RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 CDC40O60508 579 aaKnown RBP eCLIP12.47□□□□□ -0.41
LMO4-203ENST00000489303 SPAG7O75391 227 aa12.47□□□□□ -0.41
LMO4-203ENST00000489303 RSL1D1O76021 490 aaKnown RBP12.47□□□□□ -0.41
LMO4-203ENST00000489303 ATP1B1P05026 303 aa12.47□□□□□ -0.41
LMO4-203ENST00000489303 RFC3P40938 356 aa12.47□□□□□ -0.41
LMO4-203ENST00000489303 CA7P43166 264 aa12.47□□□□□ -0.41
LMO4-203ENST00000489303 TMED10P49755 219 aaKnown RBP12.47□□□□□ -0.41
LMO4-203ENST00000489303 NR0B1P51843 470 aaKnown RBP12.47□□□□□ -0.41
LMO4-203ENST00000489303 FOXA1P55317 472 aa12.47□□□□□ -0.41
LMO4-203ENST00000489303 ZNF763Q0D2J5 394 aa12.47□□□□□ -0.41
LMO4-203ENST00000489303 PCLAFQ15004 111 aa12.47□□□□□ -0.41
LMO4-203ENST00000489303 KRT71Q3SY84 523 aa12.47□□□□□ -0.41
LMO4-203ENST00000489303 SLC22A10Q63ZE4 541 aa12.47□□□□□ -0.41
LMO4-203ENST00000489303 GALNT18Q6P9A2 607 aa12.47□□□□□ -0.41
LMO4-203ENST00000489303 TRIM46Q7Z4K8 759 aa12.47□□□□□ -0.41
LMO4-203ENST00000489303 SLC22A16Q86VW1 577 aa12.47□□□□□ -0.41
LMO4-203ENST00000489303 SPPL2CQ8IUH8 684 aa12.47□□□□□ -0.41
LMO4-203ENST00000489303 EID3Q8N140 333 aa12.47□□□□□ -0.41
LMO4-203ENST00000489303 FAM13CQ8NE31 585 aa12.47□□□□□ -0.41
LMO4-203ENST00000489303 OR2M7Q8NG81 312 aa12.47□□□□□ -0.41
LMO4-203ENST00000489303 C16orf52Q8NHV5 167 aa12.47□□□□□ -0.41
LMO4-203ENST00000489303 CDC26Q8NHZ8 85 aa12.47□□□□□ -0.41
LMO4-203ENST00000489303 FAM76AQ8TAV0 307 aa12.47□□□□□ -0.41
LMO4-203ENST00000489303 C16orf78Q8WTQ4 265 aa12.47□□□□□ -0.41
LMO4-203ENST00000489303 SPACA9Q96E40 222 aaPredicted RBP12.47□□□□□ -0.41
LMO4-203ENST00000489303 TMEM109Q9BVC6 243 aa12.47□□□□□ -0.41
LMO4-203ENST00000489303 GATA5Q9BWX5 397 aaPredicted RBP12.47□□□□□ -0.41
LMO4-203ENST00000489303 EBPLQ9BY08 206 aa12.47□□□□□ -0.41
LMO4-203ENST00000489303 SIRT5Q9NXA8 310 aa12.47□□□□□ -0.41
LMO4-203ENST00000489303 BCAP29Q9UHQ4 241 aa12.47□□□□□ -0.41
LMO4-203ENST00000489303 CREBBPQ92793 2442 aa12.46□□□□□ -0.41
LMO4-203ENST00000489303 A0A1W2PS29 197 aa12.46□□□□□ -0.41
LMO4-203ENST00000489303 PRRG2O14669 202 aa12.46□□□□□ -0.41
LMO4-203ENST00000489303 TP53I11O14683 189 aa12.46□□□□□ -0.41
LMO4-203ENST00000489303 AZIN1O14977 448 aa12.46□□□□□ -0.41
LMO4-203ENST00000489303 RGS16O15492 202 aaPredicted RBP12.46□□□□□ -0.41
LMO4-203ENST00000489303 HS6ST1O60243 411 aa12.46□□□□□ -0.41
LMO4-203ENST00000489303 NPHS1O60500 1241 aa12.46□□□□□ -0.41
LMO4-203ENST00000489303 BCAS2O75934 225 aaPredicted RBP12.46□□□□□ -0.41
LMO4-203ENST00000489303 FBXO45P0C2W1 286 aa12.46□□□□□ -0.41
LMO4-203ENST00000489303 CT62P0C5K7 136 aa12.46□□□□□ -0.41
LMO4-203ENST00000489303 ALDH3A1P30838 453 aa12.46□□□□□ -0.41
LMO4-203ENST00000489303 PPIAP62937 165 aaKnown RBP12.46□□□□□ -0.41
LMO4-203ENST00000489303 RPP38P78345 283 aaKnown RBP12.46□□□□□ -0.41
LMO4-203ENST00000489303 RAE1P78406 368 aaKnown RBP12.46□□□□□ -0.41
LMO4-203ENST00000489303 MAP4K2Q12851 820 aa12.46□□□□□ -0.41
LMO4-203ENST00000489303 ZNF791Q3KP31 576 aaPredicted RBP12.46□□□□□ -0.41
LMO4-203ENST00000489303 RNFT1Q5M7Z0 435 aa12.46□□□□□ -0.41
LMO4-203ENST00000489303 FAM219BQ5XKK7 198 aa12.46□□□□□ -0.41
LMO4-203ENST00000489303 SP5Q6BEB4 398 aaPredicted RBP12.46□□□□□ -0.41
LMO4-203ENST00000489303 CROCCP2Q86T23 111 aa12.46□□□□□ -0.41
LMO4-203ENST00000489303 TICAM1Q8IUC6 712 aa12.46□□□□□ -0.41
LMO4-203ENST00000489303 MMP21Q8N119 569 aa12.46□□□□□ -0.41
LMO4-203ENST00000489303 TCP10LQ8TDR4 215 aa12.46□□□□□ -0.41
LMO4-203ENST00000489303 EXOSC8Q96B26 276 aaKnown RBP12.46□□□□□ -0.41
LMO4-203ENST00000489303 METTL2AQ96IZ6 378 aaKnown RBP12.46□□□□□ -0.41
LMO4-203ENST00000489303 MIEF1Q9NQG6 463 aa12.46□□□□□ -0.41
LMO4-203ENST00000489303 EHD3Q9NZN3 535 aa12.46□□□□□ -0.41
LMO4-203ENST00000489303 CNIH4Q9P003 139 aa12.46□□□□□ -0.41
LMO4-203ENST00000489303 PRODH2Q9UF12 536 aa12.46□□□□□ -0.41
LMO4-203ENST00000489303 RAB21Q9UL25 225 aa12.46□□□□□ -0.41
LMO4-203ENST00000489303 WBP11Q9Y2W2 641 aaKnown RBP12.46□□□□□ -0.41
LMO4-203ENST00000489303 FIS1Q9Y3D6 152 aa12.46□□□□□ -0.41
LMO4-203ENST00000489303 FBN2P35556 2912 aa12.45□□□□□ -0.42
LMO4-203ENST00000489303 FAM166BA8MTA8 275 aa12.45□□□□□ -0.42
LMO4-203ENST00000489303 G3V3Y1 287 aa12.45□□□□□ -0.42
LMO4-203ENST00000489303 ZNF354AO60765 605 aaPredicted RBP12.45□□□□□ -0.42
LMO4-203ENST00000489303 SEC22BO75396 215 aa12.45□□□□□ -0.42
LMO4-203ENST00000489303 NADKO95544 446 aaPredicted RBP12.45□□□□□ -0.42
LMO4-203ENST00000489303 CLPSP04118 112 aa12.45□□□□□ -0.42
LMO4-203ENST00000489303 CCL3P10147 92 aa12.45□□□□□ -0.42
LMO4-203ENST00000489303 NEFHP12036 1026 aa12.45□□□□□ -0.42
LMO4-203ENST00000489303 DDCP20711 480 aa12.45□□□□□ -0.42
LMO4-203ENST00000489303 MPIP34949 423 aa12.45□□□□□ -0.42
LMO4-203ENST00000489303 SERPINB5P36952 375 aa12.45□□□□□ -0.42
LMO4-203ENST00000489303 KCNJ2P63252 427 aa12.45□□□□□ -0.42
LMO4-203ENST00000489303 C2orf80Q0P641 193 aa12.45□□□□□ -0.42
LMO4-203ENST00000489303 PRICKLE4Q2TBC4 344 aa12.45□□□□□ -0.42
LMO4-203ENST00000489303 CLEC6AQ6EIG7 209 aa12.45□□□□□ -0.42
LMO4-203ENST00000489303 ARHGAP11AQ6P4F7 1023 aa12.45□□□□□ -0.42
LMO4-203ENST00000489303 FAM111BQ6SJ93 734 aa12.45□□□□□ -0.42
LMO4-203ENST00000489303 Q6ZPB1 254 aaPredicted RBP12.45□□□□□ -0.42
LMO4-203ENST00000489303 CCDC116Q8IYX3 515 aa12.45□□□□□ -0.42
LMO4-203ENST00000489303 ZNF615Q8N8J6 731 aa12.45□□□□□ -0.42
LMO4-203ENST00000489303 C17orf47Q8NEP4 570 aa12.45□□□□□ -0.42
LMO4-203ENST00000489303 PPP1R14CQ8TAE6 165 aa12.45□□□□□ -0.42
LMO4-203ENST00000489303 PAQR8Q8TEZ7 354 aa12.45□□□□□ -0.42
LMO4-203ENST00000489303 MARVELD3Q96A59 401 aa12.45□□□□□ -0.42
LMO4-203ENST00000489303 CNRIP1Q96F85 164 aaPredicted RBP12.45□□□□□ -0.42
LMO4-203ENST00000489303 BBS4Q96RK4 519 aa12.45□□□□□ -0.42
LMO4-203ENST00000489303 TTTY12Q9BZ98 90 aa12.45□□□□□ -0.42
LMO4-203ENST00000489303 IL1RL2Q9HB29 575 aa12.45□□□□□ -0.42
LMO4-203ENST00000489303 SLC35C2Q9NQQ7 365 aa12.45□□□□□ -0.42
LMO4-203ENST00000489303 DEPPQ9NTK1 212 aa12.45□□□□□ -0.42
LMO4-203ENST00000489303 MAT2BQ9NZL9 334 aa12.45□□□□□ -0.42
LMO4-203ENST00000489303 SLC17A7Q9P2U7 560 aa12.45□□□□□ -0.42
LMO4-203ENST00000489303 HEY2Q9UBP5 337 aa12.45□□□□□ -0.42
LMO4-203ENST00000489303 BOKQ9UMX3 212 aaPredicted RBP12.45□□□□□ -0.42
LMO4-203ENST00000489303 ZNF835Q9Y2P0 537 aa12.45□□□□□ -0.42
LMO4-203ENST00000489303 POLR3HQ9Y535 204 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms