RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 FBXW10Q5XX13 1052 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 OR4C11Q6IEV9 310 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 GPRIN3Q6ZVF9 776 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 MRGPRGQ86SM5 289 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 GALNT12Q8IXK2 581 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 RNF175Q8N4F7 328 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 OR6Y1Q8NGX8 325 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 OR14A16Q8NHC5 309 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 TRPC4APQ8TEL6 797 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 ASB15Q8WXK1 588 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 ZDHHC16Q969W1 377 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 RHOVQ96L33 236 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 LIN28AQ9H9Z2 209 aaKnown RBP8.14□□□□□ -1.11
USP6NL-203ENST00000443016 NPHS2Q9NP85 383 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 PFDN4Q9NQP4 134 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 HPF1Q9NWY4 346 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 MS4A12Q9NXJ0 267 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 TINAGQ9UJW2 476 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 YARS2Q9Y2Z4 477 aaKnown RBP8.14□□□□□ -1.11
USP6NL-203ENST00000443016 RAP2CQ9Y3L5 183 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 GMNCA6NCL1 334 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 SLCO1B7G3V0H7 640 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 WWP2O00308 870 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 EDF1O60869 148 aaKnown RBP8.13□□□□□ -1.11
USP6NL-203ENST00000443016 WISP2O76076 250 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 ENO1P06733 434 aaKnown RBP8.13□□□□□ -1.11
USP6NL-203ENST00000443016 PTX3P26022 381 aaPredicted RBP8.13□□□□□ -1.11
USP6NL-203ENST00000443016 RFC3P40938 356 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 BUD31P41223 144 aaPredicted RBP8.13□□□□□ -1.11
USP6NL-203ENST00000443016 PIK3CBP42338 1070 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 GPR85P60893 370 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 OCRLQ01968 901 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 E2F2Q14209 437 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 ARL13AQ5H913 290 aaPredicted RBP8.13□□□□□ -1.11
USP6NL-203ENST00000443016 UBE3DQ7Z6J8 389 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 CPLX4Q7Z7G2 160 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 SPPL2CQ8IUH8 684 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 OR4N5Q8IXE1 308 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 GHDCQ8N2G8 530 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 CCDC120Q96HB5 630 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 SORBS1Q9BX66 1292 aaKnown RBP8.13□□□□□ -1.11
USP6NL-203ENST00000443016 RPF2Q9H7B2 306 aaKnown RBP8.13□□□□□ -1.11
USP6NL-203ENST00000443016 NOL11Q9H8H0 719 aaKnown RBP8.13□□□□□ -1.11
USP6NL-203ENST00000443016 MID1IP1Q9NPA3 183 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 TIMMDC1Q9NPL8 285 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 DMRT3Q9NQL9 472 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 KCMF1Q9P0J7 381 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 MYOTQ9UBF9 498 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 CLDN16Q9Y5I7 305 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 ERICH4A6NGS2 130 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 LRRC14BA6NHZ5 514 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 PEX1O43933 1283 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 CDC40O60508 579 aaKnown RBP eCLIP8.13□□□□□ -1.11
USP6NL-203ENST00000443016 UGDHO60701 494 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 ESRRBO95718 433 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 MEOX1P50221 254 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 GPR143P51810 404 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 CDH13P55290 713 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 RPS13P62277 151 aaKnown RBP8.13□□□□□ -1.11
USP6NL-203ENST00000443016 SH2D4BQ5SQS7 431 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 CYP20A1Q6UW02 462 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 IL20RBQ6UXL0 311 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 C16orf47Q6ZP98 133 aaPredicted RBP8.13□□□□□ -1.11
USP6NL-203ENST00000443016 MDGA2Q7Z553 956 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 GPR180Q86V85 440 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 MORN4Q8NDC4 146 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 C7orf57Q8NEG2 295 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 OR5L2Q8NGL0 311 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 AGAP11Q8TF27 550 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 PTPMT1Q8WUK0 201 aaPredicted RBP8.13□□□□□ -1.11
USP6NL-203ENST00000443016 NSUN5Q96P11 429 aaKnown RBP8.13□□□□□ -1.11
USP6NL-203ENST00000443016 DGAT2Q96PD7 388 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 SIKE1Q9BRV8 207 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 TRIM45Q9H8W5 580 aaPredicted RBP8.13□□□□□ -1.11
USP6NL-203ENST00000443016 FGFR1OP2Q9NVK5 253 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 PHF11Q9UIL8 331 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 ZNF223Q9UK11 482 aaPredicted RBP8.13□□□□□ -1.11
USP6NL-203ENST00000443016 PPIEQ9UNP9 301 aaKnown RBP8.13□□□□□ -1.11
USP6NL-203ENST00000443016 PKDREJQ9NTG1 2253 aa8.13□□□□□ -1.11
USP6NL-203ENST00000443016 SERTM1A2A2V5 107 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 H0YIV9 168 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 PRRG2O14669 202 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 PRKNO60260 465 aaPredicted RBP8.12□□□□□ -1.11
USP6NL-203ENST00000443016 LYPLA1O75608 230 aaPredicted RBP8.12□□□□□ -1.11
USP6NL-203ENST00000443016 SCELO95171 688 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 CLDN9O95484 217 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 HMOX2P30519 316 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 HSF1Q00613 529 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 PCDH1Q08174 1060 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 C3AR1Q16581 482 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 DESI1Q6ICB0 168 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 PLBD1Q6P4A8 553 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 RPTNQ6XPR3 784 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 ZNF227Q86WZ6 799 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 SULF2Q8IWU5 870 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 LRRC34Q8IZ02 419 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 ARMC10Q8N2F6 343 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 POGLUT1Q8NBL1 392 aa8.12□□□□□ -1.11
USP6NL-203ENST00000443016 PIWIL2Q8TC59 973 aaKnown RBP8.12□□□□□ -1.11
USP6NL-203ENST00000443016 SLC2A12Q8TD20 617 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms