RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 BEST1O76090 585 aa10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 POU6F2P78424 691 aaPredicted RBP10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 DACT2Q5SW24 774 aa10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 FUT10Q6P4F1 479 aa10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 MMAAQ8IVH4 418 aaKnown RBP10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 OR52E2Q8NGJ4 325 aa10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 PRR11Q96HE9 360 aaPredicted RBP10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 HAPLN3Q96S86 360 aa10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 DPH2Q9BQC3 489 aaPredicted RBP10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 DOHHQ9BU89 302 aa10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 EFCAB11Q9BUY7 163 aa10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 HRH4Q9H3N8 390 aa10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 GCM1Q9NP62 436 aa10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 GPR52Q9Y2T5 361 aa10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 CACNG2Q9Y698 323 aa10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 VNN1O95497 513 aa10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 JUNDP17535 347 aa10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 CAV2P51636 162 aa10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 RIDAP52758 137 aaKnown RBP10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 SOWAHAQ2M3V2 549 aa10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 VARS2Q5ST30 1063 aaKnown RBP10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 TXNRD3NBQ6F5E7 133 aa10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 TMEM107Q6UX40 140 aa10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 OR51T1Q8NGJ9 327 aa10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 OR51A7Q8NH64 312 aa10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 NR4A3Q92570 626 aa10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 ZNF419Q96HQ0 510 aaPredicted RBP10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 REEP4Q9H6H4 257 aa10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 LIPCP11150 499 aa10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 ACTA2P62736 377 aa10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 ACTG2P63267 376 aa10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 MAP2K5Q13163 448 aa10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 TTLL10Q6ZVT0 673 aa10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 OR13J1Q8NGT2 312 aa10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 OR4Q3Q8NH05 313 aa10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 DOK4Q8TEW6 326 aa10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 NTAN1Q96AB6 310 aa10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 TWNKQ96RR1 684 aa10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 CNN2Q99439 309 aaKnown RBP10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 OSBPL2Q9H1P3 480 aa10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 GOLGA4Q13439 2230 aaKnown RBP10.56□□□□□ -0.72
GTF3C1-201ENST00000356183 LYRM1O43325 122 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 LCMT2O60294 686 aaKnown RBP10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 CLN5O75503 358 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 EBLN1P0CF75 366 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 OXTRP30559 389 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 ACVRL1P37023 503 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 TIGD3Q6B0B8 471 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 ERN2Q76MJ5 926 aaKnown RBP10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 HOXB13Q92826 284 aaPredicted RBP10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 RBP7Q96R05 134 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 MAGED1Q9Y5V3 778 aaPredicted RBP10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 PTTG1O95997 202 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 SNHG28P0DPA3 235 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 ARL2P36404 184 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 CSNK2A1P68400 391 aaPredicted RBP10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 BEX5Q5H9J7 111 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 BORAQ6PGQ7 559 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 TMEM150AQ86TG1 271 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 ALDH16A1Q8IZ83 802 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 CSNK2A3Q8NEV1 391 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 TSPEARQ8WU66 669 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 SLC22A17Q8WUG5 538 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 C17orf62Q9BQA9 187 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 HAO2Q9NYQ3 351 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 PROZP22891 400 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 POU3F4P49335 361 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 HNRNPFP52597 415 aaKnown RBP10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 GABARAPL2P60520 117 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 ACTC1P68032 377 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 ACTA1P68133 377 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 LRRTM4Q86VH4 590 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 UTP4Q969X6 686 aaKnown RBP10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 SAT2Q96F10 170 aaPredicted RBP10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 LRR1Q96L50 414 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 PAPOLGQ9BWT3 736 aaKnown RBP10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 CCM2LQ9NUG4 571 aaPredicted RBP10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 SMOXQ9NWM0 555 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 DLGAP4Q9Y2H0 992 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 ATG4BQ9Y4P1 393 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 RIPK3Q9Y572 518 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 NUBP2Q9Y5Y2 271 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 HEXBP07686 556 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 PYCR1P32322 319 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 PITPNBP48739 271 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 KBTBD6Q86V97 674 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 IGFN1Q86VF2 1251 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 TXNDC5Q8NBS9 432 aaKnown RBP10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 PADI3Q9ULW8 664 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 CA5BQ9Y2D0 317 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 DCCP43146 1447 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 OR7A17O14581 309 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 UGT2B7P16662 529 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 ZNF84P51523 738 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 RPS24P62847 133 aaKnown RBP10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 MLC1Q15049 377 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 GDF6Q6KF10 455 aaPredicted RBP10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 IQCF1Q8N6M8 205 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 CMASQ8NFW8 434 aaPredicted RBP10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 NSUN5Q96P11 429 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms