RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 F2RL3Q96RI0 385 aa26.01■■□□□ 1.75
CBX4-201ENST00000269397 TREX2Q9BQ50 279 aaPredicted RBP26.01■■□□□ 1.75
CBX4-201ENST00000269397 PRR14Q9BWN1 585 aa26.01■■□□□ 1.75
CBX4-201ENST00000269397 SGPP1Q9BX95 441 aa26.01■■□□□ 1.75
CBX4-201ENST00000269397 B3GAT2Q9NPZ5 323 aa26.01■■□□□ 1.75
CBX4-201ENST00000269397 TRPV5Q9NQA5 729 aa26.01■■□□□ 1.75
CBX4-201ENST00000269397 PRAMEF27A3QJZ7 478 aa26.01■■□□□ 1.75
CBX4-201ENST00000269397 PITPNM1O00562 1244 aa26.01■■□□□ 1.75
CBX4-201ENST00000269397 WEE1P30291 646 aa26.01■■□□□ 1.75
CBX4-201ENST00000269397 MAP2K3P46734 347 aa26.01■■□□□ 1.75
CBX4-201ENST00000269397 RAB25P57735 213 aa26.01■■□□□ 1.75
CBX4-201ENST00000269397 BNC1Q01954 994 aa26.01■■□□□ 1.75
CBX4-201ENST00000269397 TRIQKQ629K1 86 aa26.01■■□□□ 1.75
CBX4-201ENST00000269397 SLC30A8Q8IWU4 369 aa26.01■■□□□ 1.75
CBX4-201ENST00000269397 GRPEL2Q8TAA5 225 aa26.01■■□□□ 1.75
CBX4-201ENST00000269397 XAGE5Q8WWM1 108 aa26.01■■□□□ 1.75
CBX4-201ENST00000269397 POLDIP3Q9BY77 421 aaKnown RBP26.01■■□□□ 1.75
CBX4-201ENST00000269397 SERHL2Q9H4I8 314 aa26.01■■□□□ 1.75
CBX4-201ENST00000269397 FBXW2Q9UKT8 454 aa26.01■■□□□ 1.75
CBX4-201ENST00000269397 CASKO14936 926 aa26■■□□□ 1.75
CBX4-201ENST00000269397 NR2F6P10588 404 aa26■■□□□ 1.75
CBX4-201ENST00000269397 MAPK12P53778 367 aa26■■□□□ 1.75
CBX4-201ENST00000269397 TMEM215Q68D42 235 aa26■■□□□ 1.75
CBX4-201ENST00000269397 SLC9B2Q86UD5 537 aa26■■□□□ 1.75
CBX4-201ENST00000269397 LHFPL3Q86UP9 236 aa26■■□□□ 1.75
CBX4-201ENST00000269397 TCEAL8Q8IYN2 117 aa26■■□□□ 1.75
CBX4-201ENST00000269397 ZNF557Q8N988 423 aaPredicted RBP26■■□□□ 1.75
CBX4-201ENST00000269397 OR9A1PQ8NGU1 263 aa26■■□□□ 1.75
CBX4-201ENST00000269397 RNFT2Q96EX2 444 aa26■■□□□ 1.75
CBX4-201ENST00000269397 WDR34Q96EX3 536 aa26■■□□□ 1.75
CBX4-201ENST00000269397 OR2AG1Q9H205 316 aa26■■□□□ 1.75
CBX4-201ENST00000269397 SF3B6Q9Y3B4 125 aaKnown RBP26■■□□□ 1.75
CBX4-201ENST00000269397 QSOX1O00391 747 aa26■■□□□ 1.75
CBX4-201ENST00000269397 NTN1O95631 604 aa26■■□□□ 1.75
CBX4-201ENST00000269397 ALAS2P22557 587 aa26■■□□□ 1.75
CBX4-201ENST00000269397 SNAPC3Q92966 411 aa26■■□□□ 1.75
CBX4-201ENST00000269397 SLC46A2Q9BY10 475 aa26■■□□□ 1.75
CBX4-201ENST00000269397 K7ESM1 405 aa25.99■■□□□ 1.75
CBX4-201ENST00000269397 SLC30A4O14863 429 aa25.99■■□□□ 1.75
CBX4-201ENST00000269397 SEC14L5O43304 696 aa25.99■■□□□ 1.75
CBX4-201ENST00000269397 IL12RB1P42701 662 aa25.99■■□□□ 1.75
CBX4-201ENST00000269397 ARPC4P59998 168 aa25.99■■□□□ 1.75
CBX4-201ENST00000269397 MAP4K2Q12851 820 aa25.99■■□□□ 1.75
CBX4-201ENST00000269397 IL18Q14116 193 aa25.99■■□□□ 1.75
CBX4-201ENST00000269397 DHRS1Q96LJ7 313 aa25.99■■□□□ 1.75
CBX4-201ENST00000269397 FUZQ9BT04 418 aa25.99■■□□□ 1.75
CBX4-201ENST00000269397 FNDC11Q9BVV2 318 aa25.99■■□□□ 1.75
CBX4-201ENST00000269397 ICKQ9UPZ9 632 aa25.99■■□□□ 1.75
CBX4-201ENST00000269397 WASHC1A8K0Z3 465 aa25.99■■□□□ 1.75
CBX4-201ENST00000269397 PDPK1O15530 556 aa25.99■■□□□ 1.75
CBX4-201ENST00000269397 ELFN1P0C7U0 828 aa25.99■■□□□ 1.75
CBX4-201ENST00000269397 WASH2PQ6VEQ5 465 aa25.99■■□□□ 1.75
CBX4-201ENST00000269397 TECPR1Q7Z6L1 1165 aa25.99■■□□□ 1.75
CBX4-201ENST00000269397 HDHD5Q9BXW7 423 aa25.99■■□□□ 1.75
CBX4-201ENST00000269397 ZSCAN32Q9NX65 697 aa25.99■■□□□ 1.75
CBX4-201ENST00000269397 ZNF780AO75290 641 aaPredicted RBP25.98■■□□□ 1.75
CBX4-201ENST00000269397 TBX6O95947 436 aaPredicted RBP25.98■■□□□ 1.75
CBX4-201ENST00000269397 DDCP20711 480 aa25.98■■□□□ 1.75
CBX4-201ENST00000269397 GAS1P54826 345 aa25.98■■□□□ 1.75
CBX4-201ENST00000269397 SLC7A9P82251 487 aa25.98■■□□□ 1.75
CBX4-201ENST00000269397 CNTN1Q12860 1018 aa25.98■■□□□ 1.75
CBX4-201ENST00000269397 RNLSQ5VYX0 342 aa25.98■■□□□ 1.75
CBX4-201ENST00000269397 LRRC56Q8IYG6 542 aaPredicted RBP25.98■■□□□ 1.75
CBX4-201ENST00000269397 TMED9Q9BVK6 235 aa25.98■■□□□ 1.75
CBX4-201ENST00000269397 TBC1D17Q9HA65 648 aa25.98■■□□□ 1.75
CBX4-201ENST00000269397 SIRT3Q9NTG7 399 aaPredicted RBP25.98■■□□□ 1.75
CBX4-201ENST00000269397 PLXNA2O75051 1894 aa25.98■■□□□ 1.75
CBX4-201ENST00000269397 A0A0G2JN53 185 aa25.98■■□□□ 1.75
CBX4-201ENST00000269397 LALBAP00709 142 aa25.98■■□□□ 1.75
CBX4-201ENST00000269397 CPN2P22792 545 aa25.98■■□□□ 1.75
CBX4-201ENST00000269397 RASSF5Q8WWW0 418 aa25.98■■□□□ 1.75
CBX4-201ENST00000269397 TRIM63Q969Q1 353 aa25.98■■□□□ 1.75
CBX4-201ENST00000269397 UPRTQ96BW1 309 aa25.98■■□□□ 1.75
CBX4-201ENST00000269397 FAM83CQ9BQN1 747 aa25.98■■□□□ 1.75
CBX4-201ENST00000269397 TRPC4Q9UBN4 977 aa25.98■■□□□ 1.75
CBX4-201ENST00000269397 PRKAB1Q9Y478 270 aa25.98■■□□□ 1.75
CBX4-201ENST00000269397 LOC102723532A0A0G2JNH3 316 aa25.97■■□□□ 1.75
CBX4-201ENST00000269397 TEX28O15482 410 aa25.97■■□□□ 1.75
CBX4-201ENST00000269397 MMP20O60882 483 aa25.97■■□□□ 1.75
CBX4-201ENST00000269397 AVPR1BP47901 424 aa25.97■■□□□ 1.75
CBX4-201ENST00000269397 CCDC85BQ15834 202 aaPredicted RBP25.97■■□□□ 1.75
CBX4-201ENST00000269397 ADIPOR2Q86V24 386 aa25.97■■□□□ 1.75
CBX4-201ENST00000269397 ZFAND1Q8TCF1 268 aa25.97■■□□□ 1.75
CBX4-201ENST00000269397 TM4SF18Q96CE8 201 aa25.97■■□□□ 1.75
CBX4-201ENST00000269397 FAM240BA0A1B0GVZ2 78 aa25.97■■□□□ 1.75
CBX4-201ENST00000269397 HLA-DMAP28067 261 aa25.97■■□□□ 1.75
CBX4-201ENST00000269397 CLEC12AQ5QGZ9 265 aa25.97■■□□□ 1.75
CBX4-201ENST00000269397 QSOX2Q6ZRP7 698 aa25.97■■□□□ 1.75
CBX4-201ENST00000269397 KIF18BQ86Y91 864 aa25.97■■□□□ 1.75
CBX4-201ENST00000269397 DEDD2Q8WXF8 326 aa25.97■■□□□ 1.75
CBX4-201ENST00000269397 OR5P2Q8WZ92 322 aa25.97■■□□□ 1.75
CBX4-201ENST00000269397 ZNF607Q96SK3 696 aa25.97■■□□□ 1.75
CBX4-201ENST00000269397 YIPF4Q9BSR8 244 aa25.97■■□□□ 1.75
CBX4-201ENST00000269397 MAN2C1Q9NTJ4 1040 aa25.97■■□□□ 1.75
CBX4-201ENST00000269397 MLLT1Q03111 559 aaPredicted RBP25.96■■□□□ 1.75
CBX4-201ENST00000269397 UBE3AQ05086 875 aa25.96■■□□□ 1.75
CBX4-201ENST00000269397 BTBD16Q32M84 506 aa25.96■■□□□ 1.75
CBX4-201ENST00000269397 LIPIQ6XZB0 460 aa25.96■■□□□ 1.75
CBX4-201ENST00000269397 IKBIPQ70UQ0 350 aa25.96■■□□□ 1.75
CBX4-201ENST00000269397 TMEM145Q8NBT3 493 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms