RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	CYP20A1	Q6UW02	462 aa		13.43	□□□□□ -0.26
ABR-223	ENST00000573895	C6orf89	Q6UWU4	347 aa		13.43	□□□□□ -0.26
ABR-223	ENST00000573895	CLNK	Q7Z7G1	428 aa		13.43	□□□□□ -0.26
ABR-223	ENST00000573895	NUDT13	Q86X67	352 aa		13.43	□□□□□ -0.26
ABR-223	ENST00000573895	SCUBE1	Q8IWY4	988 aa		13.43	□□□□□ -0.26
ABR-223	ENST00000573895	ZCCHC7	Q8N3Z6	543 aa	Known RBP	13.43	□□□□□ -0.26
ABR-223	ENST00000573895	LIX1	Q8N485	282 aa		13.43	□□□□□ -0.26
ABR-223	ENST00000573895	CISD2	Q8N5K1	135 aa	Known RBP	13.43	□□□□□ -0.26
ABR-223	ENST00000573895	ELP5	Q8TE02	316 aa		13.43	□□□□□ -0.26
ABR-223	ENST00000573895	TSPEAR	Q8WU66	669 aa		13.43	□□□□□ -0.26
ABR-223	ENST00000573895	CCDC106	Q9BWC9	280 aa		13.43	□□□□□ -0.26
ABR-223	ENST00000573895	COPS7B	Q9H9Q2	264 aa	Predicted RBP	13.43	□□□□□ -0.26
ABR-223	ENST00000573895	LYRM4	Q9HD34	91 aa		13.43	□□□□□ -0.26
ABR-223	ENST00000573895	ASF1B	Q9NVP2	202 aa		13.43	□□□□□ -0.26
ABR-223	ENST00000573895	GNG14	A0A1W2PPG7	69 aa		13.42	□□□□□ -0.26
ABR-223	ENST00000573895	SAGE2P	A6NJ88	616 aa		13.42	□□□□□ -0.26
ABR-223	ENST00000573895	FAM227A	F5H4B4	570 aa		13.42	□□□□□ -0.26
ABR-223	ENST00000573895	SAP18	O00422	153 aa	Known RBP	13.42	□□□□□ -0.26
ABR-223	ENST00000573895	CYR61	O00622	381 aa		13.42	□□□□□ -0.26
ABR-223	ENST00000573895	SLC22A3	O75751	556 aa		13.42	□□□□□ -0.26
ABR-223	ENST00000573895	ZIC2	O95409	532 aa	Predicted RBP	13.42	□□□□□ -0.26
ABR-223	ENST00000573895	WDPCP	O95876	746 aa		13.42	□□□□□ -0.26
ABR-223	ENST00000573895	G6PD	P11413	515 aa		13.42	□□□□□ -0.26
ABR-223	ENST00000573895	DDX5	P17844	614 aa	Known RBP	13.42	□□□□□ -0.26
ABR-223	ENST00000573895	PRPS1L1	P21108	318 aa		13.42	□□□□□ -0.26
ABR-223	ENST00000573895	HIST1H1T	P22492	207 aa	Predicted RBP	13.42	□□□□□ -0.26
ABR-223	ENST00000573895	ATP5A1	P25705	553 aa	Known RBP	13.42	□□□□□ -0.26
ABR-223	ENST00000573895	PRDX6	P30041	224 aa		13.42	□□□□□ -0.26
ABR-223	ENST00000573895	SSR2	P43308	183 aa		13.42	□□□□□ -0.26
ABR-223	ENST00000573895	LIM2	P55344	173 aa		13.42	□□□□□ -0.26
ABR-223	ENST00000573895	C21orf58	P58505	322 aa		13.42	□□□□□ -0.26
ABR-223	ENST00000573895	TAS2R50	P59544	299 aa		13.42	□□□□□ -0.26
ABR-223	ENST00000573895	BTG2	P78543	158 aa		13.42	□□□□□ -0.26
ABR-223	ENST00000573895	KLF10	Q13118	480 aa		13.42	□□□□□ -0.26
ABR-223	ENST00000573895	UBAP2L	Q14157	1087 aa	Known RBP	13.42	□□□□□ -0.26
ABR-223	ENST00000573895	KRT72	Q14CN4	511 aa		13.42	□□□□□ -0.26
ABR-223	ENST00000573895	MEP1A	Q16819	746 aa		13.42	□□□□□ -0.26
ABR-223	ENST00000573895	ACER2	Q5QJU3	275 aa		13.42	□□□□□ -0.26
ABR-223	ENST00000573895	IKBIP	Q70UQ0	350 aa		13.42	□□□□□ -0.26
ABR-223	ENST00000573895	FAM26E	Q8N5C1	309 aa		13.42	□□□□□ -0.26
ABR-223	ENST00000573895	FITM2	Q8N6M3	262 aa		13.42	□□□□□ -0.26
ABR-223	ENST00000573895	ACOT4	Q8N9L9	421 aa		13.42	□□□□□ -0.26
ABR-223	ENST00000573895	GLB1L3	Q8NCI6	653 aa	Predicted RBP	13.42	□□□□□ -0.26
ABR-223	ENST00000573895	ZBTB18	Q99592	522 aa		13.42	□□□□□ -0.26
ABR-223	ENST00000573895	C1orf50	Q9BV19	199 aa		13.42	□□□□□ -0.26
ABR-223	ENST00000573895	ZNF717	Q9BY31	904 aa	Predicted RBP	13.42	□□□□□ -0.26
ABR-223	ENST00000573895	NECTIN3	Q9NQS3	549 aa		13.42	□□□□□ -0.26
ABR-223	ENST00000573895	PPIE	Q9UNP9	301 aa	Known RBP	13.42	□□□□□ -0.26
ABR-223	ENST00000573895	DLGAP4	Q9Y2H0	992 aa		13.42	□□□□□ -0.26
ABR-223	ENST00000573895	POLR3H	Q9Y535	204 aa	Predicted RBP	13.42	□□□□□ -0.26
ABR-223	ENST00000573895	PCDHGB6	Q9Y5F9	930 aa		13.42	□□□□□ -0.26
ABR-223	ENST00000573895	CAPN7	Q9Y6W3	813 aa		13.42	□□□□□ -0.26
ABR-223	ENST00000573895	UTP20	O75691	2785 aa	Known RBP	13.41	□□□□□ -0.26
ABR-223	ENST00000573895		A0A0G2JN53	185 aa		13.41	□□□□□ -0.26
ABR-223	ENST00000573895	OR5H15	A6NDH6	313 aa		13.41	□□□□□ -0.26
ABR-223	ENST00000573895	CAPN14	A8MX76	684 aa		13.41	□□□□□ -0.26
ABR-223	ENST00000573895	CBX6	O95503	412 aa		13.41	□□□□□ -0.26
ABR-223	ENST00000573895	SDC1	P18827	310 aa		13.41	□□□□□ -0.26
ABR-223	ENST00000573895	MAOA	P21397	527 aa		13.41	□□□□□ -0.26
ABR-223	ENST00000573895	CERS1	P27544	350 aa		13.41	□□□□□ -0.26
ABR-223	ENST00000573895	TPP2	P29144	1249 aa	Predicted RBP	13.41	□□□□□ -0.26
ABR-223	ENST00000573895	RPL3	P39023	403 aa	Known RBP	13.41	□□□□□ -0.26
ABR-223	ENST00000573895	MAPK12	P53778	367 aa		13.41	□□□□□ -0.26
ABR-223	ENST00000573895	CLNS1A	P54105	237 aa	Known RBP	13.41	□□□□□ -0.26
ABR-223	ENST00000573895	ZNF763	Q0D2J5	394 aa		13.41	□□□□□ -0.26
ABR-223	ENST00000573895	SLAMF1	Q13291	335 aa		13.41	□□□□□ -0.26
ABR-223	ENST00000573895	MAPRE2	Q15555	327 aa		13.41	□□□□□ -0.26
ABR-223	ENST00000573895	ARMC10	Q8N2F6	343 aa		13.41	□□□□□ -0.26
ABR-223	ENST00000573895	SLC5A8	Q8N695	610 aa		13.41	□□□□□ -0.26
ABR-223	ENST00000573895	CATSPER1	Q8NEC5	780 aa		13.41	□□□□□ -0.26
ABR-223	ENST00000573895	OR1N1	Q8NGS0	311 aa		13.41	□□□□□ -0.26
ABR-223	ENST00000573895	C16orf78	Q8WTQ4	265 aa		13.41	□□□□□ -0.26
ABR-223	ENST00000573895	ERP27	Q96DN0	273 aa		13.41	□□□□□ -0.26
ABR-223	ENST00000573895	CMTM5	Q96DZ9	223 aa		13.41	□□□□□ -0.26
ABR-223	ENST00000573895	MTERF3	Q96E29	417 aa		13.41	□□□□□ -0.26
ABR-223	ENST00000573895	PRPF18	Q99633	342 aa	Known RBP	13.41	□□□□□ -0.26
ABR-223	ENST00000573895	DPY30	Q9C005	99 aa		13.41	□□□□□ -0.26
ABR-223	ENST00000573895	MYNN	Q9NPC7	610 aa		13.41	□□□□□ -0.26
ABR-223	ENST00000573895	PRTFDC1	Q9NRG1	225 aa		13.41	□□□□□ -0.26
ABR-223	ENST00000573895	LYAR	Q9NX58	379 aa	Known RBP	13.41	□□□□□ -0.26
ABR-223	ENST00000573895	MS4A12	Q9NXJ0	267 aa		13.41	□□□□□ -0.26
ABR-223	ENST00000573895	PLA2G3	Q9NZ20	509 aa		13.41	□□□□□ -0.26
ABR-223	ENST00000573895	KCMF1	Q9P0J7	381 aa		13.41	□□□□□ -0.26
ABR-223	ENST00000573895	ABI3	Q9P2A4	366 aa		13.41	□□□□□ -0.26
ABR-223	ENST00000573895	CLDN16	Q9Y5I7	305 aa		13.41	□□□□□ -0.26
ABR-223	ENST00000573895	SPACA6	W5XKT8	324 aa		13.41	□□□□□ -0.26
ABR-223	ENST00000573895		A0A0A6YYD5	115 aa		13.4	□□□□□ -0.26
ABR-223	ENST00000573895		A8MUI8	341 aa		13.4	□□□□□ -0.26
ABR-223	ENST00000573895	ANKRD28	O15084	1053 aa		13.4	□□□□□ -0.26
ABR-223	ENST00000573895	CTNS	O60931	367 aa		13.4	□□□□□ -0.26
ABR-223	ENST00000573895	EED	O75530	441 aa	Known RBP	13.4	□□□□□ -0.26
ABR-223	ENST00000573895	FAM58BP	P0C7Q3	252 aa		13.4	□□□□□ -0.26
ABR-223	ENST00000573895	DRD2	P14416	443 aa		13.4	□□□□□ -0.26
ABR-223	ENST00000573895	GNLY	P22749	145 aa		13.4	□□□□□ -0.26
ABR-223	ENST00000573895	PIK3R1	P27986	724 aa		13.4	□□□□□ -0.26
ABR-223	ENST00000573895	UQCRFS1	P47985	274 aa		13.4	□□□□□ -0.26
ABR-223	ENST00000573895	MNAT1	P51948	309 aa		13.4	□□□□□ -0.26
ABR-223	ENST00000573895	SRSF11	Q05519	484 aa	Known RBP	13.4	□□□□□ -0.26
ABR-223	ENST00000573895	BIK	Q13323	160 aa		13.4	□□□□□ -0.26
ABR-223	ENST00000573895	AGK	Q53H12	422 aa		13.4	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms