RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 LTB4RQ15722 352 aa17.11■□□□□ 0.33
RFFL-211ENST00000584541 SPRED3Q2MJR0 410 aa17.11■□□□□ 0.33
RFFL-211ENST00000584541 PRICKLE4Q2TBC4 344 aa17.11■□□□□ 0.33
RFFL-211ENST00000584541 COQ5Q5HYK3 327 aa17.11■□□□□ 0.33
RFFL-211ENST00000584541 PAPD4Q6PIY7 484 aaKnown RBP17.11■□□□□ 0.33
RFFL-211ENST00000584541 SLC2A7Q6PXP3 512 aa17.11■□□□□ 0.33
RFFL-211ENST00000584541 PPP1R32Q7Z5V6 425 aa17.11■□□□□ 0.33
RFFL-211ENST00000584541 VWA5B2Q8N398 1253 aa17.11■□□□□ 0.33
RFFL-211ENST00000584541 TRIML2Q8N7C3 387 aa17.11■□□□□ 0.33
RFFL-211ENST00000584541 ADCY4Q8NFM4 1077 aa17.11■□□□□ 0.33
RFFL-211ENST00000584541 DNAJB8Q8NHS0 232 aa17.11■□□□□ 0.33
RFFL-211ENST00000584541 C8orf44Q96CB5 159 aa17.11■□□□□ 0.33
RFFL-211ENST00000584541 TUBB6Q9BUF5 446 aa17.11■□□□□ 0.33
RFFL-211ENST00000584541 CXorf21Q9HAI6 301 aa17.11■□□□□ 0.33
RFFL-211ENST00000584541 C3orf14Q9HBI5 128 aa17.11■□□□□ 0.33
RFFL-211ENST00000584541 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.11■□□□□ 0.33
RFFL-211ENST00000584541 TAGLN3Q9UI15 199 aa17.11■□□□□ 0.33
RFFL-211ENST00000584541 VPS4AQ9UN37 437 aa17.11■□□□□ 0.33
RFFL-211ENST00000584541 SNX8Q9Y5X2 465 aa17.11■□□□□ 0.33
RFFL-211ENST00000584541 NUP214P35658 2090 aaPredicted RBP17.1■□□□□ 0.33
RFFL-211ENST00000584541 SAGE2PA6NJ88 616 aa17.1■□□□□ 0.33
RFFL-211ENST00000584541 MRASO14807 208 aa17.1■□□□□ 0.33
RFFL-211ENST00000584541 KCNH1O95259 989 aa17.1■□□□□ 0.33
RFFL-211ENST00000584541 IFI6P09912 130 aa17.1■□□□□ 0.33
RFFL-211ENST00000584541 SOAT1P35610 550 aa17.1■□□□□ 0.33
RFFL-211ENST00000584541 HBA1P69905 142 aa17.1■□□□□ 0.33
RFFL-211ENST00000584541 IL10RAQ13651 578 aa17.1■□□□□ 0.33
RFFL-211ENST00000584541 ZNF267Q14586 743 aaPredicted RBP17.1■□□□□ 0.33
RFFL-211ENST00000584541 SPDYE7PQ495Y7 208 aa17.1■□□□□ 0.33
RFFL-211ENST00000584541 ZNF628Q5EBL2 1059 aa17.1■□□□□ 0.33
RFFL-211ENST00000584541 REP15Q6BDI9 236 aa17.1■□□□□ 0.33
RFFL-211ENST00000584541 TMEM107Q6UX40 140 aa17.1■□□□□ 0.33
RFFL-211ENST00000584541 MORN4Q8NDC4 146 aa17.1■□□□□ 0.33
RFFL-211ENST00000584541 GTF2H4Q92759 462 aa17.1■□□□□ 0.33
RFFL-211ENST00000584541 KAT2AQ92830 837 aa17.1■□□□□ 0.33
RFFL-211ENST00000584541 CCNL2Q96S94 520 aaPredicted RBP17.1■□□□□ 0.33
RFFL-211ENST00000584541 CNPPD1Q9BV87 410 aa17.1■□□□□ 0.33
RFFL-211ENST00000584541 ZNF700Q9H0M5 742 aa17.1■□□□□ 0.33
RFFL-211ENST00000584541 EFCAB1Q9HAE3 211 aa17.1■□□□□ 0.33
RFFL-211ENST00000584541 ARL8BQ9NVJ2 186 aa17.1■□□□□ 0.33
RFFL-211ENST00000584541 MAT2BQ9NZL9 334 aa17.1■□□□□ 0.33
RFFL-211ENST00000584541 PTGFRNQ9P2B2 879 aa17.1■□□□□ 0.33
RFFL-211ENST00000584541 MAN2B2Q9Y2E5 1009 aa17.1■□□□□ 0.33
RFFL-211ENST00000584541 A0A096LPI6 279 aa17.09■□□□□ 0.33
RFFL-211ENST00000584541 IGHV1-45A0A0A0MS14 117 aa17.09■□□□□ 0.33
RFFL-211ENST00000584541 NSG1A0A0A6YYJ2 146 aa17.09■□□□□ 0.33
RFFL-211ENST00000584541 IGHV3-20A0A0C4DH32 117 aa17.09■□□□□ 0.33
RFFL-211ENST00000584541 ASPDHA6ND91 283 aa17.09■□□□□ 0.33
RFFL-211ENST00000584541 ZNF891A8MT65 544 aaPredicted RBP17.09■□□□□ 0.33
RFFL-211ENST00000584541 PLOD2O00469 737 aa17.09■□□□□ 0.33
RFFL-211ENST00000584541 SOCS6O14544 535 aa17.09■□□□□ 0.33
RFFL-211ENST00000584541 ERN1O75460 977 aaKnown RBP17.09■□□□□ 0.33
RFFL-211ENST00000584541 BCAS2O75934 225 aaPredicted RBP17.09■□□□□ 0.33
RFFL-211ENST00000584541 SEC24DO94855 1032 aaPredicted RBP17.09■□□□□ 0.33
RFFL-211ENST00000584541 ESRRAP11474 423 aaPredicted RBP17.09■□□□□ 0.33
RFFL-211ENST00000584541 PTGER1P34995 402 aa17.09■□□□□ 0.33
RFFL-211ENST00000584541 MC3RP41968 323 aa17.09■□□□□ 0.33
RFFL-211ENST00000584541 CDK9P50750 372 aaKnown RBP17.09■□□□□ 0.33
RFFL-211ENST00000584541 MNAT1P51948 309 aa17.09■□□□□ 0.33
RFFL-211ENST00000584541 PRR5P85299 388 aa17.09■□□□□ 0.33
RFFL-211ENST00000584541 NFYCQ13952 458 aa17.09■□□□□ 0.33
RFFL-211ENST00000584541 PAGE3Q5JUK9 113 aa17.09■□□□□ 0.33
RFFL-211ENST00000584541 FAM111BQ6SJ93 734 aa17.09■□□□□ 0.33
RFFL-211ENST00000584541 KIRREL2Q6UWL6 708 aa17.09■□□□□ 0.33
RFFL-211ENST00000584541 DGAT2L6Q6ZPD8 337 aa17.09■□□□□ 0.33
RFFL-211ENST00000584541 ZNF621Q6ZSS3 439 aa17.09■□□□□ 0.33
RFFL-211ENST00000584541 NDUFAF7Q7L592 441 aa17.09■□□□□ 0.33
RFFL-211ENST00000584541 MRGPREQ86SM8 312 aa17.09■□□□□ 0.33
RFFL-211ENST00000584541 DPP10Q8N608 796 aa17.09■□□□□ 0.33
RFFL-211ENST00000584541 ZSCAN1Q8NBB4 408 aa17.09■□□□□ 0.33
RFFL-211ENST00000584541 OR11G2Q8NGC1 345 aa17.09■□□□□ 0.33
RFFL-211ENST00000584541 GOT1L1Q8NHS2 421 aaPredicted RBP17.09■□□□□ 0.33
RFFL-211ENST00000584541 PSMA8Q8TAA3 256 aa17.09■□□□□ 0.33
RFFL-211ENST00000584541 PTPMT1Q8WUK0 201 aaPredicted RBP17.09■□□□□ 0.33
RFFL-211ENST00000584541 MOAP1Q96BY2 351 aa17.09■□□□□ 0.33
RFFL-211ENST00000584541 RCN3Q96D15 328 aa17.09■□□□□ 0.33
RFFL-211ENST00000584541 ELP4Q96EB1 424 aa17.09■□□□□ 0.33
RFFL-211ENST00000584541 FBXL20Q96IG2 436 aa17.09■□□□□ 0.33
RFFL-211ENST00000584541 NSL1Q96IY1 281 aa17.09■□□□□ 0.33
RFFL-211ENST00000584541 NPAS2Q99743 824 aa17.09■□□□□ 0.33
RFFL-211ENST00000584541 INPP5KQ9BT40 448 aa17.09■□□□□ 0.33
RFFL-211ENST00000584541 SERHLQ9NQF3 203 aa17.09■□□□□ 0.33
RFFL-211ENST00000584541 DDX18Q9NVP1 670 aaKnown RBP17.09■□□□□ 0.33
RFFL-211ENST00000584541 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.09■□□□□ 0.33
RFFL-211ENST00000584541 GID8Q9NWU2 228 aa17.09■□□□□ 0.33
RFFL-211ENST00000584541 COPS7AQ9UBW8 275 aa17.09■□□□□ 0.33
RFFL-211ENST00000584541 ERVK-19Q9WJR5 959 aa17.09■□□□□ 0.33
RFFL-211ENST00000584541 WDFY3Q8IZQ1 3526 aa17.08■□□□□ 0.33
RFFL-211ENST00000584541 A0A087WV62 115 aa17.08■□□□□ 0.32
RFFL-211ENST00000584541 A0A1W2PQ72 361 aa17.08■□□□□ 0.32
RFFL-211ENST00000584541 CDC14CA4D256 554 aa17.08■□□□□ 0.32
RFFL-211ENST00000584541 EBAG9O00559 213 aa17.08■□□□□ 0.32
RFFL-211ENST00000584541 FBP2O00757 339 aa17.08■□□□□ 0.32
RFFL-211ENST00000584541 AIM2O14862 343 aa17.08■□□□□ 0.32
RFFL-211ENST00000584541 EMC8O43402 210 aa17.08■□□□□ 0.32
RFFL-211ENST00000584541 PLOD3O60568 738 aa17.08■□□□□ 0.32
RFFL-211ENST00000584541 CT62P0C5K7 136 aa17.08■□□□□ 0.32
RFFL-211ENST00000584541 COX6A1P12074 109 aa17.08■□□□□ 0.32
RFFL-211ENST00000584541 UQCRC2P22695 453 aa17.08■□□□□ 0.32
RFFL-211ENST00000584541 EIF2S3P41091 472 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms