RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 PRDM7Q9NQW5 492 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 PLSCR4Q9NRQ2 329 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 INTS10Q9NVR2 710 aaKnown RBP6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 WHRNQ9P202 907 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 EXO1Q9UQ84 846 aaKnown RBP6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 ALPK2Q86TB3 2170 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 MED12Q93074 2177 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 KMT2CQ8NEZ4 4911 aaKnown RBP6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 DYSFO75923 2080 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 HEATR5AQ86XA9 2040 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 A0A088AWK7 358 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 IQANK1A0A1B0GTG1 560 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 SMTNL1A8MU46 457 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 CAPN14A8MX76 684 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 E7EVH7 732 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 CLOCKO15516 846 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 FGF17O60258 216 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 KIAA0513O60268 411 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 DLX3O60479 287 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 CDH16O75309 829 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 CBR3O75828 277 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 VENTXO95231 258 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 APRTP07741 180 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 HIST1H2AGP0C0S8 130 aaPredicted RBP6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 COX7A2P14406 83 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 HIST1H2ADP20671 130 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 ZNF10P21506 573 aaPredicted RBP6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 CERS1P27544 350 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 STIP1P31948 543 aaKnown RBP6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 PTGDSP41222 190 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 IRX1P78414 480 aaPredicted RBP6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 TIAL1Q01085 375 aaKnown RBP eCLIP6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 GPS1Q13098 491 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 SP140Q13342 867 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 FGFBP1Q14512 234 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 CYP1B1Q16678 543 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 EXOC3L2Q2M3D2 409 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 C11orf63Q6NUN7 778 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 CASC4Q6P4E1 433 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 TMEM81Q6P7N7 255 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 TRIM40Q6P9F5 258 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 AAGABQ6PD74 315 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 SLC29A4Q7RTT9 530 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 P4HA3Q7Z4N8 544 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 IFNEQ86WN2 208 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 OR4N5Q8IXE1 308 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 ZNF525Q8N782 197 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 SEMA6DQ8NFY4 1073 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 OR2L5Q8NG80 312 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 OR14L1PQ8NHC6 308 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 C10orf105Q8TEF2 133 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 DOK4Q8TEW6 326 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 FIG4Q92562 907 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 ALG3Q92685 438 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 RHBDF1Q96CC6 855 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 HIST1H2AHQ96KK5 128 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 DNAJC7Q99615 494 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 HIST1H2AJQ99878 128 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 MAPKAP1Q9BPZ7 522 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 H2AFJQ9BTM1 129 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 TRIM2Q9C040 744 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 ACTR6Q9GZN1 396 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 REXO4Q9GZR2 422 aaKnown RBP6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 NAT10Q9H0A0 1025 aaKnown RBP6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 OR10A4Q9H209 315 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 MANSC1Q9H8J5 431 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 NHEJ1Q9H9Q4 299 aaPredicted RBP6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 LYRM4Q9HD34 91 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 SERHLQ9NQF3 203 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 TAS2R10Q9NYW0 307 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 PROCRQ9UNN8 238 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 NINQ8N4C6 2090 aa6.57□□□□□ -1.36
SPTLC1-205ENST00000477888 A0A0A6YYJ9 748 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 C2orf92A0A1B0GVN3 265 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 GRID2IPA4D2P6 1211 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 OR6C76A6NM76 312 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 SLCO1B7G3V0H7 640 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 CDC7O00311 574 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 TMPRSS2O15393 492 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 DYRK3O43781 588 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 ZIC3O60481 467 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 ICOSLGO75144 302 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 TNFRSF21O75509 655 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 CLEC3AO75596 197 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 CD3EP07766 207 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 ABCB1P08183 1280 aaPredicted RBP6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 RHOXF2BP0C7M4 288 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 IL11P20809 199 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 NPY2RP49146 381 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 RWDD2BP57060 319 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 HERVK_113P63132 956 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 ERVK-8P63133 956 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 ZNF844Q08AG5 666 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 KLF1Q13351 362 aaPredicted RBP6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 ZNF267Q14586 743 aaPredicted RBP6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 SETDB1Q15047 1291 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 CR1LQ2VPA4 569 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 KBTBD12Q3ZCT8 623 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 MIDNQ504T8 468 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms