RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 NRG3P56975 720 aa21.21■□□□□ 0.99
PTPN4-208ENST00000460289 PCLAFQ15004 111 aa21.21■□□□□ 0.99
PTPN4-208ENST00000460289 CMPK2Q5EBM0 449 aa21.21■□□□□ 0.99
PTPN4-208ENST00000460289 LRRC25Q8N386 305 aaPredicted RBP21.21■□□□□ 0.99
PTPN4-208ENST00000460289 MREGQ8N565 214 aa21.21■□□□□ 0.99
PTPN4-208ENST00000460289 ZNF441Q8N8Z8 693 aa21.21■□□□□ 0.99
PTPN4-208ENST00000460289 C17orf47Q8NEP4 570 aa21.21■□□□□ 0.99
PTPN4-208ENST00000460289 PAQR8Q8TEZ7 354 aa21.21■□□□□ 0.99
PTPN4-208ENST00000460289 C16orf78Q8WTQ4 265 aa21.21■□□□□ 0.99
PTPN4-208ENST00000460289 CNRIP1Q96F85 164 aaPredicted RBP21.21■□□□□ 0.99
PTPN4-208ENST00000460289 ZNF681Q96N22 645 aa21.21■□□□□ 0.99
PTPN4-208ENST00000460289 SMC6Q96SB8 1091 aa21.21■□□□□ 0.99
PTPN4-208ENST00000460289 TTTY12Q9BZ98 90 aa21.21■□□□□ 0.99
PTPN4-208ENST00000460289 SH2D2AQ9NP31 389 aa21.21■□□□□ 0.99
PTPN4-208ENST00000460289 CNIH4Q9P003 139 aa21.21■□□□□ 0.99
PTPN4-208ENST00000460289 PINLYPA6NC86 204 aa21.2■□□□□ 0.98
PTPN4-208ENST00000460289 G3V3Y1 287 aa21.2■□□□□ 0.98
PTPN4-208ENST00000460289 CDC40O60508 579 aaKnown RBP eCLIP21.2■□□□□ 0.98
PTPN4-208ENST00000460289 HSF1Q00613 529 aa21.2■□□□□ 0.98
PTPN4-208ENST00000460289 MGAT2Q10469 447 aa21.2■□□□□ 0.98
PTPN4-208ENST00000460289 EID3Q8N140 333 aa21.2■□□□□ 0.98
PTPN4-208ENST00000460289 FAM13CQ8NE31 585 aa21.2■□□□□ 0.98
PTPN4-208ENST00000460289 OR52N2Q8NGI0 321 aa21.2■□□□□ 0.98
PTPN4-208ENST00000460289 FAM76AQ8TAV0 307 aa21.2■□□□□ 0.98
PTPN4-208ENST00000460289 CCDC120Q96HB5 630 aa21.2■□□□□ 0.98
PTPN4-208ENST00000460289 METTL2AQ96IZ6 378 aaKnown RBP21.2■□□□□ 0.98
PTPN4-208ENST00000460289 TMEM109Q9BVC6 243 aa21.2■□□□□ 0.98
PTPN4-208ENST00000460289 GATA5Q9BWX5 397 aaPredicted RBP21.2■□□□□ 0.98
PTPN4-208ENST00000460289 SHCBP1LQ9BZQ2 653 aa21.2■□□□□ 0.98
PTPN4-208ENST00000460289 IL1RL2Q9HB29 575 aa21.2■□□□□ 0.98
PTPN4-208ENST00000460289 PFDN4Q9NQP4 134 aa21.2■□□□□ 0.98
PTPN4-208ENST00000460289 GIMAP4Q9NUV9 329 aa21.2■□□□□ 0.98
PTPN4-208ENST00000460289 MAT2BQ9NZL9 334 aa21.2■□□□□ 0.98
PTPN4-208ENST00000460289 BCAP29Q9UHQ4 241 aa21.2■□□□□ 0.98
PTPN4-208ENST00000460289 TINAGQ9UJW2 476 aa21.2■□□□□ 0.98
PTPN4-208ENST00000460289 WBP11Q9Y2W2 641 aaKnown RBP21.2■□□□□ 0.98
PTPN4-208ENST00000460289 A0A1B0GTH9 108 aa21.19■□□□□ 0.98
PTPN4-208ENST00000460289 TP53I11O14683 189 aa21.19■□□□□ 0.98
PTPN4-208ENST00000460289 RSL1D1O76021 490 aaKnown RBP21.19■□□□□ 0.98
PTPN4-208ENST00000460289 GLSO94925 669 aaPredicted RBP21.19■□□□□ 0.98
PTPN4-208ENST00000460289 PTGS2P35354 604 aa21.19■□□□□ 0.98
PTPN4-208ENST00000460289 DNASE1L1P49184 302 aa21.19■□□□□ 0.98
PTPN4-208ENST00000460289 TMED10P49755 219 aaKnown RBP21.19■□□□□ 0.98
PTPN4-208ENST00000460289 NTRK2Q16620 822 aa21.19■□□□□ 0.98
PTPN4-208ENST00000460289 ARHGAP11AQ6P4F7 1023 aa21.19■□□□□ 0.98
PTPN4-208ENST00000460289 FAM111BQ6SJ93 734 aa21.19■□□□□ 0.98
PTPN4-208ENST00000460289 RPTNQ6XPR3 784 aa21.19■□□□□ 0.98
PTPN4-208ENST00000460289 CHERPQ8IWX8 916 aaKnown RBP21.19■□□□□ 0.98
PTPN4-208ENST00000460289 ADIPOR1Q96A54 375 aa21.19■□□□□ 0.98
PTPN4-208ENST00000460289 CTHRC1Q96CG8 243 aa21.19■□□□□ 0.98
PTPN4-208ENST00000460289 FAM111AQ96PZ2 611 aa21.19■□□□□ 0.98
PTPN4-208ENST00000460289 EBPLQ9BY08 206 aa21.19■□□□□ 0.98
PTPN4-208ENST00000460289 DEFB127Q9H1M4 99 aa21.19■□□□□ 0.98
PTPN4-208ENST00000460289 ZDHHC11Q9H8X9 412 aa21.19■□□□□ 0.98
PTPN4-208ENST00000460289 PLSCR2Q9NRY7 297 aa21.19■□□□□ 0.98
PTPN4-208ENST00000460289 EHD3Q9NZN3 535 aa21.19■□□□□ 0.98
PTPN4-208ENST00000460289 ZNF639Q9UID6 485 aa21.19■□□□□ 0.98
PTPN4-208ENST00000460289 NPFFR2Q9Y5X5 522 aa21.19■□□□□ 0.98
PTPN4-208ENST00000460289 MYO7BQ6PIF6 2116 aa21.19■□□□□ 0.98
PTPN4-208ENST00000460289 A0A0G2JMM0 328 aa21.18■□□□□ 0.98
PTPN4-208ENST00000460289 A0A1W2PPB8 328 aa21.18■□□□□ 0.98
PTPN4-208ENST00000460289 A0A1W2PRS3 328 aa21.18■□□□□ 0.98
PTPN4-208ENST00000460289 FAM166BA8MTA8 275 aa21.18■□□□□ 0.98
PTPN4-208ENST00000460289 KIR3DP1A8MWS1 328 aa21.18■□□□□ 0.98
PTPN4-208ENST00000460289 AZIN1O14977 448 aa21.18■□□□□ 0.98
PTPN4-208ENST00000460289 TUBBP07437 444 aa21.18■□□□□ 0.98
PTPN4-208ENST00000460289 PIGAP37287 484 aa21.18■□□□□ 0.98
PTPN4-208ENST00000460289 ZNF763Q0D2J5 394 aa21.18■□□□□ 0.98
PTPN4-208ENST00000460289 HYAL4Q2M3T9 481 aa21.18■□□□□ 0.98
PTPN4-208ENST00000460289 CCDC116Q8IYX3 515 aa21.18■□□□□ 0.98
PTPN4-208ENST00000460289 FBXW8Q8N3Y1 598 aa21.18■□□□□ 0.98
PTPN4-208ENST00000460289 ADCY4Q8NFM4 1077 aa21.18■□□□□ 0.98
PTPN4-208ENST00000460289 OR10G3Q8NGC4 313 aa21.18■□□□□ 0.98
PTPN4-208ENST00000460289 TCP10LQ8TDR4 215 aa21.18■□□□□ 0.98
PTPN4-208ENST00000460289 EXOSC8Q96B26 276 aaKnown RBP21.18■□□□□ 0.98
PTPN4-208ENST00000460289 ERP27Q96DN0 273 aa21.18■□□□□ 0.98
PTPN4-208ENST00000460289 TNFRSF12AQ9NP84 129 aa21.18■□□□□ 0.98
PTPN4-208ENST00000460289 PRODH2Q9UF12 536 aa21.18■□□□□ 0.98
PTPN4-208ENST00000460289 ENTPD4Q9Y227 616 aa21.18■□□□□ 0.98
PTPN4-208ENST00000460289 MEMO1Q9Y316 297 aa21.18■□□□□ 0.98
PTPN4-208ENST00000460289 CHCHD2Q9Y6H1 151 aaPredicted RBP21.18■□□□□ 0.98
PTPN4-208ENST00000460289 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.18■□□□□ 0.98
PTPN4-208ENST00000460289 CYSRT1A8MQ03 144 aa21.17■□□□□ 0.98
PTPN4-208ENST00000460289 SLC28A1O00337 649 aa21.17■□□□□ 0.98
PTPN4-208ENST00000460289 SPAG7O75391 227 aa21.17■□□□□ 0.98
PTPN4-208ENST00000460289 BCAS2O75934 225 aaPredicted RBP21.17■□□□□ 0.98
PTPN4-208ENST00000460289 PDE9AO76083 593 aa21.17■□□□□ 0.98
PTPN4-208ENST00000460289 CHEK2O96017 543 aa21.17■□□□□ 0.98
PTPN4-208ENST00000460289 GPX3P22352 226 aa21.17■□□□□ 0.98
PTPN4-208ENST00000460289 ALDH3A1P30838 453 aa21.17■□□□□ 0.98
PTPN4-208ENST00000460289 MPIP34949 423 aa21.17■□□□□ 0.98
PTPN4-208ENST00000460289 KCNJ2P63252 427 aa21.17■□□□□ 0.98
PTPN4-208ENST00000460289 C2orf80Q0P641 193 aa21.17■□□□□ 0.98
PTPN4-208ENST00000460289 FOXO1Q12778 655 aa21.17■□□□□ 0.98
PTPN4-208ENST00000460289 TBCELQ5QJ74 424 aa21.17■□□□□ 0.98
PTPN4-208ENST00000460289 CLEC6AQ6EIG7 209 aa21.17■□□□□ 0.98
PTPN4-208ENST00000460289 FAM180BQ6P0A1 224 aa21.17■□□□□ 0.98
PTPN4-208ENST00000460289 FGD2Q7Z6J4 655 aa21.17■□□□□ 0.98
PTPN4-208ENST00000460289 MRGPRGQ86SM5 289 aa21.17■□□□□ 0.98
PTPN4-208ENST00000460289 DOLPP1Q86YN1 238 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms