RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 ZNF16P17020 682 aaPredicted RBP14.17□□□□□ -0.14
CHD4-201ENST00000357008 TUBG1P23258 451 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 GNRHRP30968 328 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 CA5AP35218 305 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 HMGCLP35914 325 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 PRRT3Q5FWE3 981 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 SFRP4Q6FHJ7 346 aaPredicted RBP14.17□□□□□ -0.14
CHD4-201ENST00000357008 NXPE4Q6UWF7 544 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 CLECL1Q8IZS7 167 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 DTWD1Q8N5C7 304 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 NAXEQ8NCW5 288 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 OR4K5Q8NGD3 323 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 NDNFQ8TB73 568 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 TMEM125Q96AQ2 219 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.17□□□□□ -0.14
CHD4-201ENST00000357008 PAHP00439 452 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 PRKCAP17252 672 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 CLRN1P58418 232 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 BORAQ6PGQ7 559 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 LRRC25Q8N386 305 aaPredicted RBP14.17□□□□□ -0.14
CHD4-201ENST00000357008 TSTD1Q8NFU3 115 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 ZNF689Q96CS4 500 aaPredicted RBP14.17□□□□□ -0.14
CHD4-201ENST00000357008 F2RL3Q96RI0 385 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 GPRC5BQ9NZH0 403 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 KLHL9Q9P2J3 617 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 INTS6Q9UL03 887 aaKnown RBP14.17□□□□□ -0.14
CHD4-201ENST00000357008 PLATP00750 562 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 RPS26P62854 115 aaKnown RBP14.17□□□□□ -0.14
CHD4-201ENST00000357008 MICAQ29983 383 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 OR6C4Q8NGE1 309 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 OR5M3Q8NGP4 307 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 BRI3BPQ8WY22 251 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 PRTFDC1Q9NRG1 225 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 CAPZA1P52907 286 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 LRIT3Q3SXY7 679 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 NKAPLQ5M9Q1 402 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 ADAMTS19Q8TE59 1207 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 TMEM19Q96HH6 336 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 FIZ1Q96SL8 496 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 ENY2Q9NPA8 101 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 SACM1LQ9NTJ5 587 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 ZNF701Q9NV72 531 aaPredicted RBP14.17□□□□□ -0.14
CHD4-201ENST00000357008 KLHL21Q9UJP4 597 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 SORBS2O94875 1100 aaKnown RBP14.16□□□□□ -0.14
CHD4-201ENST00000357008 POLR2CP19387 275 aaPredicted RBP14.16□□□□□ -0.14
CHD4-201ENST00000357008 ACTBP60709 375 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 ACTG1P63261 375 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 TEAD2Q15562 447 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 TMEM35AQ53FP2 167 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 ALG10BQ5I7T1 473 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 BCL2L15Q5TBC7 163 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 AADACL4Q5VUY2 407 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 CNKSR3Q6P9H4 555 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 ZSCAN4Q8NAM6 433 aaPredicted RBP14.16□□□□□ -0.14
CHD4-201ENST00000357008 OR8K5Q8NH50 307 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 CD3GP09693 182 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 GNSP15586 552 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 HTR6P50406 440 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 ZNF33BQ06732 778 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 RNASE10Q5GAN6 216 aaKnown RBP14.16□□□□□ -0.14
CHD4-201ENST00000357008 TMEM107Q6UX40 140 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 UNC5DQ6UXZ4 953 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 GPRIN1Q7Z2K8 1008 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 TMPRSS9Q7Z410 1059 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 SYT14Q8NB59 555 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 IRF7Q92985 503 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 SRA1Q9HD15 236 aaKnown RBP14.16□□□□□ -0.14
CHD4-201ENST00000357008 HCRTR2O43614 444 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 VEGFDO43915 354 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 ADH1BP00325 375 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 CRYZQ08257 329 aaKnown RBP14.16□□□□□ -0.14
CHD4-201ENST00000357008 FGFBP1Q14512 234 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 ZNF792Q3KQV3 632 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 OR52E8Q6IFG1 317 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 SMARCD2Q92925 531 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 TXNRD2Q9NNW7 524 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 MRPL15Q9P015 296 aaKnown RBP14.16□□□□□ -0.14
CHD4-201ENST00000357008 EIF3FO00303 357 aaPredicted RBP14.16□□□□□ -0.14
CHD4-201ENST00000357008 GJB5O95377 273 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 IFNA5P01569 189 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 GPR4P46093 362 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 HSD11B2P80365 405 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 C3orf33Q6P1S2 294 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 MTFR2Q6P444 385 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 NPWQ8N729 165 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 ECHDC3Q96DC8 303 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 C19orf25Q9UFG5 118 aaPredicted RBP14.16□□□□□ -0.14
CHD4-201ENST00000357008 INSL6Q9Y581 213 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 ACRP10323 421 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 LAMP1P11279 417 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 AMY2BP19961 511 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 RORAP35398 523 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 GSG1LQ6UXU4 331 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 RANBP10Q6VN20 620 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 BEND4Q6ZU67 534 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 ERN2Q76MJ5 926 aaKnown RBP14.16□□□□□ -0.14
CHD4-201ENST00000357008 ARL14Q8N4G2 192 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 OR2T35Q8NGX2 323 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 BORCS8Q96FH0 119 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 SORT1Q99523 831 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms