RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 CNPPD1Q9BV87 410 aa17.85■□□□□ 0.45
DDX39A-204ENST00000586558 DEFB126Q9BYW3 111 aa17.85■□□□□ 0.45
DDX39A-204ENST00000586558 GPR45Q9Y5Y3 372 aa17.85■□□□□ 0.45
DDX39A-204ENST00000586558 TRBV11-1A0A0K0K1C0 115 aa17.84■□□□□ 0.45
DDX39A-204ENST00000586558 ANKRD28O15084 1053 aa17.84■□□□□ 0.45
DDX39A-204ENST00000586558 IFI6P09912 130 aa17.84■□□□□ 0.45
DDX39A-204ENST00000586558 SOX11P35716 441 aa17.84■□□□□ 0.45
DDX39A-204ENST00000586558 FRKP42685 505 aaPredicted RBP17.84■□□□□ 0.45
DDX39A-204ENST00000586558 DUSP2Q05923 314 aa17.84■□□□□ 0.45
DDX39A-204ENST00000586558 FUT7Q11130 342 aa17.84■□□□□ 0.45
DDX39A-204ENST00000586558 RPS6KA2Q15349 733 aa17.84■□□□□ 0.45
DDX39A-204ENST00000586558 PRICKLE4Q2TBC4 344 aa17.84■□□□□ 0.45
DDX39A-204ENST00000586558 CPTPQ5TA50 214 aa17.84■□□□□ 0.45
DDX39A-204ENST00000586558 FAM180BQ6P0A1 224 aa17.84■□□□□ 0.45
DDX39A-204ENST00000586558 HSDL2Q6YN16 418 aa17.84■□□□□ 0.45
DDX39A-204ENST00000586558 CCDC116Q8IYX3 515 aa17.84■□□□□ 0.45
DDX39A-204ENST00000586558 ARMC10Q8N2F6 343 aa17.84■□□□□ 0.45
DDX39A-204ENST00000586558 KRTCAP2Q8N6L1 136 aa17.84■□□□□ 0.45
DDX39A-204ENST00000586558 LSM14AQ8ND56 463 aaKnown RBP17.84■□□□□ 0.45
DDX39A-204ENST00000586558 OR7G1Q8NGA0 311 aa17.84■□□□□ 0.45
DDX39A-204ENST00000586558 ZFP28Q8NHY6 868 aa17.84■□□□□ 0.45
DDX39A-204ENST00000586558 C9orf43Q8TAL5 461 aaPredicted RBP17.84■□□□□ 0.45
DDX39A-204ENST00000586558 SUN3Q8TAQ9 357 aa17.84■□□□□ 0.45
DDX39A-204ENST00000586558 ZNF721Q8TF20 911 aa17.84■□□□□ 0.45
DDX39A-204ENST00000586558 TESCQ96BS2 214 aa17.84■□□□□ 0.45
DDX39A-204ENST00000586558 COQ8BQ96D53 544 aa17.84■□□□□ 0.45
DDX39A-204ENST00000586558 ZBED6CLQ96FA7 236 aaPredicted RBP17.84■□□□□ 0.45
DDX39A-204ENST00000586558 ABHD17AQ96GS6 310 aa17.84■□□□□ 0.45
DDX39A-204ENST00000586558 AMDHD1Q96NU7 426 aa17.84■□□□□ 0.45
DDX39A-204ENST00000586558 EBF4Q9BQW3 602 aa17.84■□□□□ 0.45
DDX39A-204ENST00000586558 NUDT9Q9BW91 350 aa17.84■□□□□ 0.45
DDX39A-204ENST00000586558 ZNF552Q9H707 407 aaPredicted RBP17.84■□□□□ 0.45
DDX39A-204ENST00000586558 ACSS1Q9NUB1 689 aaPredicted RBP17.84■□□□□ 0.45
DDX39A-204ENST00000586558 MAT2BQ9NZL9 334 aa17.84■□□□□ 0.45
DDX39A-204ENST00000586558 DCTN4Q9UJW0 460 aa17.84■□□□□ 0.45
DDX39A-204ENST00000586558 ERVK-19Q9WJR5 959 aa17.84■□□□□ 0.45
DDX39A-204ENST00000586558 LOC400499M0QZD8 3231 aa17.83■□□□□ 0.44
DDX39A-204ENST00000586558 OR6C76A6NM76 312 aa17.83■□□□□ 0.44
DDX39A-204ENST00000586558 ZFAND5O76080 213 aa17.83■□□□□ 0.44
DDX39A-204ENST00000586558 NCBP2P52298 156 aaKnown RBP eCLIP17.83■□□□□ 0.44
DDX39A-204ENST00000586558 SRSF11Q05519 484 aaKnown RBP17.83■□□□□ 0.44
DDX39A-204ENST00000586558 MGAT2Q10469 447 aa17.83■□□□□ 0.44
DDX39A-204ENST00000586558 RAPSNQ13702 412 aa17.83■□□□□ 0.44
DDX39A-204ENST00000586558 PRSS53Q2L4Q9 553 aa17.83■□□□□ 0.44
DDX39A-204ENST00000586558 PDCD4Q53EL6 469 aaKnown RBP17.83■□□□□ 0.44
DDX39A-204ENST00000586558 ZNF385BQ569K4 471 aa17.83■□□□□ 0.44
DDX39A-204ENST00000586558 TMEM198Q66K66 360 aa17.83■□□□□ 0.44
DDX39A-204ENST00000586558 ANKRD26P1Q6NSI1 321 aa17.83■□□□□ 0.44
DDX39A-204ENST00000586558 ISLR2Q6UXK2 745 aa17.83■□□□□ 0.44
DDX39A-204ENST00000586558 RNF111Q6ZNA4 994 aa17.83■□□□□ 0.44
DDX39A-204ENST00000586558 KIF2BQ8N4N8 673 aa17.83■□□□□ 0.44
DDX39A-204ENST00000586558 OR7A2PQ8NGA2 310 aa17.83■□□□□ 0.44
DDX39A-204ENST00000586558 RFWD2Q8NHY2 731 aa17.83■□□□□ 0.44
DDX39A-204ENST00000586558 CTHRC1Q96CG8 243 aa17.83■□□□□ 0.44
DDX39A-204ENST00000586558 CHMP6Q96FZ7 201 aa17.83■□□□□ 0.44
DDX39A-204ENST00000586558 ZNF354BQ96LW1 612 aa17.83■□□□□ 0.44
DDX39A-204ENST00000586558 BHLHE41Q9C0J9 482 aaPredicted RBP17.83■□□□□ 0.44
DDX39A-204ENST00000586558 SDR39U1Q9NRG7 319 aaPredicted RBP17.83■□□□□ 0.44
DDX39A-204ENST00000586558 FAM53CQ9NYF3 392 aa17.83■□□□□ 0.44
DDX39A-204ENST00000586558 ZNF223Q9UK11 482 aaPredicted RBP17.83■□□□□ 0.44
DDX39A-204ENST00000586558 ZNF451Q9Y4E5 1061 aa17.83■□□□□ 0.44
DDX39A-204ENST00000586558 A0A0G2JND7 137 aa17.82■□□□□ 0.44
DDX39A-204ENST00000586558 A8MUI8 341 aa17.82■□□□□ 0.44
DDX39A-204ENST00000586558 E9PBE3 544 aa17.82■□□□□ 0.44
DDX39A-204ENST00000586558 LAMP1P11279 417 aa17.82■□□□□ 0.44
DDX39A-204ENST00000586558 MRPL19P49406 292 aaKnown RBP17.82■□□□□ 0.44
DDX39A-204ENST00000586558 SLC37A1P57057 533 aa17.82■□□□□ 0.44
DDX39A-204ENST00000586558 STX1BP61266 288 aa17.82■□□□□ 0.44
DDX39A-204ENST00000586558 MLC1Q15049 377 aa17.82■□□□□ 0.44
DDX39A-204ENST00000586558 LTB4RQ15722 352 aa17.82■□□□□ 0.44
DDX39A-204ENST00000586558 MPEG1Q2M385 716 aa17.82■□□□□ 0.44
DDX39A-204ENST00000586558 ZNF628Q5EBL2 1059 aa17.82■□□□□ 0.44
DDX39A-204ENST00000586558 ABHD17BQ5VST6 288 aa17.82■□□□□ 0.44
DDX39A-204ENST00000586558 SIRT6Q8N6T7 355 aa17.82■□□□□ 0.44
DDX39A-204ENST00000586558 EXD3Q8N9H8 876 aa17.82■□□□□ 0.44
DDX39A-204ENST00000586558 GLB1L3Q8NCI6 653 aaPredicted RBP17.82■□□□□ 0.44
DDX39A-204ENST00000586558 ADCY4Q8NFM4 1077 aa17.82■□□□□ 0.44
DDX39A-204ENST00000586558 OR8J2Q8NGG1 315 aa17.82■□□□□ 0.44
DDX39A-204ENST00000586558 OR5L2Q8NGL0 311 aa17.82■□□□□ 0.44
DDX39A-204ENST00000586558 OR9A2Q8NGT5 310 aa17.82■□□□□ 0.44
DDX39A-204ENST00000586558 TM9SF4Q92544 642 aa17.82■□□□□ 0.44
DDX39A-204ENST00000586558 THOC1Q96FV9 657 aaKnown RBP17.82■□□□□ 0.44
DDX39A-204ENST00000586558 LMF1Q96S06 567 aa17.82■□□□□ 0.44
DDX39A-204ENST00000586558 ZBTB18Q99592 522 aa17.82■□□□□ 0.44
DDX39A-204ENST00000586558 GLIPR2Q9H4G4 154 aa17.82■□□□□ 0.44
DDX39A-204ENST00000586558 CLMPQ9H6B4 373 aa17.82■□□□□ 0.44
DDX39A-204ENST00000586558 SLAMF7Q9NQ25 335 aa17.82■□□□□ 0.44
DDX39A-204ENST00000586558 ZIM2Q9NZV7 527 aa17.82■□□□□ 0.44
DDX39A-204ENST00000586558 PTGFRNQ9P2B2 879 aa17.82■□□□□ 0.44
DDX39A-204ENST00000586558 ZNF639Q9UID6 485 aa17.82■□□□□ 0.44
DDX39A-204ENST00000586558 MED13Q9UHV7 2174 aa17.81■□□□□ 0.44
DDX39A-204ENST00000586558 A0A087WV62 115 aa17.81■□□□□ 0.44
DDX39A-204ENST00000586558 HRKO00198 91 aa17.81■□□□□ 0.44
DDX39A-204ENST00000586558 CDK2AP1O14519 115 aa17.81■□□□□ 0.44
DDX39A-204ENST00000586558 ATXN7O15265 892 aaPredicted RBP17.81■□□□□ 0.44
DDX39A-204ENST00000586558 PLOD3O60568 738 aa17.81■□□□□ 0.44
DDX39A-204ENST00000586558 BCAS2O75934 225 aaPredicted RBP17.81■□□□□ 0.44
DDX39A-204ENST00000586558 CT62P0C5K7 136 aa17.81■□□□□ 0.44
DDX39A-204ENST00000586558 S1PR1P21453 382 aa17.81■□□□□ 0.44
DDX39A-204ENST00000586558 KIR3DL1P43629 444 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms