43
SNX12-205ENST00000490561 FADDQ13158 208 aa12.36□□□□□ -0.43
SNX12-205ENST00000490561 TP53BP2Q13625 1128 aa12.36□□□□□ -0.43
SNX12-205ENST00000490561 ZNF267Q14586 743 aaPredicted RBP12.36□□□□□ -0.43
SNX12-205ENST00000490561 LTB4RQ15722 352 aa12.36□□□□□ -0.43
SNX12-205ENST00000490561 EXT1Q16394 746 aa12.36□□□□□ -0.43
SNX12-205ENST00000490561 FHL5Q5TD97 284 aa12.36□□□□□ -0.43
SNX12-205ENST00000490561 SAXO2Q658L1 398 aa12.36□□□□□ -0.43
SNX12-205ENST00000490561 FAAH2Q6GMR7 532 aa12.36□□□□□ -0.43
SNX12-205ENST00000490561 C8orf82Q6P1X6 216 aaPredicted RBP12.36□□□□□ -0.43
SNX12-205ENST00000490561 PAPD4Q6PIY7 484 aaKnown RBP12.36□□□□□ -0.43
SNX12-205ENST00000490561 LANCL3Q6ZV70 420 aa12.36□□□□□ -0.43
SNX12-205ENST00000490561 RBM15BQ8NDT2 890 aaKnown RBP12.36□□□□□ -0.43
SNX12-205ENST00000490561 ZNF248Q8NDW4 579 aa12.36□□□□□ -0.43
SNX12-205ENST00000490561 NUP43Q8NFH3 380 aa12.36□□□□□ -0.43
SNX12-205ENST00000490561 ADCY4Q8NFM4 1077 aa12.36□□□□□ -0.43
SNX12-205ENST00000490561 OR7G2Q8NG99 324 aa12.36□□□□□ -0.43
SNX12-205ENST00000490561 SNIP1Q8TAD8 396 aaKnown RBP12.36□□□□□ -0.43
SNX12-205ENST00000490561 ZFP90Q8TF47 636 aa12.36□□□□□ -0.43
SNX12-205ENST00000490561 PTPMT1Q8WUK0 201 aaPredicted RBP12.36□□□□□ -0.43
SNX12-205ENST00000490561 KAT2AQ92830 837 aa12.36□□□□□ -0.43
SNX12-205ENST00000490561 GPATCH1Q9BRR8 931 aaKnown RBP12.36□□□□□ -0.43
SNX12-205ENST00000490561 SPATA9Q9BWV2 254 aa12.36□□□□□ -0.43
SNX12-205ENST00000490561 DPH1Q9BZG8 443 aa12.36□□□□□ -0.43
SNX12-205ENST00000490561 TPT1P8Q9HAU6 139 aa12.36□□□□□ -0.43
SNX12-205ENST00000490561 IL1RL2Q9HB29 575 aa12.36□□□□□ -0.43
SNX12-205ENST00000490561 RYDENQ9NUL5 291 aaKnown RBP12.36□□□□□ -0.43
SNX12-205ENST00000490561 VAPAQ9P0L0 249 aa12.36□□□□□ -0.43
SNX12-205ENST00000490561 ZNF639Q9UID6 485 aa12.36□□□□□ -0.43
SNX12-205ENST00000490561 PRPF19Q9UMS4 504 aaKnown RBP12.36□□□□□ -0.43
SNX12-205ENST00000490561 PPIEQ9UNP9 301 aaKnown RBP12.36□□□□□ -0.43
SNX12-205ENST00000490561 L3MBTL1Q9Y468 752 aa12.36□□□□□ -0.43
SNX12-205ENST00000490561 DMXL1Q9Y485 3027 aa12.35□□□□□ -0.43
SNX12-205ENST00000490561 SEC16AO15027 2179 aa12.35□□□□□ -0.43
SNX12-205ENST00000490561 PEX12O00623 359 aa12.35□□□□□ -0.43
SNX12-205ENST00000490561 CREG1O75629 220 aa12.35□□□□□ -0.43
SNX12-205ENST00000490561 AGR2O95994 175 aa12.35□□□□□ -0.43
SNX12-205ENST00000490561 ICAM2P13598 275 aa12.35□□□□□ -0.43
SNX12-205ENST00000490561 CPOXP36551 454 aa12.35□□□□□ -0.43
SNX12-205ENST00000490561 PGDP52209 483 aa12.35□□□□□ -0.43
SNX12-205ENST00000490561 EFNA3P52797 238 aa12.35□□□□□ -0.43
SNX12-205ENST00000490561 GAB1Q13480 694 aa12.35□□□□□ -0.43
SNX12-205ENST00000490561 CRTC2Q53ET0 693 aaPredicted RBP12.35□□□□□ -0.43
SNX12-205ENST00000490561 NANOGP8Q6NSW7 305 aa12.35□□□□□ -0.43
SNX12-205ENST00000490561 RNF111Q6ZNA4 994 aa12.35□□□□□ -0.43
SNX12-205ENST00000490561 RINLQ6ZS11 566 aa12.35□□□□□ -0.43
SNX12-205ENST00000490561 NDUFAF7Q7L592 441 aa12.35□□□□□ -0.43
SNX12-205ENST00000490561 SZRD1Q7Z422 152 aa12.35□□□□□ -0.43
SNX12-205ENST00000490561 C6orf120Q7Z4R8 191 aa12.35□□□□□ -0.43
SNX12-205ENST00000490561 MSRB3Q8IXL7 192 aa12.35□□□□□ -0.43
SNX12-205ENST00000490561 DEFB107AQ8IZN7 70 aa12.35□□□□□ -0.43
SNX12-205ENST00000490561 B3GNT7Q8NFL0 401 aa12.35□□□□□ -0.43
SNX12-205ENST00000490561 OR52N2Q8NGI0 321 aa12.35□□□□□ -0.43
SNX12-205ENST00000490561 OR1N1Q8NGS0 311 aa12.35□□□□□ -0.43
SNX12-205ENST00000490561 SLC2A12Q8TD20 617 aa12.35□□□□□ -0.43
SNX12-205ENST00000490561 KCNE4Q8WWG9 221 aa12.35□□□□□ -0.43
SNX12-205ENST00000490561 VMP1Q96GC9 406 aa12.35□□□□□ -0.43
SNX12-205ENST00000490561 SENP5Q96HI0 755 aaPredicted RBP12.35□□□□□ -0.43
SNX12-205ENST00000490561 SLC35G5Q96KT7 338 aa12.35□□□□□ -0.43
SNX12-205ENST00000490561 CPPED1Q9BRF8 314 aaPredicted RBP12.35□□□□□ -0.43
SNX12-205ENST00000490561 THUMPD3Q9BV44 507 aaKnown RBP12.35□□□□□ -0.43
SNX12-205ENST00000490561 CNPPD1Q9BV87 410 aa12.35□□□□□ -0.43
SNX12-205ENST00000490561 TRIM4Q9C037 500 aa12.35□□□□□ -0.43
SNX12-205ENST00000490561 LRMDAQ9H2I8 198 aa12.35□□□□□ -0.43
SNX12-205ENST00000490561 MMADHCQ9H3L0 296 aaPredicted RBP12.35□□□□□ -0.43
SNX12-205ENST00000490561 EPS8L2Q9H6S3 715 aa12.35□□□□□ -0.43
SNX12-205ENST00000490561 NANOGQ9H9S0 305 aa12.35□□□□□ -0.43
SNX12-205ENST00000490561 TAS2R1Q9NYW7 299 aa12.35□□□□□ -0.43
SNX12-205ENST00000490561 SLC25A37Q9NYZ2 338 aa12.35□□□□□ -0.43
SNX12-205ENST00000490561 SLAMF8Q9P0V8 285 aa12.35□□□□□ -0.43
SNX12-205ENST00000490561 ANGPTL2Q9UKU9 493 aa12.35□□□□□ -0.43
SNX12-205ENST00000490561 FAF1Q9UNN5 650 aaPredicted RBP12.35□□□□□ -0.43
SNX12-205ENST00000490561 ERVK-19Q9WJR5 959 aa12.35□□□□□ -0.43
SNX12-205ENST00000490561 HS3ST3B1Q9Y662 390 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms