RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 SYCE1Q8N0S2 351 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 PYROXD2Q8N2H3 581 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 LIX1Q8N485 282 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 HDDC3Q8N4P3 179 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 FAM89BQ8N5H3 189 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 ZNF321PQ8N8H1 164 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 FAM133AQ8N9E0 248 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 MCUQ8NE86 351 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 NEK11Q8NG66 645 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 OR7G1Q8NGA0 311 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 OR4K1Q8NGD4 311 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 OR10Z1Q8NGY1 313 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 CFAP61Q8NHU2 1237 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 ANGPTL6Q8NI99 470 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 SPPL2AQ8TCT8 520 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 MRAPQ8TCY5 172 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 GANCQ8TET4 914 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 SCFD1Q8WVM8 642 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 ASZ1Q8WWH4 475 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 LPGAT1Q92604 370 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 SLC22A18Q96BI1 424 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 RMDN1Q96DB5 314 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 ERO1AQ96HE7 468 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 AK8Q96MA6 479 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 TCEANC2Q96MN5 208 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 ATP6V0BQ99437 205 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 PLIN2Q99541 437 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 CCDC77Q9BR77 488 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 MXD3Q9BW11 206 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 PINK1Q9BXM7 581 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 MRPL1Q9BYD6 325 aaKnown RBP1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 YTHDF1Q9BYJ9 559 aaKnown RBP1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 OCR1Q9BZK8 76 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 GBA3Q9H227 469 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 TPK1Q9H3S4 243 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 TRIM45Q9H8W5 580 aaPredicted RBP1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 NTN4Q9HB63 628 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 NEK6Q9HC98 313 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 MRPL40Q9NQ50 206 aaKnown RBP1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 FAM114A2Q9NRY5 505 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 HAUS2Q9NVX0 235 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 ZNF581Q9P0T4 197 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 DBF4Q9UBU7 674 aaPredicted RBP1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 ATP6V1HQ9UI12 483 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 CYTH4Q9UIA0 394 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 VPS28Q9UK41 221 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 ABT1Q9ULW3 272 aaKnown RBP1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 STX8Q9UNK0 236 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 AURKCQ9UQB9 309 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 ERVK-19Q9WJR5 959 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 NTNG1Q9Y2I2 539 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 NAALAD2Q9Y3Q0 740 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 FAM32AQ9Y421 112 aaKnown RBP1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 COL16A1Q07092 1604 aaPredicted RBP1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 MIA2Q96PC5 1412 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 EIF3AQ14152 1382 aaKnown RBP1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 ANKRD30AQ9BXX3 1397 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 KIF15Q9NS87 1388 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 TTC21AQ8NDW8 1320 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 PASKQ96RG2 1323 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 IGHV3-20A0A0C4DH32 117 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 LOC100506127A0A0U1RQW1 187 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 XKRY2A2RUG3 117 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 TMEM210A6NLX4 147 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 FAM220BPB1ANY3 271 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 E9PBE3 544 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 H0Y8G0 127 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 H0Y9J4 135 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 IFIT3O14879 490 aaKnown RBP1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 BET1O15155 118 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 PGRMC2O15173 223 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 TLX2O43763 284 aaPredicted RBP1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 SSX5O60225 188 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 MGRN1O60291 552 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 ECE2O60344 883 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 SUPT3HO75486 399 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 GMNNO75496 209 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 TOM1L1O75674 476 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 SNAPINO95295 136 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 CRYZL1O95825 349 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 OTCP00480 354 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 IFNB1P01574 187 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 IL6P05231 212 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 ADRB2P07550 413 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 DANCRP0C864 163 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 GSTT2P0CG29 244 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 GSTT2BP0CG30 244 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 KRT3P12035 628 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 IRF2P14316 349 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 MGMTP16455 207 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 IL11P20809 199 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 CASTP20810 708 aaKnown RBP1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 SYT1P21579 422 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 PTBP1P26599 531 aaKnown RBP eCLIP1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 PCGF2P35227 344 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 RFC2P35250 354 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 PSMB10P40306 273 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 PPP1R2P41236 205 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 SLC1A1P43005 524 aa1.71□□□□□ -2.14
RNU4-42P-201ENST00000364738 CCT3P49368 545 aaKnown RBP1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms