RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 LINC00696Q6ZRV3 163 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 ZNF547Q8IVP9 402 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 SLC5A11Q8WWX8 675 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 REXO5Q96IC2 774 aaKnown RBP6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 QRFPRQ96P65 431 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 PKP4Q99569 1192 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 MROQ9BYG7 248 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 SMURF2Q9HAU4 748 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 VPS4AQ9UN37 437 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 SPTBP11277 2137 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 IGLV3-16A0A075B6K0 115 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 BOLA2-SMG1P6H3BVE0 249 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 TPST1O60507 370 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 GCM2O75603 506 aaPredicted RBP6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 C1orf105O95561 183 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 MPC1LP0DKB6 136 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 IL7RP16871 459 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 DDX5P17844 614 aaKnown RBP6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 CLK3P49761 638 aaKnown RBP6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 PGDP52209 483 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 KCNK10P57789 538 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 SLC35A2P78381 396 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 B4GALNT1Q00973 533 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 E2F2Q14209 437 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 NRROSQ86YC3 692 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 CENPSQ8N2Z9 138 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 ZADH2Q8N4Q0 377 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 TTLQ8NG68 377 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 CYGBQ8WWM9 190 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 SLC39A7Q92504 469 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 PPWD1Q96BP3 646 aaKnown RBP6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 SH3YL1Q96HL8 342 aaPredicted RBP6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 ALPK1Q96QP1 1244 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 CNPPD1Q9BV87 410 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 FUNDC2Q9BWH2 189 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 MIEF1Q9NQG6 463 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 SPHK1Q9NYA1 384 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 DNAJB9Q9UBS3 223 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 SH3BGRL2Q9UJC5 107 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 TMPRSS11EQ9UL52 423 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 ARHGEF33A8MVX0 844 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 B4E171 279 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 CLPXO76031 633 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 TSPAN7P41732 249 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 GDF5P43026 501 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 RPS15AP62244 130 aaKnown RBP6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 PCDH1Q08174 1060 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 CD300CQ08708 224 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 GTF2H2Q13888 395 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 PTGR1Q14914 329 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 SPDYE7PQ495Y7 208 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 CPZQ66K79 652 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 GTF2H2CQ6P1K8 395 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 TMIGD1Q6UXZ0 262 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 PAGE2Q7Z2X7 111 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 THAP5Q7Z6K1 395 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 THOC6Q86W42 341 aaKnown RBP6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 SLC22A15Q8IZD6 547 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 ABHD11Q8NFV4 315 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 OR2L8Q8NGY9 312 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 C9orf43Q8TAL5 461 aaPredicted RBP6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 DYNC2LI1Q8TCX1 351 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 RAB2BQ8WUD1 216 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 PEX11GQ96HA9 241 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 MAGED4Q96JG8 741 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 GAL3ST4Q96RP7 486 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 BCL7BQ9BQE9 202 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 DEFB126Q9BYW3 111 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 NXF2Q9GZY0 626 aaKnown RBP6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 SPRTNQ9H040 489 aaPredicted RBP6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 LHX9Q9NQ69 397 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 COPS7AQ9UBW8 275 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 PCDHB14Q9Y5E9 798 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 PCM1Q15154 2024 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 C5orf42Q9H799 3197 aa6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 FEZF1A0PJY2 475 aa6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 K7EPI3 171 aa6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 SLC1A7O00341 560 aa6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 NKX2-8O15522 239 aa6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 KLHL18O94889 574 aa6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 CPN2P22792 545 aa6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 ETV5P41161 510 aa6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 BUD31P41223 144 aaPredicted RBP6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 CDKN2CP42773 168 aa6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 PPP1CAP62136 330 aa6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 PLGLB1Q02325 96 aa6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 EMX1Q04741 257 aaPredicted RBP6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 ACSM2AQ08AH3 577 aa6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 LY6DQ14210 128 aa6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 MEP1AQ16819 746 aa6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 ADPRMQ3LIE5 342 aa6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 GTDC1Q4AE62 458 aa6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 GGTA1PQ4G0N0 100 aa6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 ZNF658BQ4V348 819 aaPredicted RBP6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 ATG9BQ674R7 924 aa6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 ACSM2BQ68CK6 577 aa6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 PWWP2BQ6NUJ5 590 aa6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 MED27Q6P2C8 311 aa6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 MBOAT1Q6ZNC8 495 aa6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 KLHDC8AQ8IYD2 350 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms