RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 NUBPLQ8TB37 319 aa8.98□□□□□ -0.97
HDAC3-208ENST00000476739 KAT2AQ92830 837 aa8.98□□□□□ -0.97
HDAC3-208ENST00000476739 CTHRC1Q96CG8 243 aa8.98□□□□□ -0.97
HDAC3-208ENST00000476739 SCMH1Q96GD3 660 aa8.98□□□□□ -0.97
HDAC3-208ENST00000476739 METTL2AQ96IZ6 378 aaKnown RBP8.98□□□□□ -0.97
HDAC3-208ENST00000476739 ART5Q96L15 291 aa8.98□□□□□ -0.97
HDAC3-208ENST00000476739 GAL3ST4Q96RP7 486 aa8.98□□□□□ -0.97
HDAC3-208ENST00000476739 RASL10BQ96S79 203 aa8.98□□□□□ -0.97
HDAC3-208ENST00000476739 NUF2Q9BZD4 464 aa8.98□□□□□ -0.97
HDAC3-208ENST00000476739 OR10A5Q9H207 317 aa8.98□□□□□ -0.97
HDAC3-208ENST00000476739 MANSC1Q9H8J5 431 aa8.98□□□□□ -0.97
HDAC3-208ENST00000476739 TRIM45Q9H8W5 580 aaPredicted RBP8.98□□□□□ -0.97
HDAC3-208ENST00000476739 PFDN4Q9NQP4 134 aa8.98□□□□□ -0.97
HDAC3-208ENST00000476739 KLHL1Q9NR64 748 aa8.98□□□□□ -0.97
HDAC3-208ENST00000476739 EHD3Q9NZN3 535 aa8.98□□□□□ -0.97
HDAC3-208ENST00000476739 ABI3Q9P2A4 366 aa8.98□□□□□ -0.97
HDAC3-208ENST00000476739 COPS7AQ9UBW8 275 aa8.98□□□□□ -0.97
HDAC3-208ENST00000476739 PSME2Q9UL46 239 aa8.98□□□□□ -0.97
HDAC3-208ENST00000476739 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.98□□□□□ -0.97
HDAC3-208ENST00000476739 ZNF780BQ9Y6R6 833 aa8.98□□□□□ -0.97
HDAC3-208ENST00000476739 EML6Q6ZMW3 1958 aa8.98□□□□□ -0.97
HDAC3-208ENST00000476739 MYO1GB0I1T2 1018 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 J3QKU1 62 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 FCHO1O14526 889 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 DYRK3O43781 588 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 SP1P08047 785 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 KITP10721 976 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 GSTM5P46439 218 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 UQCRFS1P47985 274 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 CYB561P49447 251 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 SSR4P51571 173 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 CORO7P57737 925 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 FOXK1P85037 733 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 OCRLQ01968 901 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 MAP4K2Q12851 820 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 PTGR1Q14914 329 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 ATP6AP1LQ52LC2 224 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 IL23RQ5VWK5 629 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 RPUSD3Q6P087 351 aaKnown RBP8.97□□□□□ -0.97
HDAC3-208ENST00000476739 IL20RBQ6UXL0 311 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 TMEM64Q6YI46 380 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 IKBIPQ70UQ0 350 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 MAVSQ7Z434 540 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 GALNTL5Q7Z4T8 443 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 EGFL6Q8IUX8 553 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 VWA5B2Q8N398 1253 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 TMEM156Q8N614 296 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 ZNF441Q8N8Z8 693 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 OR52R1Q8NGF1 315 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 OR5L2Q8NGL0 311 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 C16orf52Q8NHV5 167 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 GRHL3Q8TE85 626 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 ZNF75CPQ92670 426 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-208ENST00000476739 ADIPOR1Q96A54 375 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 CIDECQ96AQ7 238 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-208ENST00000476739 TUBGCP3Q96CW5 907 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 PPP3R2Q96LZ3 170 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 BARD1Q99728 777 aaKnown RBP8.97□□□□□ -0.97
HDAC3-208ENST00000476739 CCT7Q99832 543 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 WWTR1Q9GZV5 400 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 GLIPR2Q9H4G4 154 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 AKTIPQ9H8T0 292 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 MIEF1Q9NQG6 463 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 THAP1Q9NVV9 213 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 MAP10Q9P2G4 905 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 MARCOQ9UEW3 520 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-208ENST00000476739 ENTPD4Q9Y227 616 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 YARS2Q9Y2Z4 477 aaKnown RBP8.97□□□□□ -0.97
HDAC3-208ENST00000476739 TMED5Q9Y3A6 229 aa8.97□□□□□ -0.97
HDAC3-208ENST00000476739 A8MVJ9 347 aa8.96□□□□□ -0.98
HDAC3-208ENST00000476739 HMGB1P1B2RPK0 211 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-208ENST00000476739 TCP11X1B4DZS4 312 aa8.96□□□□□ -0.98
HDAC3-208ENST00000476739 SLC25A12O75746 678 aa8.96□□□□□ -0.98
HDAC3-208ENST00000476739 G6PDP11413 515 aa8.96□□□□□ -0.98
HDAC3-208ENST00000476739 EFNA1P20827 205 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-208ENST00000476739 GPX3P22352 226 aa8.96□□□□□ -0.98
HDAC3-208ENST00000476739 EMDP50402 254 aa8.96□□□□□ -0.98
HDAC3-208ENST00000476739 NR0B1P51843 470 aaKnown RBP8.96□□□□□ -0.98
HDAC3-208ENST00000476739 NCBP2P52298 156 aaKnown RBP eCLIP8.96□□□□□ -0.98
HDAC3-208ENST00000476739 DIO3P55073 304 aa8.96□□□□□ -0.98
HDAC3-208ENST00000476739 PDE7AQ13946 482 aa8.96□□□□□ -0.98
HDAC3-208ENST00000476739 MAPKAPK3Q16644 382 aa8.96□□□□□ -0.98
HDAC3-208ENST00000476739 PIGGQ5H8A4 983 aa8.96□□□□□ -0.98
HDAC3-208ENST00000476739 FHL5Q5TD97 284 aa8.96□□□□□ -0.98
HDAC3-208ENST00000476739 SLC25A25Q6KCM7 469 aa8.96□□□□□ -0.98
HDAC3-208ENST00000476739 SLC29A4Q7RTT9 530 aa8.96□□□□□ -0.98
HDAC3-208ENST00000476739 ZNF551Q7Z340 670 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-208ENST00000476739 WDR75Q8IWA0 830 aaKnown RBP8.96□□□□□ -0.98
HDAC3-208ENST00000476739 CYP4Z2PQ8N1L4 340 aa8.96□□□□□ -0.98
HDAC3-208ENST00000476739 KRTCAP2Q8N6L1 136 aa8.96□□□□□ -0.98
HDAC3-208ENST00000476739 FNDC5Q8NAU1 212 aa8.96□□□□□ -0.98
HDAC3-208ENST00000476739 OR7G2Q8NG99 324 aa8.96□□□□□ -0.98
HDAC3-208ENST00000476739 OR7A2PQ8NGA2 310 aa8.96□□□□□ -0.98
HDAC3-208ENST00000476739 RAB3IL1Q8TBN0 382 aa8.96□□□□□ -0.98
HDAC3-208ENST00000476739 ZNF675Q8TD23 568 aa8.96□□□□□ -0.98
HDAC3-208ENST00000476739 ASB15Q8WXK1 588 aa8.96□□□□□ -0.98
HDAC3-208ENST00000476739 ITPAQ9BY32 194 aa8.96□□□□□ -0.98
HDAC3-208ENST00000476739 REEP4Q9H6H4 257 aa8.96□□□□□ -0.98
HDAC3-208ENST00000476739 MEAF6Q9HAF1 191 aa8.96□□□□□ -0.98
HDAC3-208ENST00000476739 DEPPQ9NTK1 212 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms